RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ROCK2O75116 1388 aaKnown RBP26.54■■□□□ 1.84
CCDC43-204ENST00000588687 ABCC6O95255 1503 aa26.54■■□□□ 1.84
CCDC43-204ENST00000588687 TTC21BQ7Z4L5 1316 aa26.53■■□□□ 1.84
CCDC43-204ENST00000588687 WDR17Q8IZU2 1322 aa26.53■■□□□ 1.84
CCDC43-204ENST00000588687 BCL9O00512 1426 aa26.52■■□□□ 1.84
CCDC43-204ENST00000588687 ARHGEF25Q86VW2 580 aa26.51■■□□□ 1.83
CCDC43-204ENST00000588687 CASZ1Q86V15 1759 aa26.51■■□□□ 1.83
CCDC43-204ENST00000588687 ZBTB7CA1YPR0 619 aa26.5■■□□□ 1.83
CCDC43-204ENST00000588687 C11orf95C9JLR9 678 aaPredicted RBP26.5■■□□□ 1.83
CCDC43-204ENST00000588687 SBNO2Q9Y2G9 1366 aa26.49■■□□□ 1.83
CCDC43-204ENST00000588687 CD163L1Q9NR16 1453 aa26.48■■□□□ 1.83
CCDC43-204ENST00000588687 TTC21AQ8NDW8 1320 aa26.47■■□□□ 1.83
CCDC43-204ENST00000588687 DDB1Q16531 1140 aa26.47■■□□□ 1.83
CCDC43-204ENST00000588687 TOM1L2Q6ZVM7 507 aa26.47■■□□□ 1.83
CCDC43-204ENST00000588687 PTF1AQ7RTS3 328 aa26.47■■□□□ 1.83
CCDC43-204ENST00000588687 ZNF692Q9BU19 519 aaPredicted RBP26.46■■□□□ 1.83
CCDC43-204ENST00000588687 NBPF14Q5TI25 921 aa26.45■■□□□ 1.82
CCDC43-204ENST00000588687 PLSCR1O15162 318 aa26.44■■□□□ 1.82
CCDC43-204ENST00000588687 MARCH10Q8NA82 808 aaPredicted RBP26.44■■□□□ 1.82
CCDC43-204ENST00000588687 KCNH5Q8NCM2 988 aa26.44■■□□□ 1.82
CCDC43-204ENST00000588687 ANO8Q9HCE9 1232 aaPredicted RBP26.43■■□□□ 1.82
CCDC43-204ENST00000588687 KTN1Q86UP2 1357 aaKnown RBP26.43■■□□□ 1.82
CCDC43-204ENST00000588687 CARD10Q9BWT7 1032 aa26.42■■□□□ 1.82
CCDC43-204ENST00000588687 TNS2Q63HR2 1409 aa26.41■■□□□ 1.82
CCDC43-204ENST00000588687 LTN1O94822 1766 aa26.41■■□□□ 1.82
CCDC43-204ENST00000588687 CDCA7Q9BWT1 371 aaPredicted RBP26.41■■□□□ 1.82
CCDC43-204ENST00000588687 BCL11BQ9C0K0 894 aaPredicted RBP26.41■■□□□ 1.82
CCDC43-204ENST00000588687 USP31Q70CQ4 1352 aa26.41■■□□□ 1.82
CCDC43-204ENST00000588687 NHSQ6T4R5 1651 aa26.4■■□□□ 1.82
CCDC43-204ENST00000588687 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
CCDC43-204ENST00000588687 SOX12O15370 315 aa26.38■■□□□ 1.81
CCDC43-204ENST00000588687 PROM2Q8N271 834 aa26.38■■□□□ 1.81
CCDC43-204ENST00000588687 UTRNP46939 3433 aa26.37■■□□□ 1.81
CCDC43-204ENST00000588687 CCDC7Q96M83 1385 aa26.37■■□□□ 1.81
CCDC43-204ENST00000588687 KCNQ2O43526 872 aa26.35■■□□□ 1.81
CCDC43-204ENST00000588687 SPON1Q9HCB6 807 aa26.35■■□□□ 1.81
CCDC43-204ENST00000588687 NINLQ9Y2I6 1382 aa26.34■■□□□ 1.81
CCDC43-204ENST00000588687 ERBB3P21860 1342 aa26.34■■□□□ 1.81
CCDC43-204ENST00000588687 PAPPAQ13219 1627 aa26.33■■□□□ 1.81
CCDC43-204ENST00000588687 MYOM1P52179 1685 aa26.32■■□□□ 1.8
CCDC43-204ENST00000588687 CSB-PGBD3P0DP91 1061 aa26.32■■□□□ 1.8
CCDC43-204ENST00000588687 PDGFDQ9GZP0 370 aaPredicted RBP26.32■■□□□ 1.8
CCDC43-204ENST00000588687 NME9Q86XW9 330 aa26.31■■□□□ 1.8
CCDC43-204ENST00000588687 EDC4Q6P2E9 1401 aaKnown RBP26.31■■□□□ 1.8
CCDC43-204ENST00000588687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
CCDC43-204ENST00000588687 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
CCDC43-204ENST00000588687 CARD11Q9BXL7 1154 aa26.27■■□□□ 1.8
CCDC43-204ENST00000588687 BTAF1O14981 1849 aa26.27■■□□□ 1.8
CCDC43-204ENST00000588687 EXOC5O00471 708 aa26.26■■□□□ 1.79
CCDC43-204ENST00000588687 TXNRD1Q16881 649 aa26.26■■□□□ 1.79
CCDC43-204ENST00000588687 FAM208AQ9UK61 1670 aaKnown RBP26.25■■□□□ 1.79
CCDC43-204ENST00000588687 PPP1R1BQ9UD71 204 aaPredicted RBP26.25■■□□□ 1.79
CCDC43-204ENST00000588687 SLC12A5Q9H2X9 1139 aa26.24■■□□□ 1.79
CCDC43-204ENST00000588687 PTGER2P43116 358 aa26.23■■□□□ 1.79
CCDC43-204ENST00000588687 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 IL2RBP14784 551 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 SLC15A2Q16348 729 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 HDGFL2Q7Z4V5 671 aaPredicted RBP26.19■■□□□ 1.78
CCDC43-204ENST00000588687 TMC1Q8TDI8 760 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 ANKRD24Q8TF21 1146 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 PUS7Q96PZ0 661 aaKnown RBP26.19■■□□□ 1.78
CCDC43-204ENST00000588687 NLRP2Q9NX02 1062 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 SHANK3Q9BYB0 1731 aa26.19■■□□□ 1.78
CCDC43-204ENST00000588687 YY1P25490 414 aa26.18■■□□□ 1.78
CCDC43-204ENST00000588687 TESK2Q96S53 571 aa26.18■■□□□ 1.78
CCDC43-204ENST00000588687 STK32BQ9NY57 414 aa26.17■■□□□ 1.78
CCDC43-204ENST00000588687 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
CCDC43-204ENST00000588687 ACSBG1Q96GR2 724 aa26.16■■□□□ 1.78
CCDC43-204ENST00000588687 SGIP1Q9BQI5 828 aa26.16■■□□□ 1.78
CCDC43-204ENST00000588687 TERF2IPQ9NYB0 399 aa26.15■■□□□ 1.78
CCDC43-204ENST00000588687 QSER1Q2KHR3 1735 aa26.14■■□□□ 1.78
CCDC43-204ENST00000588687 GOLGB1Q14789 3259 aaKnown RBP26.13■■□□□ 1.77
CCDC43-204ENST00000588687 RGPD2P0DJD1 1756 aa26.13■■□□□ 1.77
CCDC43-204ENST00000588687 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
CCDC43-204ENST00000588687 IP6K1Q92551 441 aa26.12■■□□□ 1.77
CCDC43-204ENST00000588687 ATF5Q9Y2D1 282 aaPredicted RBP26.12■■□□□ 1.77
CCDC43-204ENST00000588687 COL24A1Q17RW2 1714 aa26.11■■□□□ 1.77
CCDC43-204ENST00000588687 MTFR1LQ9H019 292 aa26.11■■□□□ 1.77
CCDC43-204ENST00000588687 TUBGCP6Q96RT7 1819 aa26.1■■□□□ 1.77
CCDC43-204ENST00000588687 ZNF827Q17R98 1081 aa26.09■■□□□ 1.77
CCDC43-204ENST00000588687 LRRC4BQ9NT99 713 aa26.09■■□□□ 1.77
CCDC43-204ENST00000588687 MAP3K19Q56UN5 1328 aa26.08■■□□□ 1.77
CCDC43-204ENST00000588687 LY75O60449 1722 aa26.08■■□□□ 1.76
CCDC43-204ENST00000588687 MEGF6O75095 1541 aa26.07■■□□□ 1.76
CCDC43-204ENST00000588687 ST20-MTHFSA0A0A6YYL1 179 aa26.06■■□□□ 1.76
CCDC43-204ENST00000588687 FHDC1Q9C0D6 1143 aaPredicted RBP26.06■■□□□ 1.76
CCDC43-204ENST00000588687 NSD2O96028 1365 aa26.06■■□□□ 1.76
CCDC43-204ENST00000588687 KAT6BQ8WYB5 2073 aa26.05■■□□□ 1.76
CCDC43-204ENST00000588687 ANKRD36BQ8N2N9 1353 aa26.05■■□□□ 1.76
CCDC43-204ENST00000588687 MAP3K5Q99683 1374 aa26.05■■□□□ 1.76
CCDC43-204ENST00000588687 HOXC9P31274 260 aa26.04■■□□□ 1.76
CCDC43-204ENST00000588687 SYT17Q9BSW7 474 aa26.04■■□□□ 1.76
CCDC43-204ENST00000588687 RTL1A6NKG5 1358 aa26.03■■□□□ 1.76
CCDC43-204ENST00000588687 FBLN1P23142 703 aa26.02■■□□□ 1.76
CCDC43-204ENST00000588687 AKT1S1Q96B36 256 aa26.02■■□□□ 1.76
CCDC43-204ENST00000588687 DCAF8L1A6NGE4 600 aa26.01■■□□□ 1.75
CCDC43-204ENST00000588687 LTV1Q96GA3 475 aaPredicted RBP26.01■■□□□ 1.75
CCDC43-204ENST00000588687 COG3Q96JB2 828 aa26■■□□□ 1.75
CCDC43-204ENST00000588687 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
CCDC43-204ENST00000588687 CHD4Q14839 1912 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms