RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 POLD1P28340 1107 aa12.1□□□□□ -0.47
PPP4R1-211ENST00000578875 WWC3Q9ULE0 1092 aa12.1□□□□□ -0.47
PPP4R1-211ENST00000578875 KNDC1Q76NI1 1749 aa12.09□□□□□ -0.47
PPP4R1-211ENST00000578875 PARP4Q9UKK3 1724 aaKnown RBP12.09□□□□□ -0.47
PPP4R1-211ENST00000578875 ADCY9O60503 1353 aa12.09□□□□□ -0.47
PPP4R1-211ENST00000578875 KCNQ4P56696 695 aa12.09□□□□□ -0.47
PPP4R1-211ENST00000578875 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
PPP4R1-211ENST00000578875 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
PPP4R1-211ENST00000578875 GCP02774 474 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 CRB1P82279 1406 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 TRAK1Q9UPV9 953 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
PPP4R1-211ENST00000578875 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 PHRF1Q9P1Y6 1649 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
PPP4R1-211ENST00000578875 CPDO75976 1380 aa12.05□□□□□ -0.48
PPP4R1-211ENST00000578875 ANKRD30BQ9BXX2 1392 aa12.05□□□□□ -0.48
PPP4R1-211ENST00000578875 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
PPP4R1-211ENST00000578875 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
PPP4R1-211ENST00000578875 BCL9O00512 1426 aa12.04□□□□□ -0.48
PPP4R1-211ENST00000578875 EXOC5O00471 708 aa12.04□□□□□ -0.48
PPP4R1-211ENST00000578875 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
PPP4R1-211ENST00000578875 SPATA31E1Q6ZUB1 1445 aa12.03□□□□□ -0.48
PPP4R1-211ENST00000578875 TOMM70O94826 608 aa12.03□□□□□ -0.48
PPP4R1-211ENST00000578875 ACEP12821 1306 aa12.03□□□□□ -0.48
PPP4R1-211ENST00000578875 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
PPP4R1-211ENST00000578875 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
PPP4R1-211ENST00000578875 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
PPP4R1-211ENST00000578875 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
PPP4R1-211ENST00000578875 USP19O94966 1318 aa12.01□□□□□ -0.49
PPP4R1-211ENST00000578875 PPARGC1BQ86YN6 1023 aaKnown RBP12□□□□□ -0.49
PPP4R1-211ENST00000578875 PCDH10Q9P2E7 1040 aa12□□□□□ -0.49
PPP4R1-211ENST00000578875 TULP4Q9NRJ4 1543 aa12□□□□□ -0.49
PPP4R1-211ENST00000578875 MSH5O43196 834 aa11.99□□□□□ -0.49
PPP4R1-211ENST00000578875 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
PPP4R1-211ENST00000578875 COL23A1Q86Y22 540 aaPredicted RBP11.99□□□□□ -0.49
PPP4R1-211ENST00000578875 USP6P35125 1406 aa11.97□□□□□ -0.49
PPP4R1-211ENST00000578875 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
PPP4R1-211ENST00000578875 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
PPP4R1-211ENST00000578875 CDK19Q9BWU1 502 aa11.97□□□□□ -0.49
PPP4R1-211ENST00000578875 COL24A1Q17RW2 1714 aa11.97□□□□□ -0.49
PPP4R1-211ENST00000578875 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-211ENST00000578875 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
PPP4R1-211ENST00000578875 CARD10Q9BWT7 1032 aa11.96□□□□□ -0.49
PPP4R1-211ENST00000578875 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.5
PPP4R1-211ENST00000578875 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
PPP4R1-211ENST00000578875 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
PPP4R1-211ENST00000578875 NLRP6P59044 892 aa11.95□□□□□ -0.5
PPP4R1-211ENST00000578875 CD2APQ9Y5K6 639 aa11.95□□□□□ -0.5
PPP4R1-211ENST00000578875 POLR3AO14802 1390 aaPredicted RBP11.94□□□□□ -0.5
PPP4R1-211ENST00000578875 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
PPP4R1-211ENST00000578875 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
PPP4R1-211ENST00000578875 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
PPP4R1-211ENST00000578875 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
PPP4R1-211ENST00000578875 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
PPP4R1-211ENST00000578875 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
PPP4R1-211ENST00000578875 KAT6BQ8WYB5 2073 aa11.93□□□□□ -0.5
PPP4R1-211ENST00000578875 IGSF1Q8N6C5 1336 aa11.92□□□□□ -0.5
PPP4R1-211ENST00000578875 SOX12O15370 315 aa11.92□□□□□ -0.5
PPP4R1-211ENST00000578875 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
PPP4R1-211ENST00000578875 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
PPP4R1-211ENST00000578875 COL18A1P39060 1754 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 ARHGEF25Q86VW2 580 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 PCNTO95613 3336 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 BTAF1O14981 1849 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 NHSQ6T4R5 1651 aa11.9□□□□□ -0.5
PPP4R1-211ENST00000578875 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
PPP4R1-211ENST00000578875 TUBGCP6Q96RT7 1819 aa11.89□□□□□ -0.51
PPP4R1-211ENST00000578875 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
PPP4R1-211ENST00000578875 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-211ENST00000578875 MPHOSPH9Q99550 1183 aa11.88□□□□□ -0.51
PPP4R1-211ENST00000578875 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-211ENST00000578875 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-211ENST00000578875 DDX54Q8TDD1 881 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-211ENST00000578875 SYTL4Q96C24 671 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-211ENST00000578875 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 FSTL1Q12841 308 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 RRAGCQ9HB90 399 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 QSER1Q2KHR3 1735 aa11.86□□□□□ -0.51
PPP4R1-211ENST00000578875 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 NLRP2Q9NX02 1062 aa11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 ERBB3P21860 1342 aa11.85□□□□□ -0.51
PPP4R1-211ENST00000578875 IL2RBP14784 551 aa11.84□□□□□ -0.51
PPP4R1-211ENST00000578875 CABP2Q9NPB3 220 aa11.84□□□□□ -0.51
PPP4R1-211ENST00000578875 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
PPP4R1-211ENST00000578875 CABP1Q9NZU7 370 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms