RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 HDGFL2Q7Z4V5 671 aaPredicted RBP19.68■□□□□ 0.74
PSMD11-207ENST00000578397 CRB1P82279 1406 aa19.68■□□□□ 0.74
PSMD11-207ENST00000578397 AKAP12Q02952 1782 aa19.66■□□□□ 0.74
PSMD11-207ENST00000578397 TESK2Q96S53 571 aa19.66■□□□□ 0.74
PSMD11-207ENST00000578397 SLC12A5Q9H2X9 1139 aa19.66■□□□□ 0.74
PSMD11-207ENST00000578397 TERF2IPQ9NYB0 399 aa19.66■□□□□ 0.74
PSMD11-207ENST00000578397 USP31Q70CQ4 1352 aa19.66■□□□□ 0.74
PSMD11-207ENST00000578397 ST20-MTHFSA0A0A6YYL1 179 aa19.65■□□□□ 0.74
PSMD11-207ENST00000578397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.65■□□□□ 0.74
PSMD11-207ENST00000578397 AXIN2Q9Y2T1 843 aa19.65■□□□□ 0.74
PSMD11-207ENST00000578397 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
PSMD11-207ENST00000578397 TOM1L2Q6ZVM7 507 aa19.64■□□□□ 0.73
PSMD11-207ENST00000578397 WDR17Q8IZU2 1322 aa19.64■□□□□ 0.73
PSMD11-207ENST00000578397 DISP2A7MBM2 1401 aa19.64■□□□□ 0.73
PSMD11-207ENST00000578397 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
PSMD11-207ENST00000578397 C11orf95C9JLR9 678 aaPredicted RBP19.63■□□□□ 0.73
PSMD11-207ENST00000578397 SOX12O15370 315 aa19.63■□□□□ 0.73
PSMD11-207ENST00000578397 EN1Q05925 392 aaPredicted RBP19.63■□□□□ 0.73
PSMD11-207ENST00000578397 EDC4Q6P2E9 1401 aaKnown RBP19.62■□□□□ 0.73
PSMD11-207ENST00000578397 NINLQ9Y2I6 1382 aa19.62■□□□□ 0.73
PSMD11-207ENST00000578397 TRIM37O94972 964 aa19.62■□□□□ 0.73
PSMD11-207ENST00000578397 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
PSMD11-207ENST00000578397 NME9Q86XW9 330 aa19.61■□□□□ 0.73
PSMD11-207ENST00000578397 CDCA7Q9BWT1 371 aaPredicted RBP19.61■□□□□ 0.73
PSMD11-207ENST00000578397 COL18A1P39060 1754 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 RGPD1P0DJD0 1748 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 MON2Q7Z3U7 1717 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 CARD10Q9BWT7 1032 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 NFAT5O94916 1531 aa19.6■□□□□ 0.73
PSMD11-207ENST00000578397 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
PSMD11-207ENST00000578397 CSB-PGBD3P0DP91 1061 aa19.59■□□□□ 0.73
PSMD11-207ENST00000578397 SRCAPQ6ZRS2 3230 aa19.59■□□□□ 0.73
PSMD11-207ENST00000578397 ABCC6O95255 1503 aa19.58■□□□□ 0.73
PSMD11-207ENST00000578397 APBA3O96018 575 aa19.58■□□□□ 0.72
PSMD11-207ENST00000578397 DDB1Q16531 1140 aa19.58■□□□□ 0.72
PSMD11-207ENST00000578397 PARD3Q8TEW0 1356 aa19.57■□□□□ 0.72
PSMD11-207ENST00000578397 CAMKK2Q96RR4 588 aa19.57■□□□□ 0.72
PSMD11-207ENST00000578397 USP47Q96K76 1375 aa19.57■□□□□ 0.72
PSMD11-207ENST00000578397 TMF1P82094 1093 aa19.56■□□□□ 0.72
PSMD11-207ENST00000578397 EZH2Q15910 746 aaKnown RBP19.56■□□□□ 0.72
PSMD11-207ENST00000578397 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
PSMD11-207ENST00000578397 CCDC7Q96M83 1385 aa19.55■□□□□ 0.72
PSMD11-207ENST00000578397 OVOS2A0A0G2JMS6 1433 aa19.54■□□□□ 0.72
PSMD11-207ENST00000578397 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
PSMD11-207ENST00000578397 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
PSMD11-207ENST00000578397 USP54Q70EL1 1684 aa19.54■□□□□ 0.72
PSMD11-207ENST00000578397 TNS1Q9HBL0 1735 aaKnown RBP19.54■□□□□ 0.72
PSMD11-207ENST00000578397 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
PSMD11-207ENST00000578397 PSDA5PKW4 1024 aaPredicted RBP19.52■□□□□ 0.72
PSMD11-207ENST00000578397 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
PSMD11-207ENST00000578397 ERBB3P21860 1342 aa19.51■□□□□ 0.71
PSMD11-207ENST00000578397 EXOC5O00471 708 aa19.51■□□□□ 0.71
PSMD11-207ENST00000578397 COG3Q96JB2 828 aa19.51■□□□□ 0.71
PSMD11-207ENST00000578397 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
PSMD11-207ENST00000578397 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
PSMD11-207ENST00000578397 BCL9O00512 1426 aa19.5■□□□□ 0.71
PSMD11-207ENST00000578397 ANKRD24Q8TF21 1146 aa19.49■□□□□ 0.71
PSMD11-207ENST00000578397 NLRP2Q9NX02 1062 aa19.49■□□□□ 0.71
PSMD11-207ENST00000578397 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
PSMD11-207ENST00000578397 R3HDM1Q15032 1099 aaKnown RBP19.48■□□□□ 0.71
PSMD11-207ENST00000578397 IP6K1Q92551 441 aa19.48■□□□□ 0.71
PSMD11-207ENST00000578397 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
PSMD11-207ENST00000578397 PEAK1Q9H792 1746 aa19.46■□□□□ 0.71
PSMD11-207ENST00000578397 PLSCR1O15162 318 aa19.46■□□□□ 0.71
PSMD11-207ENST00000578397 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
PSMD11-207ENST00000578397 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
PSMD11-207ENST00000578397 IL2RBP14784 551 aa19.44■□□□□ 0.7
PSMD11-207ENST00000578397 TNS2Q63HR2 1409 aa19.43■□□□□ 0.7
PSMD11-207ENST00000578397 FYB1O15117 783 aa19.43■□□□□ 0.7
PSMD11-207ENST00000578397 MAP3K19Q56UN5 1328 aa19.43■□□□□ 0.7
PSMD11-207ENST00000578397 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
PSMD11-207ENST00000578397 LRP5O75197 1615 aa19.41■□□□□ 0.7
PSMD11-207ENST00000578397 HOXC9P31274 260 aa19.41■□□□□ 0.7
PSMD11-207ENST00000578397 AMPHP49418 695 aa19.41■□□□□ 0.7
PSMD11-207ENST00000578397 LTN1O94822 1766 aa19.41■□□□□ 0.7
PSMD11-207ENST00000578397 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
PSMD11-207ENST00000578397 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
PSMD11-207ENST00000578397 CAPN15O75808 1086 aa19.39■□□□□ 0.69
PSMD11-207ENST00000578397 RREB1Q92766 1687 aa19.39■□□□□ 0.69
PSMD11-207ENST00000578397 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
PSMD11-207ENST00000578397 FBLN1P23142 703 aa19.38■□□□□ 0.69
PSMD11-207ENST00000578397 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
PSMD11-207ENST00000578397 LTV1Q96GA3 475 aaPredicted RBP19.38■□□□□ 0.69
PSMD11-207ENST00000578397 SPINK5Q9NQ38 1064 aaPredicted RBP19.37■□□□□ 0.69
PSMD11-207ENST00000578397 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
PSMD11-207ENST00000578397 SBF2Q86WG5 1849 aa19.36■□□□□ 0.69
PSMD11-207ENST00000578397 NUP188Q5SRE5 1749 aa19.35■□□□□ 0.69
PSMD11-207ENST00000578397 RRS1Q15050 365 aaKnown RBP19.35■□□□□ 0.69
PSMD11-207ENST00000578397 RGPD3A6NKT7 1758 aaPredicted RBP19.34■□□□□ 0.69
PSMD11-207ENST00000578397 RGPD4Q7Z3J3 1758 aa19.34■□□□□ 0.69
PSMD11-207ENST00000578397 KCNQ2O43526 872 aa19.34■□□□□ 0.69
PSMD11-207ENST00000578397 PROM2Q8N271 834 aa19.34■□□□□ 0.69
PSMD11-207ENST00000578397 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.68
PSMD11-207ENST00000578397 KIF24Q5T7B8 1368 aa19.32■□□□□ 0.68
PSMD11-207ENST00000578397 TXNRD1Q16881 649 aa19.32■□□□□ 0.68
PSMD11-207ENST00000578397 ACSBG1Q96GR2 724 aa19.32■□□□□ 0.68
PSMD11-207ENST00000578397 NSD3Q9BZ95 1437 aa19.32■□□□□ 0.68
PSMD11-207ENST00000578397 FAM208AQ9UK61 1670 aaKnown RBP19.31■□□□□ 0.68
PSMD11-207ENST00000578397 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms