RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	PXYLP1	Q8TE99	480 aa		12.6	□□□□□ -0.39
NCOR1-223	ENST00000583226	FYCO1	Q9BQS8	1478 aa		12.59	□□□□□ -0.39
NCOR1-223	ENST00000583226	METTL3	Q86U44	580 aa	Known RBP	12.59	□□□□□ -0.39
NCOR1-223	ENST00000583226	TMEM134	Q9H6X4	195 aa		12.59	□□□□□ -0.39
NCOR1-223	ENST00000583226	SCAF11	Q99590	1463 aa	Known RBP	12.59	□□□□□ -0.39
NCOR1-223	ENST00000583226	ZNF644	Q9H582	1327 aa	Predicted RBP	12.58	□□□□□ -0.4
NCOR1-223	ENST00000583226	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.57	□□□□□ -0.4
NCOR1-223	ENST00000583226	NLRP7	Q8WX94	980 aa		12.57	□□□□□ -0.4
NCOR1-223	ENST00000583226	ROBO1	Q9Y6N7	1651 aa		12.57	□□□□□ -0.4
NCOR1-223	ENST00000583226	JCAD	Q9P266	1359 aa		12.56	□□□□□ -0.4
NCOR1-223	ENST00000583226	LRRC9	Q6ZRR7	1453 aa		12.55	□□□□□ -0.4
NCOR1-223	ENST00000583226	LTK	P29376	864 aa		12.55	□□□□□ -0.4
NCOR1-223	ENST00000583226	TMEM94	Q12767	1356 aa		12.55	□□□□□ -0.4
NCOR1-223	ENST00000583226	ARHGAP23	Q9P227	1491 aa		12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	SLIT1	O75093	1534 aa		12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	APLP1	P51693	650 aa		12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	ZNF772	Q68DY9	489 aa	Predicted RBP	12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	TXNDC2	Q86VQ3	553 aa		12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	NECTIN2	Q92692	538 aa		12.54	□□□□□ -0.4
NCOR1-223	ENST00000583226	ERVK-7	P63135	1459 aa		12.53	□□□□□ -0.4
NCOR1-223	ENST00000583226	UBR1	Q8IWV7	1749 aa		12.53	□□□□□ -0.4
NCOR1-223	ENST00000583226	NCOA2	Q15596	1464 aa		12.53	□□□□□ -0.4
NCOR1-223	ENST00000583226	MAP2K5	Q13163	448 aa		12.52	□□□□□ -0.41
NCOR1-223	ENST00000583226	RSPH4A	Q5TD94	716 aa		12.52	□□□□□ -0.41
NCOR1-223	ENST00000583226	ABCC3	O15438	1527 aa		12.52	□□□□□ -0.41
NCOR1-223	ENST00000583226	KCNA6	P17658	529 aa		12.51	□□□□□ -0.41
NCOR1-223	ENST00000583226	TRIM52	Q96A61	297 aa		12.51	□□□□□ -0.41
NCOR1-223	ENST00000583226	EID1	Q9Y6B2	187 aa		12.51	□□□□□ -0.41
NCOR1-223	ENST00000583226	CCDC141	Q6ZP82	1450 aa		12.51	□□□□□ -0.41
NCOR1-223	ENST00000583226	MAP3K1	Q13233	1512 aa		12.51	□□□□□ -0.41
NCOR1-223	ENST00000583226	PHOX2B	Q99453	314 aa		12.5	□□□□□ -0.41
NCOR1-223	ENST00000583226	SPATA31A6	Q5VVP1	1343 aa		12.5	□□□□□ -0.41
NCOR1-223	ENST00000583226	MTUS2	Q5JR59	1369 aa		12.5	□□□□□ -0.41
NCOR1-223	ENST00000583226	TIAM1	Q13009	1591 aa		12.5	□□□□□ -0.41
NCOR1-223	ENST00000583226	PHLPP1	O60346	1717 aa		12.49	□□□□□ -0.41
NCOR1-223	ENST00000583226	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.49	□□□□□ -0.41
NCOR1-223	ENST00000583226	KCNC4	Q03721	635 aa		12.49	□□□□□ -0.41
NCOR1-223	ENST00000583226	KRI1	Q8N9T8	703 aa	Known RBP	12.49	□□□□□ -0.41
NCOR1-223	ENST00000583226	SLAIN2	Q9P270	581 aa		12.49	□□□□□ -0.41
NCOR1-223	ENST00000583226	IRF6	O14896	467 aa		12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	ITGBL1	O95965	494 aa	Predicted RBP	12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	RXRB	P28702	533 aa		12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	PROSER2	Q86WR7	435 aa	Predicted RBP	12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	MTR	Q99707	1265 aa		12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	LRP6	O75581	1613 aa		12.48	□□□□□ -0.41
NCOR1-223	ENST00000583226	PRDM15	P57071	1507 aa	Predicted RBP	12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	FGD6	Q6ZV73	1430 aa		12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	CFH	P08603	1231 aa		12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	COPS2	P61201	443 aa		12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	RDH13	Q8NBN7	331 aa		12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	CCDC102A	Q96A19	550 aa		12.47	□□□□□ -0.41
NCOR1-223	ENST00000583226	TMEM2	Q9UHN6	1383 aa		12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	DDX11L8	A8MPP1	907 aa		12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	MEX3C	Q5U5Q3	659 aa	Known RBP	12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	ZC3H15	Q8WU90	426 aa	Known RBP	12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	DAXX	Q9UER7	740 aa	Predicted RBP	12.46	□□□□□ -0.41
NCOR1-223	ENST00000583226	NKTR	P30414	1462 aa	Known RBP	12.46	□□□□□ -0.42
NCOR1-223	ENST00000583226	CAMSAP2	Q08AD1	1489 aa		12.46	□□□□□ -0.42
NCOR1-223	ENST00000583226	MSH6	P52701	1360 aa		12.45	□□□□□ -0.42
NCOR1-223	ENST00000583226	COL16A1	Q07092	1604 aa	Predicted RBP	12.45	□□□□□ -0.42
NCOR1-223	ENST00000583226	SLC10A3	P09131	477 aa		12.45	□□□□□ -0.42
NCOR1-223	ENST00000583226	KMT5B	Q4FZB7	885 aa		12.45	□□□□□ -0.42
NCOR1-223	ENST00000583226	PRR14	Q9BWN1	585 aa		12.45	□□□□□ -0.42
NCOR1-223	ENST00000583226	TJAP1	Q5JTD0	557 aa		12.44	□□□□□ -0.42
NCOR1-223	ENST00000583226	PCDHB3	Q9Y5E6	796 aa		12.44	□□□□□ -0.42
NCOR1-223	ENST00000583226	CEP162	Q5TB80	1403 aa		12.44	□□□□□ -0.42
NCOR1-223	ENST00000583226	CFAP65	Q6ZU64	1925 aa	Known RBP	12.43	□□□□□ -0.42
NCOR1-223	ENST00000583226	TSPY4	P0CV99	314 aa		12.43	□□□□□ -0.42
NCOR1-223	ENST00000583226	TSPY10	P0CW01	314 aa		12.43	□□□□□ -0.42
NCOR1-223	ENST00000583226	IL21	Q9HBE4	155 aa		12.43	□□□□□ -0.42
NCOR1-223	ENST00000583226	ARHGAP31	Q2M1Z3	1444 aa		12.43	□□□□□ -0.42
NCOR1-223	ENST00000583226	TET3	O43151	1660 aa		12.42	□□□□□ -0.42
NCOR1-223	ENST00000583226	IFFO2	Q5TF58	517 aa		12.42	□□□□□ -0.42
NCOR1-223	ENST00000583226	ARHGEF5	Q12774	1597 aa		12.42	□□□□□ -0.42
NCOR1-223	ENST00000583226	NWD1	Q149M9	1564 aa		12.42	□□□□□ -0.42
NCOR1-223	ENST00000583226	EHBP1L1	Q8N3D4	1523 aa		12.42	□□□□□ -0.42
NCOR1-223	ENST00000583226	MROH1	Q8NDA8	1641 aa		12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	MDM2	Q00987	491 aa	Predicted RBP	12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	ZNF516	Q92618	1163 aa		12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	BCAN	Q96GW7	911 aa		12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	SLC26A8	Q96RN1	970 aa		12.41	□□□□□ -0.42
NCOR1-223	ENST00000583226	KDM5A	P29375	1690 aa	Known RBP	12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226	SHPRH	Q149N8	1683 aa		12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226		A0A0G2JS52	829 aa		12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226	ZMYND10	O75800	440 aa		12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226	BLOC1S3	Q6QNY0	202 aa		12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226	BARGIN	Q6ZT62	677 aa		12.39	□□□□□ -0.43
NCOR1-223	ENST00000583226	PIK3C2B	O00750	1634 aa		12.38	□□□□□ -0.43
NCOR1-223	ENST00000583226	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.38	□□□□□ -0.43
NCOR1-223	ENST00000583226	CEP152	O94986	1710 aa		12.38	□□□□□ -0.43
NCOR1-223	ENST00000583226	SULF1	Q8IWU6	871 aa		12.38	□□□□□ -0.43
NCOR1-223	ENST00000583226	NCOA3	Q9Y6Q9	1424 aa		12.37	□□□□□ -0.43
NCOR1-223	ENST00000583226	EFCAB6	Q5THR3	1501 aa		12.37	□□□□□ -0.43
NCOR1-223	ENST00000583226	ACTN4	O43707	911 aa	Known RBP	12.37	□□□□□ -0.43
NCOR1-223	ENST00000583226	AFF2	P51816	1311 aa		12.37	□□□□□ -0.43
NCOR1-223	ENST00000583226	MAST1	Q9Y2H9	1570 aa		12.36	□□□□□ -0.43
NCOR1-223	ENST00000583226	RGS12	O14924	1447 aa		12.36	□□□□□ -0.43
NCOR1-223	ENST00000583226	RBM6	P78332	1123 aa	Known RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms