RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
TOP3A-210ENST00000580713 ITSN1Q15811 1721 aa15.72■□□□□ 0.11
TOP3A-210ENST00000580713 DCAF11Q8TEB1 546 aa15.72■□□□□ 0.11
TOP3A-210ENST00000580713 CCDC61Q9Y6R9 512 aa15.72■□□□□ 0.11
TOP3A-210ENST00000580713 CRB1P82279 1406 aa15.71■□□□□ 0.11
TOP3A-210ENST00000580713 TOM1L2Q6ZVM7 507 aa15.71■□□□□ 0.11
TOP3A-210ENST00000580713 PROM2Q8N271 834 aa15.71■□□□□ 0.11
TOP3A-210ENST00000580713 POLR3AO14802 1390 aaPredicted RBP15.71■□□□□ 0.11
TOP3A-210ENST00000580713 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.1
TOP3A-210ENST00000580713 COL5A2P05997 1499 aaPredicted RBP15.71■□□□□ 0.1
TOP3A-210ENST00000580713 USP19O94966 1318 aa15.7■□□□□ 0.1
TOP3A-210ENST00000580713 MYOM1P52179 1685 aa15.7■□□□□ 0.1
TOP3A-210ENST00000580713 CASZ1Q86V15 1759 aa15.7■□□□□ 0.1
TOP3A-210ENST00000580713 LMO7Q8WWI1 1683 aa15.7■□□□□ 0.1
TOP3A-210ENST00000580713 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
TOP3A-210ENST00000580713 SLC15A2Q16348 729 aa15.69■□□□□ 0.1
TOP3A-210ENST00000580713 MTFR1LQ9H019 292 aa15.69■□□□□ 0.1
TOP3A-210ENST00000580713 DSG3P32926 999 aa15.68■□□□□ 0.1
TOP3A-210ENST00000580713 TXNRD1Q16881 649 aa15.68■□□□□ 0.1
TOP3A-210ENST00000580713 RGPD3A6NKT7 1758 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-210ENST00000580713 RGPD4Q7Z3J3 1758 aa15.67■□□□□ 0.1
TOP3A-210ENST00000580713 MARCH10Q8NA82 808 aaPredicted RBP15.67■□□□□ 0.1
TOP3A-210ENST00000580713 PEAK1Q9H792 1746 aa15.67■□□□□ 0.1
TOP3A-210ENST00000580713 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
TOP3A-210ENST00000580713 ATXN8OSP0DMR3 200 aa15.66■□□□□ 0.1
TOP3A-210ENST00000580713 GPR162Q16538 588 aa15.66■□□□□ 0.1
TOP3A-210ENST00000580713 ARXQ96QS3 562 aa15.66■□□□□ 0.1
TOP3A-210ENST00000580713 SBF2Q86WG5 1849 aa15.66■□□□□ 0.1
TOP3A-210ENST00000580713 CHD4Q14839 1912 aa15.65■□□□□ 0.1
TOP3A-210ENST00000580713 NLRP6P59044 892 aa15.65■□□□□ 0.1
TOP3A-210ENST00000580713 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
TOP3A-210ENST00000580713 CDCA7Q9BWT1 371 aaPredicted RBP15.64■□□□□ 0.09
TOP3A-210ENST00000580713 LRRC37A3O60309 1634 aa15.64■□□□□ 0.09
TOP3A-210ENST00000580713 AATKQ6ZMQ8 1374 aa15.63■□□□□ 0.09
TOP3A-210ENST00000580713 CSB-PGBD3P0DP91 1061 aa15.63■□□□□ 0.09
TOP3A-210ENST00000580713 PELP1Q8IZL8 1130 aaKnown RBP15.63■□□□□ 0.09
TOP3A-210ENST00000580713 KLHL34Q8N239 644 aa15.63■□□□□ 0.09
TOP3A-210ENST00000580713 STAC3Q96MF2 364 aa15.63■□□□□ 0.09
TOP3A-210ENST00000580713 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
TOP3A-210ENST00000580713 ARHGEF28Q8N1W1 1705 aaKnown RBP15.63■□□□□ 0.09
TOP3A-210ENST00000580713 EXOC5O00471 708 aa15.62■□□□□ 0.09
TOP3A-210ENST00000580713 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
TOP3A-210ENST00000580713 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
TOP3A-210ENST00000580713 WDR17Q8IZU2 1322 aa15.62■□□□□ 0.09
TOP3A-210ENST00000580713 UTRNP46939 3433 aa15.61■□□□□ 0.09
TOP3A-210ENST00000580713 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
TOP3A-210ENST00000580713 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
TOP3A-210ENST00000580713 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
TOP3A-210ENST00000580713 BCL9O00512 1426 aa15.6■□□□□ 0.09
TOP3A-210ENST00000580713 CABP2Q9NPB3 220 aa15.59■□□□□ 0.09
TOP3A-210ENST00000580713 SOX12O15370 315 aa15.58■□□□□ 0.08
TOP3A-210ENST00000580713 ACSBG1Q96GR2 724 aa15.58■□□□□ 0.08
TOP3A-210ENST00000580713 CARD10Q9BWT7 1032 aa15.58■□□□□ 0.08
TOP3A-210ENST00000580713 BRD4O60885 1362 aaPredicted RBP15.58■□□□□ 0.08
TOP3A-210ENST00000580713 AKAP12Q02952 1782 aa15.57■□□□□ 0.08
TOP3A-210ENST00000580713 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
TOP3A-210ENST00000580713 MAP3K5Q99683 1374 aa15.56■□□□□ 0.08
TOP3A-210ENST00000580713 POLD1P28340 1107 aa15.55■□□□□ 0.08
TOP3A-210ENST00000580713 USP6P35125 1406 aa15.54■□□□□ 0.08
TOP3A-210ENST00000580713 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
TOP3A-210ENST00000580713 SLIT3O75094 1523 aa15.53■□□□□ 0.08
TOP3A-210ENST00000580713 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
TOP3A-210ENST00000580713 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
TOP3A-210ENST00000580713 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
TOP3A-210ENST00000580713 RAB3GAP2Q9H2M9 1393 aa15.52■□□□□ 0.08
TOP3A-210ENST00000580713 CENPJQ9HC77 1338 aaPredicted RBP15.52■□□□□ 0.08
TOP3A-210ENST00000580713 WNK3Q9BYP7 1800 aa15.52■□□□□ 0.07
TOP3A-210ENST00000580713 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
TOP3A-210ENST00000580713 ABCB7O75027 752 aa15.51■□□□□ 0.07
TOP3A-210ENST00000580713 NBPF1Q3BBV0 1214 aa15.51■□□□□ 0.07
TOP3A-210ENST00000580713 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
TOP3A-210ENST00000580713 COL18A1P39060 1754 aa15.51■□□□□ 0.07
TOP3A-210ENST00000580713 SLC16A10Q8TF71 515 aa15.5■□□□□ 0.07
TOP3A-210ENST00000580713 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
TOP3A-210ENST00000580713 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
TOP3A-210ENST00000580713 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
TOP3A-210ENST00000580713 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
TOP3A-210ENST00000580713 NLRP2Q9NX02 1062 aa15.49■□□□□ 0.07
TOP3A-210ENST00000580713 KAT6BQ8WYB5 2073 aa15.48■□□□□ 0.07
TOP3A-210ENST00000580713 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
TOP3A-210ENST00000580713 GRIN3BO60391 1043 aa15.48■□□□□ 0.07
TOP3A-210ENST00000580713 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
TOP3A-210ENST00000580713 TFCP2L1Q9NZI6 479 aa15.47■□□□□ 0.07
TOP3A-210ENST00000580713 NHSQ6T4R5 1651 aa15.47■□□□□ 0.07
TOP3A-210ENST00000580713 RGPD5Q99666 1765 aa15.47■□□□□ 0.07
TOP3A-210ENST00000580713 IL2RBP14784 551 aa15.46■□□□□ 0.07
TOP3A-210ENST00000580713 AKT1S1Q96B36 256 aa15.46■□□□□ 0.07
TOP3A-210ENST00000580713 PIK3C2AO00443 1686 aa15.46■□□□□ 0.07
TOP3A-210ENST00000580713 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
TOP3A-210ENST00000580713 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
TOP3A-210ENST00000580713 SHANK3Q9BYB0 1731 aa15.45■□□□□ 0.06
TOP3A-210ENST00000580713 PNPLA7Q6ZV29 1317 aa15.44■□□□□ 0.06
TOP3A-210ENST00000580713 YBX3P16989 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
TOP3A-210ENST00000580713 SLC27A3Q5K4L6 730 aa15.44■□□□□ 0.06
TOP3A-210ENST00000580713 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
TOP3A-210ENST00000580713 TTC21AQ8NDW8 1320 aa15.43■□□□□ 0.06
TOP3A-210ENST00000580713 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-210ENST00000580713 BTAF1O14981 1849 aa15.43■□□□□ 0.06
TOP3A-210ENST00000580713 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
TOP3A-210ENST00000580713 QRICH2Q9H0J4 1663 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms