RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
DNMT1-212ENST00000587197 LMO7Q8WWI1 1683 aa23.77■■□□□ 1.4
DNMT1-212ENST00000587197 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
DNMT1-212ENST00000587197 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
DNMT1-212ENST00000587197 BARGINQ6ZT62 677 aa23.76■■□□□ 1.39
DNMT1-212ENST00000587197 THRAP3Q9Y2W1 955 aaKnown RBP23.76■■□□□ 1.39
DNMT1-212ENST00000587197 FYB1O15117 783 aa23.75■■□□□ 1.39
DNMT1-212ENST00000587197 TCP11L2Q8N4U5 519 aa23.75■■□□□ 1.39
DNMT1-212ENST00000587197 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
DNMT1-212ENST00000587197 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
DNMT1-212ENST00000587197 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
DNMT1-212ENST00000587197 COL5A2P05997 1499 aaPredicted RBP23.74■■□□□ 1.39
DNMT1-212ENST00000587197 THSD7AQ9UPZ6 1657 aa23.73■■□□□ 1.39
DNMT1-212ENST00000587197 SOX12O15370 315 aa23.73■■□□□ 1.39
DNMT1-212ENST00000587197 ARHGEF25Q86VW2 580 aa23.73■■□□□ 1.39
DNMT1-212ENST00000587197 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
DNMT1-212ENST00000587197 USP54Q70EL1 1684 aa23.73■■□□□ 1.39
DNMT1-212ENST00000587197 COG3Q96JB2 828 aa23.72■■□□□ 1.39
DNMT1-212ENST00000587197 CRB1P82279 1406 aa23.71■■□□□ 1.39
DNMT1-212ENST00000587197 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
DNMT1-212ENST00000587197 PER1O15534 1290 aaPredicted RBP23.69■■□□□ 1.38
DNMT1-212ENST00000587197 TOM1L2Q6ZVM7 507 aa23.69■■□□□ 1.38
DNMT1-212ENST00000587197 KNSTRNQ9Y448 316 aa23.69■■□□□ 1.38
DNMT1-212ENST00000587197 BAG6P46379 1132 aa23.68■■□□□ 1.38
DNMT1-212ENST00000587197 GGNBP2Q9H3C7 697 aa23.68■■□□□ 1.38
DNMT1-212ENST00000587197 NSD2O96028 1365 aa23.67■■□□□ 1.38
DNMT1-212ENST00000587197 FAM196AQ6ZSG2 479 aa23.67■■□□□ 1.38
DNMT1-212ENST00000587197 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
DNMT1-212ENST00000587197 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
DNMT1-212ENST00000587197 AXIN2Q9Y2T1 843 aa23.66■■□□□ 1.38
DNMT1-212ENST00000587197 NFAT5O94916 1531 aa23.65■■□□□ 1.38
DNMT1-212ENST00000587197 FAM182BQ5T319 152 aa23.65■■□□□ 1.38
DNMT1-212ENST00000587197 COL18A1P39060 1754 aa23.65■■□□□ 1.38
DNMT1-212ENST00000587197 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
DNMT1-212ENST00000587197 ABCC6O95255 1503 aa23.64■■□□□ 1.37
DNMT1-212ENST00000587197 AMER1Q5JTC6 1135 aaPredicted RBP23.63■■□□□ 1.37
DNMT1-212ENST00000587197 CDCA7Q9BWT1 371 aaPredicted RBP23.62■■□□□ 1.37
DNMT1-212ENST00000587197 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
DNMT1-212ENST00000587197 EP400Q96L91 3159 aa23.62■■□□□ 1.37
DNMT1-212ENST00000587197 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
DNMT1-212ENST00000587197 CARD10Q9BWT7 1032 aa23.6■■□□□ 1.37
DNMT1-212ENST00000587197 KIF20BQ96Q89 1820 aa23.6■■□□□ 1.37
DNMT1-212ENST00000587197 DDB1Q16531 1140 aa23.58■■□□□ 1.37
DNMT1-212ENST00000587197 PARP4Q9UKK3 1724 aaKnown RBP23.58■■□□□ 1.37
DNMT1-212ENST00000587197 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
DNMT1-212ENST00000587197 TRIM37O94972 964 aa23.57■■□□□ 1.36
DNMT1-212ENST00000587197 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
DNMT1-212ENST00000587197 KIF24Q5T7B8 1368 aa23.54■■□□□ 1.36
DNMT1-212ENST00000587197 ERBB3P21860 1342 aa23.54■■□□□ 1.36
DNMT1-212ENST00000587197 MAP3K19Q56UN5 1328 aa23.54■■□□□ 1.36
DNMT1-212ENST00000587197 LTN1O94822 1766 aa23.53■■□□□ 1.36
DNMT1-212ENST00000587197 DISP2A7MBM2 1401 aa23.53■■□□□ 1.36
DNMT1-212ENST00000587197 EN1Q05925 392 aaPredicted RBP23.53■■□□□ 1.36
DNMT1-212ENST00000587197 MORC1Q86VD1 984 aa23.53■■□□□ 1.36
DNMT1-212ENST00000587197 IP6K1Q92551 441 aa23.53■■□□□ 1.36
DNMT1-212ENST00000587197 APBA3O96018 575 aa23.52■■□□□ 1.36
DNMT1-212ENST00000587197 FBLN1P23142 703 aa23.52■■□□□ 1.36
DNMT1-212ENST00000587197 NLRP2Q9NX02 1062 aa23.52■■□□□ 1.36
DNMT1-212ENST00000587197 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
DNMT1-212ENST00000587197 OVOS2A0A0G2JMS6 1433 aa23.51■■□□□ 1.35
DNMT1-212ENST00000587197 EXOC5O00471 708 aa23.51■■□□□ 1.35
DNMT1-212ENST00000587197 DDX10Q13206 875 aaKnown RBP23.51■■□□□ 1.35
DNMT1-212ENST00000587197 ANKRD24Q8TF21 1146 aa23.51■■□□□ 1.35
DNMT1-212ENST00000587197 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
DNMT1-212ENST00000587197 AMPHP49418 695 aa23.5■■□□□ 1.35
DNMT1-212ENST00000587197 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
DNMT1-212ENST00000587197 TNS1Q9HBL0 1735 aaKnown RBP23.49■■□□□ 1.35
DNMT1-212ENST00000587197 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
DNMT1-212ENST00000587197 WNK3Q9BYP7 1800 aa23.48■■□□□ 1.35
DNMT1-212ENST00000587197 HOXC9P31274 260 aa23.48■■□□□ 1.35
DNMT1-212ENST00000587197 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
DNMT1-212ENST00000587197 POLKQ9UBT6 870 aa23.48■■□□□ 1.35
DNMT1-212ENST00000587197 PARD3Q8TEW0 1356 aa23.48■■□□□ 1.35
DNMT1-212ENST00000587197 FLT4P35916 1363 aa23.46■■□□□ 1.35
DNMT1-212ENST00000587197 EZH2Q15910 746 aaKnown RBP23.46■■□□□ 1.35
DNMT1-212ENST00000587197 IL2RBP14784 551 aa23.45■■□□□ 1.34
DNMT1-212ENST00000587197 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
DNMT1-212ENST00000587197 CAMKK2Q96RR4 588 aa23.45■■□□□ 1.34
DNMT1-212ENST00000587197 EMILIN1Q9Y6C2 1016 aa23.45■■□□□ 1.34
DNMT1-212ENST00000587197 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
DNMT1-212ENST00000587197 INSRP06213 1382 aa23.43■■□□□ 1.34
DNMT1-212ENST00000587197 MARCH10Q8NA82 808 aaPredicted RBP23.43■■□□□ 1.34
DNMT1-212ENST00000587197 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
DNMT1-212ENST00000587197 BCL9O00512 1426 aa23.42■■□□□ 1.34
DNMT1-212ENST00000587197 HSP90AB2PQ58FF8 381 aa23.41■■□□□ 1.34
DNMT1-212ENST00000587197 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
DNMT1-212ENST00000587197 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
DNMT1-212ENST00000587197 TNS2Q63HR2 1409 aa23.41■■□□□ 1.34
DNMT1-212ENST00000587197 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
DNMT1-212ENST00000587197 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
DNMT1-212ENST00000587197 NBPF14Q5TI25 921 aa23.38■■□□□ 1.33
DNMT1-212ENST00000587197 PSDA5PKW4 1024 aaPredicted RBP23.37■■□□□ 1.33
DNMT1-212ENST00000587197 PLSCR1O15162 318 aa23.37■■□□□ 1.33
DNMT1-212ENST00000587197 MAP2P11137 1827 aaKnown RBP23.37■■□□□ 1.33
DNMT1-212ENST00000587197 SBF2Q86WG5 1849 aa23.36■■□□□ 1.33
DNMT1-212ENST00000587197 MTHFSP49914 203 aa23.35■■□□□ 1.33
DNMT1-212ENST00000587197 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
DNMT1-212ENST00000587197 R3HDM1Q15032 1099 aaKnown RBP23.34■■□□□ 1.33
DNMT1-212ENST00000587197 RALBP1Q15311 655 aa23.34■■□□□ 1.33
DNMT1-212ENST00000587197 RREB1Q92766 1687 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms