RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 NME9Q86XW9 330 aa24.33■■□□□ 1.49
NDEL1-206ENST00000579880 EDC4Q6P2E9 1401 aaKnown RBP24.33■■□□□ 1.49
NDEL1-206ENST00000579880 A0A1W2PP64 1363 aa24.32■■□□□ 1.48
NDEL1-206ENST00000579880 WDR17Q8IZU2 1322 aa24.32■■□□□ 1.48
NDEL1-206ENST00000579880 NINLQ9Y2I6 1382 aa24.31■■□□□ 1.48
NDEL1-206ENST00000579880 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
NDEL1-206ENST00000579880 TRIM37O94972 964 aa24.3■■□□□ 1.48
NDEL1-206ENST00000579880 EN1Q05925 392 aaPredicted RBP24.3■■□□□ 1.48
NDEL1-206ENST00000579880 USP54Q70EL1 1684 aa24.3■■□□□ 1.48
NDEL1-206ENST00000579880 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
NDEL1-206ENST00000579880 PARP4Q9UKK3 1724 aaKnown RBP24.3■■□□□ 1.48
NDEL1-206ENST00000579880 USP47Q96K76 1375 aa24.29■■□□□ 1.48
NDEL1-206ENST00000579880 DISP2A7MBM2 1401 aa24.29■■□□□ 1.48
NDEL1-206ENST00000579880 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
NDEL1-206ENST00000579880 CSB-PGBD3P0DP91 1061 aa24.28■■□□□ 1.48
NDEL1-206ENST00000579880 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
NDEL1-206ENST00000579880 ABCC6O95255 1503 aa24.28■■□□□ 1.48
NDEL1-206ENST00000579880 TMF1P82094 1093 aa24.25■■□□□ 1.47
NDEL1-206ENST00000579880 DDB1Q16531 1140 aa24.24■■□□□ 1.47
NDEL1-206ENST00000579880 CARD10Q9BWT7 1032 aa24.24■■□□□ 1.47
NDEL1-206ENST00000579880 RGPD5Q99666 1765 aa24.24■■□□□ 1.47
NDEL1-206ENST00000579880 APBA3O96018 575 aa24.23■■□□□ 1.47
NDEL1-206ENST00000579880 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
NDEL1-206ENST00000579880 OVOS2A0A0J9YW53 1432 aa24.23■■□□□ 1.47
NDEL1-206ENST00000579880 OVOS2Q6IE36 1432 aa24.23■■□□□ 1.47
NDEL1-206ENST00000579880 LRRC37A3O60309 1634 aa24.23■■□□□ 1.47
NDEL1-206ENST00000579880 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
NDEL1-206ENST00000579880 EZH2Q15910 746 aaKnown RBP24.22■■□□□ 1.47
NDEL1-206ENST00000579880 OVOS2A0A0G2JMS6 1433 aa24.21■■□□□ 1.47
NDEL1-206ENST00000579880 ANKRD36BQ8N2N9 1353 aa24.2■■□□□ 1.46
NDEL1-206ENST00000579880 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
NDEL1-206ENST00000579880 WNK3Q9BYP7 1800 aa24.2■■□□□ 1.46
NDEL1-206ENST00000579880 CAMKK2Q96RR4 588 aa24.2■■□□□ 1.46
NDEL1-206ENST00000579880 PARD3Q8TEW0 1356 aa24.19■■□□□ 1.46
NDEL1-206ENST00000579880 ERBB3P21860 1342 aa24.18■■□□□ 1.46
NDEL1-206ENST00000579880 PSDA5PKW4 1024 aaPredicted RBP24.18■■□□□ 1.46
NDEL1-206ENST00000579880 LTN1O94822 1766 aa24.18■■□□□ 1.46
NDEL1-206ENST00000579880 CDCA8Q53HL2 280 aa24.17■■□□□ 1.46
NDEL1-206ENST00000579880 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
NDEL1-206ENST00000579880 COG3Q96JB2 828 aa24.16■■□□□ 1.46
NDEL1-206ENST00000579880 MARCH10Q8NA82 808 aaPredicted RBP24.14■■□□□ 1.45
NDEL1-206ENST00000579880 ANKRD24Q8TF21 1146 aa24.14■■□□□ 1.45
NDEL1-206ENST00000579880 NLRP2Q9NX02 1062 aa24.14■■□□□ 1.45
NDEL1-206ENST00000579880 EXOC5O00471 708 aa24.12■■□□□ 1.45
NDEL1-206ENST00000579880 R3HDM1Q15032 1099 aaKnown RBP24.12■■□□□ 1.45
NDEL1-206ENST00000579880 IP6K1Q92551 441 aa24.11■■□□□ 1.45
NDEL1-206ENST00000579880 BCL9O00512 1426 aa24.1■■□□□ 1.45
NDEL1-206ENST00000579880 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
NDEL1-206ENST00000579880 CCER1Q8TC90 406 aaPredicted RBP24.1■■□□□ 1.45
NDEL1-206ENST00000579880 RREB1Q92766 1687 aa24.09■■□□□ 1.45
NDEL1-206ENST00000579880 MAP3K19Q56UN5 1328 aa24.09■■□□□ 1.45
NDEL1-206ENST00000579880 BCL11BQ9C0K0 894 aaPredicted RBP24.08■■□□□ 1.45
NDEL1-206ENST00000579880 LRP5O75197 1615 aa24.07■■□□□ 1.44
NDEL1-206ENST00000579880 FYB1O15117 783 aa24.07■■□□□ 1.44
NDEL1-206ENST00000579880 IL2RBP14784 551 aa24.07■■□□□ 1.44
NDEL1-206ENST00000579880 GGNBP2Q9H3C7 697 aa24.07■■□□□ 1.44
NDEL1-206ENST00000579880 SBF2Q86WG5 1849 aa24.07■■□□□ 1.44
NDEL1-206ENST00000579880 AMPHP49418 695 aa24.06■■□□□ 1.44
NDEL1-206ENST00000579880 LTV1Q96GA3 475 aaPredicted RBP24.06■■□□□ 1.44
NDEL1-206ENST00000579880 NUP188Q5SRE5 1749 aa24.06■■□□□ 1.44
NDEL1-206ENST00000579880 FBLN1P23142 703 aa24.05■■□□□ 1.44
NDEL1-206ENST00000579880 NBPF14Q5TI25 921 aa24.05■■□□□ 1.44
NDEL1-206ENST00000579880 PTF1AQ7RTS3 328 aa24.05■■□□□ 1.44
NDEL1-206ENST00000579880 SRCAPQ6ZRS2 3230 aa24.04■■□□□ 1.44
NDEL1-206ENST00000579880 PLSCR1O15162 318 aa24.04■■□□□ 1.44
NDEL1-206ENST00000579880 HOXC9P31274 260 aa24.04■■□□□ 1.44
NDEL1-206ENST00000579880 MYOM1P52179 1685 aa24.02■■□□□ 1.44
NDEL1-206ENST00000579880 FAM208AQ9UK61 1670 aaKnown RBP24.02■■□□□ 1.44
NDEL1-206ENST00000579880 RGPD3A6NKT7 1758 aaPredicted RBP24.02■■□□□ 1.44
NDEL1-206ENST00000579880 RGPD4Q7Z3J3 1758 aa24.02■■□□□ 1.44
NDEL1-206ENST00000579880 RTL1A6NKG5 1358 aa24.02■■□□□ 1.44
NDEL1-206ENST00000579880 RRS1Q15050 365 aaKnown RBP24■■□□□ 1.43
NDEL1-206ENST00000579880 CARD14Q9BXL6 1004 aa24■■□□□ 1.43
NDEL1-206ENST00000579880 NSD3Q9BZ95 1437 aa24■■□□□ 1.43
NDEL1-206ENST00000579880 KIF20BQ96Q89 1820 aa23.99■■□□□ 1.43
NDEL1-206ENST00000579880 EIF4G2P78344 907 aaKnown RBP eCLIP23.98■■□□□ 1.43
NDEL1-206ENST00000579880 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
NDEL1-206ENST00000579880 KCNQ2O43526 872 aa23.95■■□□□ 1.42
NDEL1-206ENST00000579880 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
NDEL1-206ENST00000579880 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
NDEL1-206ENST00000579880 HSPA5P11021 654 aaKnown RBP23.94■■□□□ 1.42
NDEL1-206ENST00000579880 SMG6Q86US8 1419 aaKnown RBP23.93■■□□□ 1.42
NDEL1-206ENST00000579880 PROM2Q8N271 834 aa23.93■■□□□ 1.42
NDEL1-206ENST00000579880 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
NDEL1-206ENST00000579880 INSRP06213 1382 aa23.91■■□□□ 1.42
NDEL1-206ENST00000579880 FLT4P35916 1363 aa23.91■■□□□ 1.42
NDEL1-206ENST00000579880 KIF24Q5T7B8 1368 aa23.91■■□□□ 1.42
NDEL1-206ENST00000579880 TXNRD1Q16881 649 aa23.91■■□□□ 1.42
NDEL1-206ENST00000579880 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
NDEL1-206ENST00000579880 CGNL1Q0VF96 1302 aa23.9■■□□□ 1.42
NDEL1-206ENST00000579880 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
NDEL1-206ENST00000579880 NBPF6Q5VWK0 638 aa23.9■■□□□ 1.42
NDEL1-206ENST00000579880 NBPF4Q96M43 638 aa23.9■■□□□ 1.42
NDEL1-206ENST00000579880 RGPD2P0DJD1 1756 aa23.89■■□□□ 1.42
NDEL1-206ENST00000579880 MEGF6O75095 1541 aa23.89■■□□□ 1.41
NDEL1-206ENST00000579880 USHBP1Q8N6Y0 703 aa23.87■■□□□ 1.41
NDEL1-206ENST00000579880 ZCRB1Q8TBF4 217 aaKnown RBP23.87■■□□□ 1.41
NDEL1-206ENST00000579880 EMILIN1Q9Y6C2 1016 aa23.86■■□□□ 1.41
NDEL1-206ENST00000579880 RAPGEF4Q8WZA2 1011 aa23.85■■□□□ 1.41
NDEL1-206ENST00000579880 STK32BQ9NY57 414 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms