RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 RGPD3A6NKT7 1758 aaPredicted RBP19.96■□□□□ 0.79
HDAC5-203ENST00000586339 RGPD4Q7Z3J3 1758 aa19.96■□□□□ 0.79
HDAC5-203ENST00000586339 ARHGEF25Q86VW2 580 aa19.96■□□□□ 0.79
HDAC5-203ENST00000586339 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
HDAC5-203ENST00000586339 WDR17Q8IZU2 1322 aa19.96■□□□□ 0.79
HDAC5-203ENST00000586339 USP31Q70CQ4 1352 aa19.95■□□□□ 0.79
HDAC5-203ENST00000586339 LTN1O94822 1766 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 OVOS2A0A0G2JMS6 1433 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 OVOS2A0A0J9YW53 1432 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 OVOS2Q6IE36 1432 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 ZBTB7CA1YPR0 619 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 PUS7Q96PZ0 661 aaKnown RBP19.95■□□□□ 0.78
HDAC5-203ENST00000586339 NUP188Q5SRE5 1749 aa19.95■□□□□ 0.78
HDAC5-203ENST00000586339 CAMKK2Q96RR4 588 aa19.94■□□□□ 0.78
HDAC5-203ENST00000586339 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
HDAC5-203ENST00000586339 TOM1L2Q6ZVM7 507 aa19.93■□□□□ 0.78
HDAC5-203ENST00000586339 APBA3O96018 575 aa19.92■□□□□ 0.78
HDAC5-203ENST00000586339 CDCA7Q9BWT1 371 aaPredicted RBP19.92■□□□□ 0.78
HDAC5-203ENST00000586339 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
HDAC5-203ENST00000586339 EDC4Q6P2E9 1401 aaKnown RBP19.92■□□□□ 0.78
HDAC5-203ENST00000586339 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
HDAC5-203ENST00000586339 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
HDAC5-203ENST00000586339 NINLQ9Y2I6 1382 aa19.91■□□□□ 0.78
HDAC5-203ENST00000586339 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
HDAC5-203ENST00000586339 HDGFL2Q7Z4V5 671 aaPredicted RBP19.9■□□□□ 0.78
HDAC5-203ENST00000586339 BCL9O00512 1426 aa19.89■□□□□ 0.77
HDAC5-203ENST00000586339 DDB1Q16531 1140 aa19.89■□□□□ 0.77
HDAC5-203ENST00000586339 CARD10Q9BWT7 1032 aa19.89■□□□□ 0.77
HDAC5-203ENST00000586339 CCDC7Q96M83 1385 aa19.88■□□□□ 0.77
HDAC5-203ENST00000586339 SOX12O15370 315 aa19.88■□□□□ 0.77
HDAC5-203ENST00000586339 TMC1Q8TDI8 760 aa19.88■□□□□ 0.77
HDAC5-203ENST00000586339 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
HDAC5-203ENST00000586339 A0A1W2PP64 1363 aa19.87■□□□□ 0.77
HDAC5-203ENST00000586339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.87■□□□□ 0.77
HDAC5-203ENST00000586339 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
HDAC5-203ENST00000586339 R3HDM1Q15032 1099 aaKnown RBP19.86■□□□□ 0.77
HDAC5-203ENST00000586339 SLC12A5Q9H2X9 1139 aa19.86■□□□□ 0.77
HDAC5-203ENST00000586339 FAM208AQ9UK61 1670 aaKnown RBP19.85■□□□□ 0.77
HDAC5-203ENST00000586339 NME9Q86XW9 330 aa19.85■□□□□ 0.77
HDAC5-203ENST00000586339 TESK2Q96S53 571 aa19.85■□□□□ 0.77
HDAC5-203ENST00000586339 TNS2Q63HR2 1409 aa19.84■□□□□ 0.77
HDAC5-203ENST00000586339 ERBB3P21860 1342 aa19.83■□□□□ 0.77
HDAC5-203ENST00000586339 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
HDAC5-203ENST00000586339 PLSCR1O15162 318 aa19.81■□□□□ 0.76
HDAC5-203ENST00000586339 NBPF14Q5TI25 921 aa19.81■□□□□ 0.76
HDAC5-203ENST00000586339 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
HDAC5-203ENST00000586339 MARCH10Q8NA82 808 aaPredicted RBP19.8■□□□□ 0.76
HDAC5-203ENST00000586339 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
HDAC5-203ENST00000586339 NHSQ6T4R5 1651 aa19.79■□□□□ 0.76
HDAC5-203ENST00000586339 EXOC5O00471 708 aa19.78■□□□□ 0.76
HDAC5-203ENST00000586339 ANKRD36BQ8N2N9 1353 aa19.78■□□□□ 0.76
HDAC5-203ENST00000586339 USP47Q96K76 1375 aa19.78■□□□□ 0.76
HDAC5-203ENST00000586339 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
HDAC5-203ENST00000586339 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
HDAC5-203ENST00000586339 TMF1P82094 1093 aa19.74■□□□□ 0.75
HDAC5-203ENST00000586339 ANKRD24Q8TF21 1146 aa19.74■□□□□ 0.75
HDAC5-203ENST00000586339 IL2RBP14784 551 aa19.73■□□□□ 0.75
HDAC5-203ENST00000586339 IP6K1Q92551 441 aa19.73■□□□□ 0.75
HDAC5-203ENST00000586339 COG3Q96JB2 828 aa19.73■□□□□ 0.75
HDAC5-203ENST00000586339 CASZ1Q86V15 1759 aa19.72■□□□□ 0.75
HDAC5-203ENST00000586339 TIMELESSQ9UNS1 1208 aa19.72■□□□□ 0.75
HDAC5-203ENST00000586339 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
HDAC5-203ENST00000586339 BTAF1O14981 1849 aa19.72■□□□□ 0.75
HDAC5-203ENST00000586339 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
HDAC5-203ENST00000586339 PTF1AQ7RTS3 328 aa19.71■□□□□ 0.75
HDAC5-203ENST00000586339 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
HDAC5-203ENST00000586339 RGPD2P0DJD1 1756 aa19.7■□□□□ 0.74
HDAC5-203ENST00000586339 MYOM1P52179 1685 aa19.7■□□□□ 0.74
HDAC5-203ENST00000586339 MAP3K19Q56UN5 1328 aa19.68■□□□□ 0.74
HDAC5-203ENST00000586339 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
HDAC5-203ENST00000586339 SHANK3Q9BYB0 1731 aa19.66■□□□□ 0.74
HDAC5-203ENST00000586339 HOXC9P31274 260 aa19.66■□□□□ 0.74
HDAC5-203ENST00000586339 PROM2Q8N271 834 aa19.66■□□□□ 0.74
HDAC5-203ENST00000586339 SPON1Q9HCB6 807 aa19.66■□□□□ 0.74
HDAC5-203ENST00000586339 KCNQ2O43526 872 aa19.65■□□□□ 0.74
HDAC5-203ENST00000586339 AMPHP49418 695 aa19.65■□□□□ 0.74
HDAC5-203ENST00000586339 TXNRD1Q16881 649 aa19.65■□□□□ 0.74
HDAC5-203ENST00000586339 PAPPAQ13219 1627 aa19.65■□□□□ 0.74
HDAC5-203ENST00000586339 FYB1O15117 783 aa19.63■□□□□ 0.73
HDAC5-203ENST00000586339 DOT1LQ8TEK3 1739 aa19.62■□□□□ 0.73
HDAC5-203ENST00000586339 KIF24Q5T7B8 1368 aa19.62■□□□□ 0.73
HDAC5-203ENST00000586339 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
HDAC5-203ENST00000586339 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
HDAC5-203ENST00000586339 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
HDAC5-203ENST00000586339 ACSBG1Q96GR2 724 aa19.61■□□□□ 0.73
HDAC5-203ENST00000586339 GGNBP2Q9H3C7 697 aa19.61■□□□□ 0.73
HDAC5-203ENST00000586339 QSER1Q2KHR3 1735 aa19.6■□□□□ 0.73
HDAC5-203ENST00000586339 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
HDAC5-203ENST00000586339 ANKRD26Q9UPS8 1709 aa19.59■□□□□ 0.73
HDAC5-203ENST00000586339 MEGF6O75095 1541 aa19.59■□□□□ 0.73
HDAC5-203ENST00000586339 FBLN1P23142 703 aa19.58■□□□□ 0.72
HDAC5-203ENST00000586339 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.72
HDAC5-203ENST00000586339 SLC15A2Q16348 729 aa19.58■□□□□ 0.72
HDAC5-203ENST00000586339 NSD3Q9BZ95 1437 aa19.58■□□□□ 0.72
HDAC5-203ENST00000586339 FLT4P35916 1363 aa19.57■□□□□ 0.72
HDAC5-203ENST00000586339 CGNL1Q0VF96 1302 aa19.57■□□□□ 0.72
HDAC5-203ENST00000586339 LY75O60449 1722 aa19.57■□□□□ 0.72
HDAC5-203ENST00000586339 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
HDAC5-203ENST00000586339 INSRP06213 1382 aa19.57■□□□□ 0.72
HDAC5-203ENST00000586339 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms