RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ALDH1A1P00352 501 aa4.85□□□□□ -1.63
COPS3-213ENST00000577210 SH3BP2P78314 561 aa4.85□□□□□ -1.63
COPS3-213ENST00000577210 SUPT5HO00267 1087 aaKnown RBP4.84□□□□□ -1.63
COPS3-213ENST00000577210 SIAH2O43255 324 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 SNRPBP14678 240 aaKnown RBP4.84□□□□□ -1.63
COPS3-213ENST00000577210 VARSP26640 1264 aaKnown RBP4.84□□□□□ -1.63
COPS3-213ENST00000577210 IRF5Q13568 498 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 NBPF20Q3BBV1 942 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 RNF20Q5VTR2 975 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 ZNF511Q8NB15 262 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 EHBP1Q8NDI1 1231 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 EPS8L1Q8TE68 723 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 ZNF777Q9ULD5 760 aaPredicted RBP4.84□□□□□ -1.63
COPS3-213ENST00000577210 TLL2Q9Y6L7 1015 aa4.84□□□□□ -1.63
COPS3-213ENST00000577210 LZTS3O60299 673 aaPredicted RBP4.83□□□□□ -1.64
COPS3-213ENST00000577210 BMP1P13497 986 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 PDE4CQ08493 712 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 SH3BP5LQ7L8J4 393 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 NFATC2IPQ8NCF5 419 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 GLMNQ92990 594 aa4.83□□□□□ -1.64
COPS3-213ENST00000577210 FBXO45P0C2W1 286 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 VAC14Q08AM6 782 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 HDGFL1Q5TGJ6 251 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 DZIP3Q86Y13 1208 aaKnown RBP4.82□□□□□ -1.64
COPS3-213ENST00000577210 SEPT12Q8IYM1 358 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 BAP1Q92560 729 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 SLC10A4Q96EP9 437 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 TRIM47Q96LD4 638 aa4.82□□□□□ -1.64
COPS3-213ENST00000577210 PPP1R15AO75807 674 aaPredicted RBP4.81□□□□□ -1.64
COPS3-213ENST00000577210 NFX1Q12986 1120 aaKnown RBP4.81□□□□□ -1.64
COPS3-213ENST00000577210 MAP7D1Q3KQU3 841 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 SLFNL1Q499Z3 407 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 SH3RF1Q7Z6J0 888 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 TRMT44Q8IYL2 757 aaKnown RBP4.81□□□□□ -1.64
COPS3-213ENST00000577210 MPNDQ8N594 471 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 SIRT1Q96EB6 747 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 ARXQ96QS3 562 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 ALG2Q9H553 416 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 PCDHB9Q9Y5E1 797 aa4.81□□□□□ -1.64
COPS3-213ENST00000577210 WFS1O76024 890 aa4.8□□□□□ -1.64
COPS3-213ENST00000577210 INSM1Q01101 510 aaPredicted RBP4.8□□□□□ -1.64
COPS3-213ENST00000577210 TRIM46Q7Z4K8 759 aa4.8□□□□□ -1.64
COPS3-213ENST00000577210 ADAM32Q8TC27 787 aa4.8□□□□□ -1.64
COPS3-213ENST00000577210 MAP4K5Q9Y4K4 846 aa4.8□□□□□ -1.64
COPS3-213ENST00000577210 ACIN1Q9UKV3 1341 aaKnown RBP4.79□□□□□ -1.64
COPS3-213ENST00000577210 MAGEB6P1A0A0J9YX57 407 aa4.79□□□□□ -1.64
COPS3-213ENST00000577210 GPR37L1O60883 481 aa4.79□□□□□ -1.64
COPS3-213ENST00000577210 DHX9Q08211 1270 aaKnown RBP4.79□□□□□ -1.64
COPS3-213ENST00000577210 CCDC82Q8N4S0 544 aa4.79□□□□□ -1.64
COPS3-213ENST00000577210 C1QTNF2Q9BXJ5 285 aa4.79□□□□□ -1.64
COPS3-213ENST00000577210 ESF1Q9H501 851 aaKnown RBP4.79□□□□□ -1.64
COPS3-213ENST00000577210 WASF2Q9Y6W5 498 aa4.79□□□□□ -1.64
COPS3-213ENST00000577210 ARID3CA6NKF2 412 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 CAPN5O15484 640 aaPredicted RBP4.78□□□□□ -1.64
COPS3-213ENST00000577210 ERFEQ4G0M1 354 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 RNF135Q8IUD6 432 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 FOXJ1Q92949 421 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 CARD14Q9BXL6 1004 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 SENP2Q9HC62 589 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 CEP126Q9P2H0 1117 aa4.78□□□□□ -1.64
COPS3-213ENST00000577210 POM121CA8CG34 1229 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 ATP9BO43861 1147 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 NNTQ13423 1086 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 C4orf48Q5BLP8 95 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 VASH1Q7L8A9 365 aaPredicted RBP4.77□□□□□ -1.65
COPS3-213ENST00000577210 HOMEZQ8IX15 550 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 PPP1R12CQ9BZL4 782 aa4.77□□□□□ -1.65
COPS3-213ENST00000577210 TERTO14746 1132 aaKnown RBP4.76□□□□□ -1.65
COPS3-213ENST00000577210 WIPF1O43516 503 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 NR5A1Q13285 461 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 SUZ12Q15022 739 aaKnown RBP4.76□□□□□ -1.65
COPS3-213ENST00000577210 TRIM50Q86XT4 487 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 PLEKHM2Q8IWE5 1019 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 KIFC2Q96AC6 838 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 CDK15Q96Q40 435 aa4.76□□□□□ -1.65
COPS3-213ENST00000577210 TIMP2P16035 220 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 ATP1A2P50993 1020 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 USP4Q13107 963 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 EML3Q32P44 896 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 PBXIP1Q96AQ6 731 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 KCTD15Q96SI1 283 aaPredicted RBP4.75□□□□□ -1.65
COPS3-213ENST00000577210 ARID3AQ99856 593 aa4.75□□□□□ -1.65
COPS3-213ENST00000577210 RBM19Q9Y4C8 960 aaKnown RBP4.75□□□□□ -1.65
COPS3-213ENST00000577210 PALM3A6NDB9 673 aaPredicted RBP4.74□□□□□ -1.65
COPS3-213ENST00000577210 ESPNB1AK53 854 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 ATP5J2-PTCD1G3V325 749 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 ADH1CP00326 375 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 MYCP01106 439 aaPredicted RBP4.74□□□□□ -1.65
COPS3-213ENST00000577210 NR3C2P08235 984 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 SKIP12755 728 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 VEGFBP49765 207 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 WDR4P57081 412 aaKnown RBP4.74□□□□□ -1.65
COPS3-213ENST00000577210 ARID5BQ14865 1188 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 ADAMTS19Q8TE59 1207 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 ZFP42Q96MM3 310 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 OCSTAMPQ9BR26 566 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 KLF16Q9BXK1 252 aaPredicted RBP4.74□□□□□ -1.65
COPS3-213ENST00000577210 C1orf115Q9H7X2 142 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms