RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 NUBP1P53384 320 aa12.63□□□□□ -0.39
NUP85-217ENST00000581335 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
NUP85-217ENST00000581335 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
NUP85-217ENST00000581335 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
NUP85-217ENST00000581335 EVA1CP58658 441 aa12.62□□□□□ -0.39
NUP85-217ENST00000581335 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
NUP85-217ENST00000581335 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
NUP85-217ENST00000581335 SRCAPQ6ZRS2 3230 aa12.62□□□□□ -0.39
NUP85-217ENST00000581335 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
NUP85-217ENST00000581335 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
NUP85-217ENST00000581335 USP19O94966 1318 aa12.61□□□□□ -0.39
NUP85-217ENST00000581335 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
NUP85-217ENST00000581335 CPDO75976 1380 aa12.6□□□□□ -0.39
NUP85-217ENST00000581335 TRPM1Q7Z4N2 1603 aa12.6□□□□□ -0.39
NUP85-217ENST00000581335 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
NUP85-217ENST00000581335 CAMTA1Q9Y6Y1 1673 aa12.6□□□□□ -0.39
NUP85-217ENST00000581335 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
NUP85-217ENST00000581335 GCP02774 474 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
NUP85-217ENST00000581335 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 SIN3AQ96ST3 1273 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
NUP85-217ENST00000581335 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
NUP85-217ENST00000581335 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
NUP85-217ENST00000581335 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
NUP85-217ENST00000581335 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
NUP85-217ENST00000581335 GSE1Q14687 1217 aa12.57□□□□□ -0.4
NUP85-217ENST00000581335 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
NUP85-217ENST00000581335 LRP5O75197 1615 aa12.57□□□□□ -0.4
NUP85-217ENST00000581335 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
NUP85-217ENST00000581335 USP6P35125 1406 aa12.56□□□□□ -0.4
NUP85-217ENST00000581335 TRIM37O94972 964 aa12.56□□□□□ -0.4
NUP85-217ENST00000581335 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
NUP85-217ENST00000581335 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
NUP85-217ENST00000581335 EZH2Q15910 746 aaKnown RBP12.56□□□□□ -0.4
NUP85-217ENST00000581335 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
NUP85-217ENST00000581335 NLRP6P59044 892 aa12.55□□□□□ -0.4
NUP85-217ENST00000581335 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
NUP85-217ENST00000581335 COL5A2P05997 1499 aaPredicted RBP12.54□□□□□ -0.4
NUP85-217ENST00000581335 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
NUP85-217ENST00000581335 SLIT3O75094 1523 aa12.54□□□□□ -0.4
NUP85-217ENST00000581335 APBA3O96018 575 aa12.54□□□□□ -0.4
NUP85-217ENST00000581335 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
NUP85-217ENST00000581335 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
NUP85-217ENST00000581335 ROCK2O75116 1388 aaKnown RBP12.54□□□□□ -0.4
NUP85-217ENST00000581335 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
NUP85-217ENST00000581335 ZBTB7CA1YPR0 619 aa12.53□□□□□ -0.4
NUP85-217ENST00000581335 COL18A1P39060 1754 aa12.53□□□□□ -0.4
NUP85-217ENST00000581335 CRB1P82279 1406 aa12.53□□□□□ -0.4
NUP85-217ENST00000581335 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
NUP85-217ENST00000581335 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.41
NUP85-217ENST00000581335 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
NUP85-217ENST00000581335 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
NUP85-217ENST00000581335 TTC21BQ7Z4L5 1316 aa12.51□□□□□ -0.41
NUP85-217ENST00000581335 PARD3Q8TEW0 1356 aa12.51□□□□□ -0.41
NUP85-217ENST00000581335 RREB1Q92766 1687 aa12.51□□□□□ -0.41
NUP85-217ENST00000581335 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
NUP85-217ENST00000581335 C11orf95C9JLR9 678 aaPredicted RBP12.5□□□□□ -0.41
NUP85-217ENST00000581335 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
NUP85-217ENST00000581335 KCNH5Q8NCM2 988 aa12.5□□□□□ -0.41
NUP85-217ENST00000581335 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
NUP85-217ENST00000581335 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
NUP85-217ENST00000581335 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
NUP85-217ENST00000581335 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
NUP85-217ENST00000581335 AXIN2Q9Y2T1 843 aa12.49□□□□□ -0.41
NUP85-217ENST00000581335 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
NUP85-217ENST00000581335 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
NUP85-217ENST00000581335 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
NUP85-217ENST00000581335 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
NUP85-217ENST00000581335 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
NUP85-217ENST00000581335 KTN1Q86UP2 1357 aaKnown RBP12.47□□□□□ -0.41
NUP85-217ENST00000581335 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
NUP85-217ENST00000581335 DDB1Q16531 1140 aa12.47□□□□□ -0.41
NUP85-217ENST00000581335 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
NUP85-217ENST00000581335 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
NUP85-217ENST00000581335 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
NUP85-217ENST00000581335 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 OVOS2A0A0J9YW53 1432 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 OVOS2Q6IE36 1432 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
NUP85-217ENST00000581335 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.41
NUP85-217ENST00000581335 SOX12O15370 315 aa12.45□□□□□ -0.42
NUP85-217ENST00000581335 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
NUP85-217ENST00000581335 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
NUP85-217ENST00000581335 NFAT5O94916 1531 aa12.44□□□□□ -0.42
NUP85-217ENST00000581335 PLSCR1O15162 318 aa12.44□□□□□ -0.42
NUP85-217ENST00000581335 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
NUP85-217ENST00000581335 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
NUP85-217ENST00000581335 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
NUP85-217ENST00000581335 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
NUP85-217ENST00000581335 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
NUP85-217ENST00000581335 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
NUP85-217ENST00000581335 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
NUP85-217ENST00000581335 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
NUP85-217ENST00000581335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP85-217ENST00000581335 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms