RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 LRP6O75581 1613 aa19.19■□□□□ 0.66
MKS1-211ENST00000581761 DUSP27Q5VZP5 1158 aa19.19■□□□□ 0.66
MKS1-211ENST00000581761 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
MKS1-211ENST00000581761 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
MKS1-211ENST00000581761 E9PSI1 815 aa19.18■□□□□ 0.66
MKS1-211ENST00000581761 RRP1P56182 461 aaKnown RBP19.18■□□□□ 0.66
MKS1-211ENST00000581761 PSME1Q06323 249 aa19.18■□□□□ 0.66
MKS1-211ENST00000581761 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
MKS1-211ENST00000581761 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
MKS1-211ENST00000581761 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
MKS1-211ENST00000581761 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
MKS1-211ENST00000581761 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
MKS1-211ENST00000581761 SPATA31A3Q5VYP0 1347 aa19.17■□□□□ 0.66
MKS1-211ENST00000581761 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
MKS1-211ENST00000581761 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
MKS1-211ENST00000581761 IL13P35225 146 aa19.15■□□□□ 0.66
MKS1-211ENST00000581761 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
MKS1-211ENST00000581761 PPP4R2Q9NY27 417 aa19.15■□□□□ 0.66
MKS1-211ENST00000581761 PIK3C2AO00443 1686 aa19.14■□□□□ 0.66
MKS1-211ENST00000581761 FCHSD2O94868 740 aa19.14■□□□□ 0.65
MKS1-211ENST00000581761 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
MKS1-211ENST00000581761 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
MKS1-211ENST00000581761 SBNO1A3KN83 1393 aa19.14■□□□□ 0.65
MKS1-211ENST00000581761 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
MKS1-211ENST00000581761 TRPM3Q9HCF6 1732 aaPredicted RBP19.12■□□□□ 0.65
MKS1-211ENST00000581761 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
MKS1-211ENST00000581761 SOX12O15370 315 aa19.12■□□□□ 0.65
MKS1-211ENST00000581761 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
MKS1-211ENST00000581761 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
MKS1-211ENST00000581761 NEFMP07197 916 aa19.11■□□□□ 0.65
MKS1-211ENST00000581761 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
MKS1-211ENST00000581761 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
MKS1-211ENST00000581761 NLRP6P59044 892 aa19.11■□□□□ 0.65
MKS1-211ENST00000581761 HMOX1P09601 288 aa19.1■□□□□ 0.65
MKS1-211ENST00000581761 USP54Q70EL1 1684 aa19.1■□□□□ 0.65
MKS1-211ENST00000581761 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
MKS1-211ENST00000581761 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
MKS1-211ENST00000581761 ZNF772Q68DY9 489 aaPredicted RBP19.09■□□□□ 0.65
MKS1-211ENST00000581761 ABTB2Q8N961 1025 aa19.09■□□□□ 0.65
MKS1-211ENST00000581761 EIF4A2Q14240 407 aaKnown RBP19.08■□□□□ 0.64
MKS1-211ENST00000581761 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
MKS1-211ENST00000581761 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
MKS1-211ENST00000581761 CABLES1Q8TDN4 633 aa19.08■□□□□ 0.64
MKS1-211ENST00000581761 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
MKS1-211ENST00000581761 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
MKS1-211ENST00000581761 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
MKS1-211ENST00000581761 RIPK4P57078 832 aa19.07■□□□□ 0.64
MKS1-211ENST00000581761 ALS2Q96Q42 1657 aa19.06■□□□□ 0.64
MKS1-211ENST00000581761 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
MKS1-211ENST00000581761 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
MKS1-211ENST00000581761 FLT4P35916 1363 aa19.06■□□□□ 0.64
MKS1-211ENST00000581761 MARF1Q9Y4F3 1742 aaKnown RBP19.05■□□□□ 0.64
MKS1-211ENST00000581761 AFF2P51816 1311 aa19.05■□□□□ 0.64
MKS1-211ENST00000581761 AMPHP49418 695 aa19.05■□□□□ 0.64
MKS1-211ENST00000581761 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
MKS1-211ENST00000581761 TRIM35Q9UPQ4 493 aa19.05■□□□□ 0.64
MKS1-211ENST00000581761 NFE2L2Q16236 605 aa19.04■□□□□ 0.64
MKS1-211ENST00000581761 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
MKS1-211ENST00000581761 PLIN1O60240 522 aa19.03■□□□□ 0.64
MKS1-211ENST00000581761 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
MKS1-211ENST00000581761 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.64
MKS1-211ENST00000581761 IL16Q14005 1332 aa19.01■□□□□ 0.63
MKS1-211ENST00000581761 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
MKS1-211ENST00000581761 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
MKS1-211ENST00000581761 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
MKS1-211ENST00000581761 RXRBP28702 533 aa19■□□□□ 0.63
MKS1-211ENST00000581761 SULT6B1Q6IMI4 303 aa19■□□□□ 0.63
MKS1-211ENST00000581761 EXOC6Q8TAG9 804 aa19■□□□□ 0.63
MKS1-211ENST00000581761 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
MKS1-211ENST00000581761 RGPD1P0DJD0 1748 aa18.99■□□□□ 0.63
MKS1-211ENST00000581761 QTRT2Q9H974 415 aaKnown RBP18.98■□□□□ 0.63
MKS1-211ENST00000581761 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 HOXC9P31274 260 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 CRYBG1Q9Y4K1 1723 aa18.97■□□□□ 0.63
MKS1-211ENST00000581761 NFAT5O94916 1531 aa18.96■□□□□ 0.63
MKS1-211ENST00000581761 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
MKS1-211ENST00000581761 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
MKS1-211ENST00000581761 CRBNQ96SW2 442 aa18.96■□□□□ 0.63
MKS1-211ENST00000581761 CALD1Q05682 793 aaKnown RBP18.95■□□□□ 0.62
MKS1-211ENST00000581761 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
MKS1-211ENST00000581761 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
MKS1-211ENST00000581761 USP21Q9UK80 565 aa18.95■□□□□ 0.62
MKS1-211ENST00000581761 USP19O94966 1318 aa18.95■□□□□ 0.62
MKS1-211ENST00000581761 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
MKS1-211ENST00000581761 BCAR3O75815 825 aa18.94■□□□□ 0.62
MKS1-211ENST00000581761 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
MKS1-211ENST00000581761 SLIT3O75094 1523 aa18.94■□□□□ 0.62
MKS1-211ENST00000581761 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
MKS1-211ENST00000581761 BCL9LQ86UU0 1499 aa18.92■□□□□ 0.62
MKS1-211ENST00000581761 LTN1O94822 1766 aa18.92■□□□□ 0.62
MKS1-211ENST00000581761 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
MKS1-211ENST00000581761 CT47B1P0C2W7 299 aaPredicted RBP18.92■□□□□ 0.62
MKS1-211ENST00000581761 RARSP54136 660 aaKnown RBP18.92■□□□□ 0.62
MKS1-211ENST00000581761 RBM6P78332 1123 aaKnown RBP18.92■□□□□ 0.62
MKS1-211ENST00000581761 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
MKS1-211ENST00000581761 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
MKS1-211ENST00000581761 IP6K1Q92551 441 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms