RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 PEAK1Q9H792 1746 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
ITGB4-208ENST00000582629 WDR17Q8IZU2 1322 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 ARHGEF25Q86VW2 580 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 RGPD5Q99666 1765 aa20.61■□□□□ 0.89
ITGB4-208ENST00000582629 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
ITGB4-208ENST00000582629 NFAT5O94916 1531 aa20.59■□□□□ 0.89
ITGB4-208ENST00000582629 DDB1Q16531 1140 aa20.59■□□□□ 0.89
ITGB4-208ENST00000582629 AXIN2Q9Y2T1 843 aa20.59■□□□□ 0.89
ITGB4-208ENST00000582629 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
ITGB4-208ENST00000582629 ABCC6O95255 1503 aa20.58■□□□□ 0.88
ITGB4-208ENST00000582629 USP54Q70EL1 1684 aa20.58■□□□□ 0.88
ITGB4-208ENST00000582629 SOX12O15370 315 aa20.57■□□□□ 0.88
ITGB4-208ENST00000582629 CDCA7Q9BWT1 371 aaPredicted RBP20.57■□□□□ 0.88
ITGB4-208ENST00000582629 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
ITGB4-208ENST00000582629 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
ITGB4-208ENST00000582629 NBPF14Q5TI25 921 aa20.56■□□□□ 0.88
ITGB4-208ENST00000582629 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
ITGB4-208ENST00000582629 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
ITGB4-208ENST00000582629 CARD10Q9BWT7 1032 aa20.54■□□□□ 0.88
ITGB4-208ENST00000582629 USP31Q70CQ4 1352 aa20.54■□□□□ 0.88
ITGB4-208ENST00000582629 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
ITGB4-208ENST00000582629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.52■□□□□ 0.88
ITGB4-208ENST00000582629 BCL9O00512 1426 aa20.52■□□□□ 0.87
ITGB4-208ENST00000582629 CCDC7Q96M83 1385 aa20.51■□□□□ 0.87
ITGB4-208ENST00000582629 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
ITGB4-208ENST00000582629 TMC1Q8TDI8 760 aa20.51■□□□□ 0.87
ITGB4-208ENST00000582629 LTN1O94822 1766 aa20.51■□□□□ 0.87
ITGB4-208ENST00000582629 PLSCR1O15162 318 aa20.5■□□□□ 0.87
ITGB4-208ENST00000582629 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
ITGB4-208ENST00000582629 NME9Q86XW9 330 aa20.49■□□□□ 0.87
ITGB4-208ENST00000582629 MARCH10Q8NA82 808 aaPredicted RBP20.49■□□□□ 0.87
ITGB4-208ENST00000582629 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
ITGB4-208ENST00000582629 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
ITGB4-208ENST00000582629 EXOC5O00471 708 aa20.47■□□□□ 0.87
ITGB4-208ENST00000582629 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
ITGB4-208ENST00000582629 TERF2IPQ9NYB0 399 aa20.47■□□□□ 0.87
ITGB4-208ENST00000582629 TNS2Q63HR2 1409 aa20.46■□□□□ 0.87
ITGB4-208ENST00000582629 ERBB3P21860 1342 aa20.46■□□□□ 0.87
ITGB4-208ENST00000582629 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
ITGB4-208ENST00000582629 PTF1AQ7RTS3 328 aa20.44■□□□□ 0.86
ITGB4-208ENST00000582629 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
ITGB4-208ENST00000582629 NLRP2Q9NX02 1062 aa20.42■□□□□ 0.86
ITGB4-208ENST00000582629 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
ITGB4-208ENST00000582629 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
ITGB4-208ENST00000582629 SPON1Q9HCB6 807 aa20.41■□□□□ 0.86
ITGB4-208ENST00000582629 KCNQ2O43526 872 aa20.4■□□□□ 0.86
ITGB4-208ENST00000582629 TESK2Q96S53 571 aa20.4■□□□□ 0.86
ITGB4-208ENST00000582629 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
ITGB4-208ENST00000582629 CASZ1Q86V15 1759 aa20.39■□□□□ 0.86
ITGB4-208ENST00000582629 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
ITGB4-208ENST00000582629 IL2RBP14784 551 aa20.39■□□□□ 0.85
ITGB4-208ENST00000582629 PROM2Q8N271 834 aa20.39■□□□□ 0.85
ITGB4-208ENST00000582629 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
ITGB4-208ENST00000582629 FAM208AQ9UK61 1670 aaKnown RBP20.38■□□□□ 0.85
ITGB4-208ENST00000582629 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
ITGB4-208ENST00000582629 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
ITGB4-208ENST00000582629 IP6K1Q92551 441 aa20.35■□□□□ 0.85
ITGB4-208ENST00000582629 COG3Q96JB2 828 aa20.34■□□□□ 0.85
ITGB4-208ENST00000582629 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
ITGB4-208ENST00000582629 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
ITGB4-208ENST00000582629 ACSBG1Q96GR2 724 aa20.33■□□□□ 0.85
ITGB4-208ENST00000582629 STK32BQ9NY57 414 aa20.33■□□□□ 0.85
ITGB4-208ENST00000582629 ANKRD36BQ8N2N9 1353 aa20.33■□□□□ 0.84
ITGB4-208ENST00000582629 BTAF1O14981 1849 aa20.32■□□□□ 0.84
ITGB4-208ENST00000582629 SLC15A2Q16348 729 aa20.3■□□□□ 0.84
ITGB4-208ENST00000582629 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
ITGB4-208ENST00000582629 USP47Q96K76 1375 aa20.3■□□□□ 0.84
ITGB4-208ENST00000582629 MAP3K19Q56UN5 1328 aa20.29■□□□□ 0.84
ITGB4-208ENST00000582629 TMF1P82094 1093 aa20.29■□□□□ 0.84
ITGB4-208ENST00000582629 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
ITGB4-208ENST00000582629 PAPPAQ13219 1627 aa20.28■□□□□ 0.84
ITGB4-208ENST00000582629 ZBTB7AO95365 584 aa20.28■□□□□ 0.84
ITGB4-208ENST00000582629 HOXC9P31274 260 aa20.28■□□□□ 0.84
ITGB4-208ENST00000582629 RGPD2P0DJD1 1756 aa20.27■□□□□ 0.84
ITGB4-208ENST00000582629 AMPHP49418 695 aa20.27■□□□□ 0.84
ITGB4-208ENST00000582629 MYOM1P52179 1685 aa20.26■□□□□ 0.83
ITGB4-208ENST00000582629 RTL1A6NKG5 1358 aa20.26■□□□□ 0.83
ITGB4-208ENST00000582629 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
ITGB4-208ENST00000582629 FBLN1P23142 703 aa20.24■□□□□ 0.83
ITGB4-208ENST00000582629 PTGER2P43116 358 aa20.24■□□□□ 0.83
ITGB4-208ENST00000582629 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
ITGB4-208ENST00000582629 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
ITGB4-208ENST00000582629 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
ITGB4-208ENST00000582629 SHANK3Q9BYB0 1731 aa20.23■□□□□ 0.83
ITGB4-208ENST00000582629 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
ITGB4-208ENST00000582629 ATF5Q9Y2D1 282 aaPredicted RBP20.23■□□□□ 0.83
ITGB4-208ENST00000582629 DOT1LQ8TEK3 1739 aa20.22■□□□□ 0.83
ITGB4-208ENST00000582629 FYB1O15117 783 aa20.22■□□□□ 0.83
ITGB4-208ENST00000582629 RRS1Q15050 365 aaKnown RBP20.21■□□□□ 0.83
ITGB4-208ENST00000582629 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
ITGB4-208ENST00000582629 SMG6Q86US8 1419 aaKnown RBP20.2■□□□□ 0.82
ITGB4-208ENST00000582629 YY1P25490 414 aa20.2■□□□□ 0.82
ITGB4-208ENST00000582629 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
ITGB4-208ENST00000582629 MEGF6O75095 1541 aa20.2■□□□□ 0.82
ITGB4-208ENST00000582629 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
ITGB4-208ENST00000582629 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
ITGB4-208ENST00000582629 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms