RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
PTPRM-207ENST00000578571 GFRA3O60609 400 aa9.27□□□□□ -0.93
PTPRM-207ENST00000578571 ADH1CP00326 375 aa9.27□□□□□ -0.93
PTPRM-207ENST00000578571 SMPD1P17405 629 aa9.27□□□□□ -0.93
PTPRM-207ENST00000578571 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
PTPRM-207ENST00000578571 ALG2Q9H553 416 aa9.27□□□□□ -0.93
PTPRM-207ENST00000578571 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
PTPRM-207ENST00000578571 SOX11P35716 441 aa9.26□□□□□ -0.93
PTPRM-207ENST00000578571 MCCD1P59942 119 aaPredicted RBP9.26□□□□□ -0.93
PTPRM-207ENST00000578571 ESPNB1AK53 854 aa9.25□□□□□ -0.93
PTPRM-207ENST00000578571 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-207ENST00000578571 SCRIBQ14160 1630 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 NRG2O14511 850 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-207ENST00000578571 GIGYF1O75420 1035 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-207ENST00000578571 FSHRP23945 695 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 SEMA3FQ13275 785 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 NBPF20Q3BBV1 942 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 ZNF592Q92610 1267 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
PTPRM-207ENST00000578571 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-207ENST00000578571 NR3C2P08235 984 aa9.23□□□□□ -0.93
PTPRM-207ENST00000578571 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
PTPRM-207ENST00000578571 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
PTPRM-207ENST00000578571 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
PTPRM-207ENST00000578571 NR5A1Q13285 461 aa9.22□□□□□ -0.93
PTPRM-207ENST00000578571 NNTQ13423 1086 aa9.22□□□□□ -0.93
PTPRM-207ENST00000578571 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
PTPRM-207ENST00000578571 GLMNQ92990 594 aa9.22□□□□□ -0.93
PTPRM-207ENST00000578571 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
PTPRM-207ENST00000578571 LAPTM4AQ15012 233 aa9.21□□□□□ -0.94
PTPRM-207ENST00000578571 HPS1Q92902 700 aa9.21□□□□□ -0.94
PTPRM-207ENST00000578571 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
PTPRM-207ENST00000578571 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
PTPRM-207ENST00000578571 UCN2Q96RP3 112 aa9.19□□□□□ -0.94
PTPRM-207ENST00000578571 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
PTPRM-207ENST00000578571 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
PTPRM-207ENST00000578571 DGAT1O75907 488 aa9.18□□□□□ -0.94
PTPRM-207ENST00000578571 RAB15P59190 212 aa9.18□□□□□ -0.94
PTPRM-207ENST00000578571 CCDC116Q8IYX3 515 aa9.18□□□□□ -0.94
PTPRM-207ENST00000578571 UNC13AQ9UPW8 1703 aa9.18□□□□□ -0.94
PTPRM-207ENST00000578571 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
PTPRM-207ENST00000578571 ARID3CA6NKF2 412 aa9.17□□□□□ -0.94
PTPRM-207ENST00000578571 ERVH48-1M5A8F1 160 aa9.17□□□□□ -0.94
PTPRM-207ENST00000578571 AVPP01185 164 aa9.17□□□□□ -0.94
PTPRM-207ENST00000578571 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-207ENST00000578571 CALR3Q96L12 384 aaKnown RBP9.17□□□□□ -0.94
PTPRM-207ENST00000578571 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
PTPRM-207ENST00000578571 CHIC2Q9UKJ5 165 aa9.17□□□□□ -0.94
PTPRM-207ENST00000578571 TSGA10IPQ3SY00 556 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 SLFNL1Q499Z3 407 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
PTPRM-207ENST00000578571 TIMP2P16035 220 aa9.15□□□□□ -0.94
PTPRM-207ENST00000578571 DHX9Q08211 1270 aaKnown RBP9.15□□□□□ -0.94
PTPRM-207ENST00000578571 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
PTPRM-207ENST00000578571 TMPRSS4Q9NRS4 437 aa9.15□□□□□ -0.94
PTPRM-207ENST00000578571 WDR4P57081 412 aaKnown RBP9.14□□□□□ -0.95
PTPRM-207ENST00000578571 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
PTPRM-207ENST00000578571 EMILIN1Q9Y6C2 1016 aa9.14□□□□□ -0.95
PTPRM-207ENST00000578571 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-207ENST00000578571 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
PTPRM-207ENST00000578571 TBC1D9Q6ZT07 1266 aa9.13□□□□□ -0.95
PTPRM-207ENST00000578571 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-207ENST00000578571 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
PTPRM-207ENST00000578571 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
PTPRM-207ENST00000578571 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
PTPRM-207ENST00000578571 PCDHB11Q9Y5F2 797 aa9.13□□□□□ -0.95
PTPRM-207ENST00000578571 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
PTPRM-207ENST00000578571 MYT1Q01538 1121 aa9.12□□□□□ -0.95
PTPRM-207ENST00000578571 PLPP7Q8NBV4 271 aa9.12□□□□□ -0.95
PTPRM-207ENST00000578571 LCE2BO14633 110 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 LILRA1O75019 489 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 SKIP12755 728 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-207ENST00000578571 CRIPAKQ8N1N5 446 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
PTPRM-207ENST00000578571 ATP9BO43861 1147 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 SCTRP47872 440 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 ERVK-9P63128 1117 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 PPP1R12CQ9BZL4 782 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
PTPRM-207ENST00000578571 BICRAQ9NZM4 1560 aa9.09□□□□□ -0.95
PTPRM-207ENST00000578571 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-207ENST00000578571 ST8SIA5O15466 376 aa9.09□□□□□ -0.95
PTPRM-207ENST00000578571 CAPN5O15484 640 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-207ENST00000578571 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
PTPRM-207ENST00000578571 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
PTPRM-207ENST00000578571 TFIP11Q9UBB9 837 aaKnown RBP9.09□□□□□ -0.95
PTPRM-207ENST00000578571 USP17L5A8MUK1 530 aa9.08□□□□□ -0.96
PTPRM-207ENST00000578571 CBLBQ13191 982 aa9.08□□□□□ -0.96
PTPRM-207ENST00000578571 Q6ZNB5 142 aa9.08□□□□□ -0.96
PTPRM-207ENST00000578571 Q6ZVU0 165 aa9.08□□□□□ -0.96
PTPRM-207ENST00000578571 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
PTPRM-207ENST00000578571 OXLD1Q5BKU9 147 aa9.07□□□□□ -0.96
PTPRM-207ENST00000578571 CFAP70Q5T0N1 1121 aa9.07□□□□□ -0.96
PTPRM-207ENST00000578571 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms