RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ARHGEF25Q86VW2 580 aa20.14■□□□□ 0.81
DNMT1-213ENST00000587604 PLSCR1O15162 318 aa20.13■□□□□ 0.81
DNMT1-213ENST00000587604 CDCA7Q9BWT1 371 aaPredicted RBP20.13■□□□□ 0.81
DNMT1-213ENST00000587604 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
DNMT1-213ENST00000587604 TTC21AQ8NDW8 1320 aa20.12■□□□□ 0.81
DNMT1-213ENST00000587604 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
DNMT1-213ENST00000587604 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
DNMT1-213ENST00000587604 CPSF1Q10570 1443 aaKnown RBP20.11■□□□□ 0.81
DNMT1-213ENST00000587604 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
DNMT1-213ENST00000587604 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
DNMT1-213ENST00000587604 BCL11BQ9C0K0 894 aaPredicted RBP20.1■□□□□ 0.81
DNMT1-213ENST00000587604 RGPD3A6NKT7 1758 aaPredicted RBP20.1■□□□□ 0.81
DNMT1-213ENST00000587604 RGPD4Q7Z3J3 1758 aa20.1■□□□□ 0.81
DNMT1-213ENST00000587604 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
DNMT1-213ENST00000587604 SPON1Q9HCB6 807 aa20.09■□□□□ 0.81
DNMT1-213ENST00000587604 WNK3Q9BYP7 1800 aa20.09■□□□□ 0.81
DNMT1-213ENST00000587604 SOX12O15370 315 aa20.08■□□□□ 0.81
DNMT1-213ENST00000587604 CSB-PGBD3P0DP91 1061 aa20.08■□□□□ 0.81
DNMT1-213ENST00000587604 BCL9O00512 1426 aa20.08■□□□□ 0.8
DNMT1-213ENST00000587604 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
DNMT1-213ENST00000587604 KCNQ2O43526 872 aa20.07■□□□□ 0.8
DNMT1-213ENST00000587604 PTF1AQ7RTS3 328 aa20.06■□□□□ 0.8
DNMT1-213ENST00000587604 EXOC5O00471 708 aa20.05■□□□□ 0.8
DNMT1-213ENST00000587604 NFAT5O94916 1531 aa20.05■□□□□ 0.8
DNMT1-213ENST00000587604 PPP1R1BQ9UD71 204 aaPredicted RBP20.04■□□□□ 0.8
DNMT1-213ENST00000587604 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
DNMT1-213ENST00000587604 PROM2Q8N271 834 aa20.03■□□□□ 0.8
DNMT1-213ENST00000587604 CCDC7Q96M83 1385 aa20.03■□□□□ 0.8
DNMT1-213ENST00000587604 ABCC6O95255 1503 aa20.02■□□□□ 0.8
DNMT1-213ENST00000587604 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.8
DNMT1-213ENST00000587604 USP31Q70CQ4 1352 aa20.01■□□□□ 0.79
DNMT1-213ENST00000587604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.01■□□□□ 0.79
DNMT1-213ENST00000587604 ANO8Q9HCE9 1232 aaPredicted RBP20.01■□□□□ 0.79
DNMT1-213ENST00000587604 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
DNMT1-213ENST00000587604 NINLQ9Y2I6 1382 aa19.98■□□□□ 0.79
DNMT1-213ENST00000587604 TXNRD1Q16881 649 aa19.98■□□□□ 0.79
DNMT1-213ENST00000587604 TMC1Q8TDI8 760 aa19.98■□□□□ 0.79
DNMT1-213ENST00000587604 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
DNMT1-213ENST00000587604 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
DNMT1-213ENST00000587604 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
DNMT1-213ENST00000587604 NME9Q86XW9 330 aa19.97■□□□□ 0.79
DNMT1-213ENST00000587604 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
DNMT1-213ENST00000587604 CASZ1Q86V15 1759 aa19.97■□□□□ 0.79
DNMT1-213ENST00000587604 ERBB3P21860 1342 aa19.97■□□□□ 0.79
DNMT1-213ENST00000587604 TNS2Q63HR2 1409 aa19.96■□□□□ 0.79
DNMT1-213ENST00000587604 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
DNMT1-213ENST00000587604 PDGFDQ9GZP0 370 aaPredicted RBP19.96■□□□□ 0.79
DNMT1-213ENST00000587604 SLC12A5Q9H2X9 1139 aa19.96■□□□□ 0.79
DNMT1-213ENST00000587604 NLRP2Q9NX02 1062 aa19.96■□□□□ 0.79
DNMT1-213ENST00000587604 YY1P25490 414 aa19.95■□□□□ 0.78
DNMT1-213ENST00000587604 STK32BQ9NY57 414 aa19.95■□□□□ 0.78
DNMT1-213ENST00000587604 LTN1O94822 1766 aa19.95■□□□□ 0.78
DNMT1-213ENST00000587604 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
DNMT1-213ENST00000587604 IL2RBP14784 551 aa19.93■□□□□ 0.78
DNMT1-213ENST00000587604 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
DNMT1-213ENST00000587604 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
DNMT1-213ENST00000587604 ZBTB7AO95365 584 aa19.92■□□□□ 0.78
DNMT1-213ENST00000587604 ANKRD24Q8TF21 1146 aa19.92■□□□□ 0.78
DNMT1-213ENST00000587604 EDC4Q6P2E9 1401 aaKnown RBP19.92■□□□□ 0.78
DNMT1-213ENST00000587604 NHSQ6T4R5 1651 aa19.91■□□□□ 0.78
DNMT1-213ENST00000587604 PTGER2P43116 358 aa19.9■□□□□ 0.78
DNMT1-213ENST00000587604 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
DNMT1-213ENST00000587604 A0A1W2PP64 1363 aa19.89■□□□□ 0.77
DNMT1-213ENST00000587604 ATF5Q9Y2D1 282 aaPredicted RBP19.89■□□□□ 0.77
DNMT1-213ENST00000587604 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
DNMT1-213ENST00000587604 IP6K1Q92551 441 aa19.87■□□□□ 0.77
DNMT1-213ENST00000587604 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
DNMT1-213ENST00000587604 MYOM1P52179 1685 aa19.85■□□□□ 0.77
DNMT1-213ENST00000587604 BTAF1O14981 1849 aa19.85■□□□□ 0.77
DNMT1-213ENST00000587604 UTRNP46939 3433 aa19.85■□□□□ 0.77
DNMT1-213ENST00000587604 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
DNMT1-213ENST00000587604 TESK2Q96S53 571 aa19.84■□□□□ 0.77
DNMT1-213ENST00000587604 SGIP1Q9BQI5 828 aa19.83■□□□□ 0.77
DNMT1-213ENST00000587604 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
DNMT1-213ENST00000587604 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
DNMT1-213ENST00000587604 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
DNMT1-213ENST00000587604 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
DNMT1-213ENST00000587604 PAPPAQ13219 1627 aa19.81■□□□□ 0.76
DNMT1-213ENST00000587604 DDX54Q8TDD1 881 aaKnown RBP19.81■□□□□ 0.76
DNMT1-213ENST00000587604 COG3Q96JB2 828 aa19.81■□□□□ 0.76
DNMT1-213ENST00000587604 FHDC1Q9C0D6 1143 aaPredicted RBP19.81■□□□□ 0.76
DNMT1-213ENST00000587604 LRRC4BQ9NT99 713 aa19.8■□□□□ 0.76
DNMT1-213ENST00000587604 MAP3K19Q56UN5 1328 aa19.78■□□□□ 0.76
DNMT1-213ENST00000587604 HOXC9P31274 260 aa19.78■□□□□ 0.76
DNMT1-213ENST00000587604 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
DNMT1-213ENST00000587604 SLC27A3Q5K4L6 730 aa19.78■□□□□ 0.76
DNMT1-213ENST00000587604 ARXQ96QS3 562 aa19.78■□□□□ 0.76
DNMT1-213ENST00000587604 AMPHP49418 695 aa19.77■□□□□ 0.76
DNMT1-213ENST00000587604 FBLN1P23142 703 aa19.76■□□□□ 0.75
DNMT1-213ENST00000587604 AKT1S1Q96B36 256 aa19.76■□□□□ 0.75
DNMT1-213ENST00000587604 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
DNMT1-213ENST00000587604 ANKRD36BQ8N2N9 1353 aa19.74■□□□□ 0.75
DNMT1-213ENST00000587604 ZCRB1Q8TBF4 217 aaKnown RBP19.74■□□□□ 0.75
DNMT1-213ENST00000587604 SLC16A10Q8TF71 515 aa19.74■□□□□ 0.75
DNMT1-213ENST00000587604 RGPD2P0DJD1 1756 aa19.74■□□□□ 0.75
DNMT1-213ENST00000587604 MAP3K5Q99683 1374 aa19.73■□□□□ 0.75
DNMT1-213ENST00000587604 CHD4Q14839 1912 aa19.73■□□□□ 0.75
DNMT1-213ENST00000587604 SYTL4Q96C24 671 aaPredicted RBP19.73■□□□□ 0.75
DNMT1-213ENST00000587604 QSER1Q2KHR3 1735 aa19.72■□□□□ 0.75
DNMT1-213ENST00000587604 FYB1O15117 783 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms