RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 WDR17Q8IZU2 1322 aa23.78■■□□□ 1.4
CDC42EP4-204ENST00000579611 COL18A1P39060 1754 aa23.78■■□□□ 1.4
CDC42EP4-204ENST00000579611 ZBTB7CA1YPR0 619 aa23.77■■□□□ 1.4
CDC42EP4-204ENST00000579611 ABCC6O95255 1503 aa23.77■■□□□ 1.4
CDC42EP4-204ENST00000579611 USP54Q70EL1 1684 aa23.76■■□□□ 1.39
CDC42EP4-204ENST00000579611 FAM196AQ6ZSG2 479 aa23.76■■□□□ 1.39
CDC42EP4-204ENST00000579611 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
CDC42EP4-204ENST00000579611 ANKRD36BQ8N2N9 1353 aa23.76■■□□□ 1.39
CDC42EP4-204ENST00000579611 OVOS2A0A0J9YW53 1432 aa23.75■■□□□ 1.39
CDC42EP4-204ENST00000579611 OVOS2Q6IE36 1432 aa23.75■■□□□ 1.39
CDC42EP4-204ENST00000579611 SOX12O15370 315 aa23.74■■□□□ 1.39
CDC42EP4-204ENST00000579611 TOM1L2Q6ZVM7 507 aa23.74■■□□□ 1.39
CDC42EP4-204ENST00000579611 DEFB132Q7Z7B7 95 aa23.74■■□□□ 1.39
CDC42EP4-204ENST00000579611 PDE3BQ13370 1112 aa23.73■■□□□ 1.39
CDC42EP4-204ENST00000579611 FAM182BQ5T319 152 aa23.73■■□□□ 1.39
CDC42EP4-204ENST00000579611 CDCA7Q9BWT1 371 aaPredicted RBP23.72■■□□□ 1.39
CDC42EP4-204ENST00000579611 CARD10Q9BWT7 1032 aa23.72■■□□□ 1.39
CDC42EP4-204ENST00000579611 DISP2A7MBM2 1401 aa23.7■■□□□ 1.38
CDC42EP4-204ENST00000579611 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
CDC42EP4-204ENST00000579611 BAG6P46379 1132 aa23.7■■□□□ 1.38
CDC42EP4-204ENST00000579611 COG3Q96JB2 828 aa23.67■■□□□ 1.38
CDC42EP4-204ENST00000579611 ERBB3P21860 1342 aa23.66■■□□□ 1.38
CDC42EP4-204ENST00000579611 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
CDC42EP4-204ENST00000579611 CCDC7Q96M83 1385 aa23.65■■□□□ 1.38
CDC42EP4-204ENST00000579611 PARP4Q9UKK3 1724 aaKnown RBP23.65■■□□□ 1.38
CDC42EP4-204ENST00000579611 SRCAPQ6ZRS2 3230 aa23.65■■□□□ 1.38
CDC42EP4-204ENST00000579611 FYB1O15117 783 aa23.64■■□□□ 1.37
CDC42EP4-204ENST00000579611 DDB1Q16531 1140 aa23.64■■□□□ 1.37
CDC42EP4-204ENST00000579611 IP6K1Q92551 441 aa23.64■■□□□ 1.37
CDC42EP4-204ENST00000579611 TRIM37O94972 964 aa23.63■■□□□ 1.37
CDC42EP4-204ENST00000579611 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■■■■ 34.3
CDC42EP4-204ENST00000579611 EN1Q05925 392 aaPredicted RBP23.61■■□□□ 1.37
CDC42EP4-204ENST00000579611 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
CDC42EP4-204ENST00000579611 BCL9O00512 1426 aa23.6■■□□□ 1.37
CDC42EP4-204ENST00000579611 ANKRD24Q8TF21 1146 aa23.6■■□□□ 1.37
CDC42EP4-204ENST00000579611 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
CDC42EP4-204ENST00000579611 CAMKK2Q96RR4 588 aa23.59■■□□□ 1.37
CDC42EP4-204ENST00000579611 CARD14Q9BXL6 1004 aa23.59■■□□□ 1.37
CDC42EP4-204ENST00000579611 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
CDC42EP4-204ENST00000579611 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
CDC42EP4-204ENST00000579611 APBA3O96018 575 aa23.57■■□□□ 1.36
CDC42EP4-204ENST00000579611 NLRP2Q9NX02 1062 aa23.57■■□□□ 1.36
CDC42EP4-204ENST00000579611 LRRC37A3O60309 1634 aa23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 RGPD5Q99666 1765 aa23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 EXOC5O00471 708 aa23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 MARCH10Q8NA82 808 aaPredicted RBP23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
CDC42EP4-204ENST00000579611 HOXC9P31274 260 aa23.55■■□□□ 1.36
CDC42EP4-204ENST00000579611 RTL1A6NKG5 1358 aa23.54■■□□□ 1.36
CDC42EP4-204ENST00000579611 PEAK1Q9H792 1746 aa23.54■■□□□ 1.36
CDC42EP4-204ENST00000579611 EZH2Q15910 746 aaKnown RBP23.54■■□□□ 1.36
CDC42EP4-204ENST00000579611 LTN1O94822 1766 aa23.54■■□□□ 1.36
CDC42EP4-204ENST00000579611 IL2RBP14784 551 aa23.53■■□□□ 1.36
CDC42EP4-204ENST00000579611 FBLN1P23142 703 aa23.53■■□□□ 1.36
CDC42EP4-204ENST00000579611 AMPHP49418 695 aa23.53■■□□□ 1.36
CDC42EP4-204ENST00000579611 TNS2Q63HR2 1409 aa23.51■■□□□ 1.35
CDC42EP4-204ENST00000579611 NSD3Q9BZ95 1437 aa23.51■■□□□ 1.35
CDC42EP4-204ENST00000579611 BCL11BQ9C0K0 894 aaPredicted RBP23.51■■□□□ 1.35
CDC42EP4-204ENST00000579611 KIF24Q5T7B8 1368 aa23.51■■□□□ 1.35
CDC42EP4-204ENST00000579611 MYOM1P52179 1685 aa23.51■■□□□ 1.35
CDC42EP4-204ENST00000579611 WNK3Q9BYP7 1800 aa23.5■■□□□ 1.35
CDC42EP4-204ENST00000579611 PLSCR1O15162 318 aa23.49■■□□□ 1.35
CDC42EP4-204ENST00000579611 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
CDC42EP4-204ENST00000579611 CGNL1Q0VF96 1302 aa23.47■■□□□ 1.35
CDC42EP4-204ENST00000579611 LTV1Q96GA3 475 aaPredicted RBP23.46■■□□□ 1.35
CDC42EP4-204ENST00000579611 INSRP06213 1382 aa23.44■■□□□ 1.34
CDC42EP4-204ENST00000579611 FLT4P35916 1363 aa23.43■■□□□ 1.34
CDC42EP4-204ENST00000579611 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
CDC42EP4-204ENST00000579611 FAM208AQ9UK61 1670 aaKnown RBP23.42■■□□□ 1.34
CDC42EP4-204ENST00000579611 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
CDC42EP4-204ENST00000579611 HSP90AB2PQ58FF8 381 aa23.41■■□□□ 1.34
CDC42EP4-204ENST00000579611 POLR3GLQ9BT43 218 aa23.41■■□□□ 1.34
CDC42EP4-204ENST00000579611 R3HDM1Q15032 1099 aaKnown RBP23.4■■□□□ 1.34
CDC42EP4-204ENST00000579611 NBPF6Q5VWK0 638 aa23.4■■□□□ 1.34
CDC42EP4-204ENST00000579611 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
CDC42EP4-204ENST00000579611 PANK3Q9H999 370 aa23.4■■□□□ 1.34
CDC42EP4-204ENST00000579611 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
CDC42EP4-204ENST00000579611 SBF2Q86WG5 1849 aa23.39■■□□□ 1.33
CDC42EP4-204ENST00000579611 NBPF14Q5TI25 921 aa23.39■■□□□ 1.33
CDC42EP4-204ENST00000579611 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
CDC42EP4-204ENST00000579611 EMILIN1Q9Y6C2 1016 aa23.38■■□□□ 1.33
CDC42EP4-204ENST00000579611 RREB1Q92766 1687 aa23.38■■□□□ 1.33
CDC42EP4-204ENST00000579611 KCNQ2O43526 872 aa23.37■■□□□ 1.33
CDC42EP4-204ENST00000579611 PROM2Q8N271 834 aa23.37■■□□□ 1.33
CDC42EP4-204ENST00000579611 RGPD3A6NKT7 1758 aaPredicted RBP23.37■■□□□ 1.33
CDC42EP4-204ENST00000579611 RGPD4Q7Z3J3 1758 aa23.37■■□□□ 1.33
CDC42EP4-204ENST00000579611 WASHC2AQ641Q2 1341 aa23.36■■□□□ 1.33
CDC42EP4-204ENST00000579611 NSD2O96028 1365 aa23.35■■□□□ 1.33
CDC42EP4-204ENST00000579611 ZCRB1Q8TBF4 217 aaKnown RBP23.34■■□□□ 1.33
CDC42EP4-204ENST00000579611 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
CDC42EP4-204ENST00000579611 MEGF6O75095 1541 aa23.33■■□□□ 1.33
CDC42EP4-204ENST00000579611 DDX54Q8TDD1 881 aaKnown RBP23.33■■□□□ 1.33
CDC42EP4-204ENST00000579611 RAPGEF4Q8WZA2 1011 aa23.32■■□□□ 1.32
CDC42EP4-204ENST00000579611 ACSBG1Q96GR2 724 aa23.32■■□□□ 1.32
CDC42EP4-204ENST00000579611 NUP188Q5SRE5 1749 aa23.32■■□□□ 1.32
CDC42EP4-204ENST00000579611 LRP5O75197 1615 aa23.31■■□□□ 1.32
CDC42EP4-204ENST00000579611 TXNRD1Q16881 649 aa23.31■■□□□ 1.32
CDC42EP4-204ENST00000579611 NCAPD2Q15021 1401 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms