RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
SMARCD2-207ENST00000578234 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.45
SMARCD2-207ENST00000578234 RREB1Q92766 1687 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 DDB1Q16531 1140 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 CDCA7Q9BWT1 371 aaPredicted RBP17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 PPP1R1BQ9UD71 204 aaPredicted RBP17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 OVOS2A0A0G2JMS6 1433 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 OVOS2A0A0J9YW53 1432 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 OVOS2Q6IE36 1432 aa17.88■□□□□ 0.45
SMARCD2-207ENST00000578234 CARD11Q9BXL7 1154 aa17.87■□□□□ 0.45
SMARCD2-207ENST00000578234 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
SMARCD2-207ENST00000578234 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
SMARCD2-207ENST00000578234 LRRC37A3O60309 1634 aa17.85■□□□□ 0.45
SMARCD2-207ENST00000578234 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
SMARCD2-207ENST00000578234 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
SMARCD2-207ENST00000578234 PLSCR1O15162 318 aa17.84■□□□□ 0.45
SMARCD2-207ENST00000578234 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
SMARCD2-207ENST00000578234 NFAT5O94916 1531 aa17.83■□□□□ 0.45
SMARCD2-207ENST00000578234 USP31Q70CQ4 1352 aa17.83■□□□□ 0.45
SMARCD2-207ENST00000578234 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
SMARCD2-207ENST00000578234 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
SMARCD2-207ENST00000578234 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.44
SMARCD2-207ENST00000578234 BCL9O00512 1426 aa17.82■□□□□ 0.44
SMARCD2-207ENST00000578234 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
SMARCD2-207ENST00000578234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCD2-207ENST00000578234 MARCH10Q8NA82 808 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-207ENST00000578234 ABCC6O95255 1503 aa17.82■□□□□ 0.44
SMARCD2-207ENST00000578234 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
SMARCD2-207ENST00000578234 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
SMARCD2-207ENST00000578234 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
SMARCD2-207ENST00000578234 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
SMARCD2-207ENST00000578234 EXOC5O00471 708 aa17.8■□□□□ 0.44
SMARCD2-207ENST00000578234 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
SMARCD2-207ENST00000578234 CD163L1Q9NR16 1453 aa17.8■□□□□ 0.44
SMARCD2-207ENST00000578234 RGPD3A6NKT7 1758 aaPredicted RBP17.79■□□□□ 0.44
SMARCD2-207ENST00000578234 RGPD4Q7Z3J3 1758 aa17.79■□□□□ 0.44
SMARCD2-207ENST00000578234 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
SMARCD2-207ENST00000578234 SLC12A5Q9H2X9 1139 aa17.79■□□□□ 0.44
SMARCD2-207ENST00000578234 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
SMARCD2-207ENST00000578234 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
SMARCD2-207ENST00000578234 NME9Q86XW9 330 aa17.78■□□□□ 0.44
SMARCD2-207ENST00000578234 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
SMARCD2-207ENST00000578234 TERF2IPQ9NYB0 399 aa17.78■□□□□ 0.44
SMARCD2-207ENST00000578234 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.44
SMARCD2-207ENST00000578234 ERBB3P21860 1342 aa17.75■□□□□ 0.43
SMARCD2-207ENST00000578234 KCNQ2O43526 872 aa17.75■□□□□ 0.43
SMARCD2-207ENST00000578234 PROM2Q8N271 834 aa17.75■□□□□ 0.43
SMARCD2-207ENST00000578234 SLC24A1O60721 1099 aa17.74■□□□□ 0.43
SMARCD2-207ENST00000578234 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
SMARCD2-207ENST00000578234 YY1P25490 414 aa17.73■□□□□ 0.43
SMARCD2-207ENST00000578234 TESK2Q96S53 571 aa17.73■□□□□ 0.43
SMARCD2-207ENST00000578234 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
SMARCD2-207ENST00000578234 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
SMARCD2-207ENST00000578234 LTN1O94822 1766 aa17.72■□□□□ 0.43
SMARCD2-207ENST00000578234 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
SMARCD2-207ENST00000578234 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
SMARCD2-207ENST00000578234 IL2RBP14784 551 aa17.71■□□□□ 0.43
SMARCD2-207ENST00000578234 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
SMARCD2-207ENST00000578234 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 STK32BQ9NY57 414 aa17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
SMARCD2-207ENST00000578234 IP6K1Q92551 441 aa17.68■□□□□ 0.42
SMARCD2-207ENST00000578234 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
SMARCD2-207ENST00000578234 SLC15A2Q16348 729 aa17.66■□□□□ 0.42
SMARCD2-207ENST00000578234 PDGFDQ9GZP0 370 aaPredicted RBP17.66■□□□□ 0.42
SMARCD2-207ENST00000578234 NHSQ6T4R5 1651 aa17.66■□□□□ 0.42
SMARCD2-207ENST00000578234 CASZ1Q86V15 1759 aa17.66■□□□□ 0.42
SMARCD2-207ENST00000578234 COG3Q96JB2 828 aa17.65■□□□□ 0.42
SMARCD2-207ENST00000578234 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
SMARCD2-207ENST00000578234 FAM208AQ9UK61 1670 aaKnown RBP17.62■□□□□ 0.41
SMARCD2-207ENST00000578234 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
SMARCD2-207ENST00000578234 HOXC9P31274 260 aa17.61■□□□□ 0.41
SMARCD2-207ENST00000578234 PTGER2P43116 358 aa17.61■□□□□ 0.41
SMARCD2-207ENST00000578234 DDX54Q8TDD1 881 aaKnown RBP17.61■□□□□ 0.41
SMARCD2-207ENST00000578234 AMPHP49418 695 aa17.6■□□□□ 0.41
SMARCD2-207ENST00000578234 TMF1P82094 1093 aa17.6■□□□□ 0.41
SMARCD2-207ENST00000578234 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
SMARCD2-207ENST00000578234 BTAF1O14981 1849 aa17.6■□□□□ 0.41
SMARCD2-207ENST00000578234 FBLN1P23142 703 aa17.59■□□□□ 0.41
SMARCD2-207ENST00000578234 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-207ENST00000578234 USP47Q96K76 1375 aa17.58■□□□□ 0.4
SMARCD2-207ENST00000578234 FYB1O15117 783 aa17.58■□□□□ 0.4
SMARCD2-207ENST00000578234 MTFR1LQ9H019 292 aa17.58■□□□□ 0.4
SMARCD2-207ENST00000578234 RTL1A6NKG5 1358 aa17.56■□□□□ 0.4
SMARCD2-207ENST00000578234 CDCA8Q53HL2 280 aa17.56■□□□□ 0.4
SMARCD2-207ENST00000578234 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
SMARCD2-207ENST00000578234 PAPPAQ13219 1627 aa17.56■□□□□ 0.4
SMARCD2-207ENST00000578234 SLC27A3Q5K4L6 730 aa17.55■□□□□ 0.4
SMARCD2-207ENST00000578234 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
SMARCD2-207ENST00000578234 SGIP1Q9BQI5 828 aa17.55■□□□□ 0.4
SMARCD2-207ENST00000578234 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
SMARCD2-207ENST00000578234 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
SMARCD2-207ENST00000578234 MYOM1P52179 1685 aa17.54■□□□□ 0.4
SMARCD2-207ENST00000578234 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
SMARCD2-207ENST00000578234 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms