RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-233	ENST00000575934	USP31	Q70CQ4	1352 aa		28.94	■■■□□ 2.22
ABR-233	ENST00000575934	WDR17	Q8IZU2	1322 aa		28.94	■■■□□ 2.22
ABR-233	ENST00000575934	LTN1	O94822	1766 aa		28.93	■■■□□ 2.22
ABR-233	ENST00000575934	SBF2	Q86WG5	1849 aa		28.93	■■■□□ 2.22
ABR-233	ENST00000575934	PUS7	Q96PZ0	661 aa	Known RBP	28.93	■■■□□ 2.22
ABR-233	ENST00000575934	RREB1	Q92766	1687 aa		28.93	■■■□□ 2.22
ABR-233	ENST00000575934	LRP5	O75197	1615 aa		28.92	■■■□□ 2.22
ABR-233	ENST00000575934	SOX12	O15370	315 aa		28.91	■■■□□ 2.22
ABR-233	ENST00000575934	TOM1L2	Q6ZVM7	507 aa		28.91	■■■□□ 2.22
ABR-233	ENST00000575934	TMC1	Q8TDI8	760 aa		28.91	■■■□□ 2.22
ABR-233	ENST00000575934	EDC4	Q6P2E9	1401 aa	Known RBP	28.9	■■■□□ 2.22
ABR-233	ENST00000575934	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
ABR-233	ENST00000575934	TESK2	Q96S53	571 aa		28.9	■■■□□ 2.22
ABR-233	ENST00000575934	SLC12A5	Q9H2X9	1139 aa		28.9	■■■□□ 2.22
ABR-233	ENST00000575934	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.89	■■■□□ 2.22
ABR-233	ENST00000575934		A0A1W2PP64	1363 aa		28.88	■■■□□ 2.21
ABR-233	ENST00000575934	EZH2	Q15910	746 aa	Known RBP	28.88	■■■□□ 2.21
ABR-233	ENST00000575934	CAMKK2	Q96RR4	588 aa		28.88	■■■□□ 2.21
ABR-233	ENST00000575934	PARD3	Q8TEW0	1356 aa		28.88	■■■□□ 2.21
ABR-233	ENST00000575934	NME9	Q86XW9	330 aa		28.87	■■■□□ 2.21
ABR-233	ENST00000575934	OVOS2	A0A0G2JMS6	1433 aa		28.86	■■■□□ 2.21
ABR-233	ENST00000575934	OVOS2	A0A0J9YW53	1432 aa		28.86	■■■□□ 2.21
ABR-233	ENST00000575934	OVOS2	Q6IE36	1432 aa		28.86	■■■□□ 2.21
ABR-233	ENST00000575934	NUP188	Q5SRE5	1749 aa		28.86	■■■□□ 2.21
ABR-233	ENST00000575934	ST20-MTHFS	A0A0A6YYL1	179 aa		28.86	■■■□□ 2.21
ABR-233	ENST00000575934	PSD	A5PKW4	1024 aa	Predicted RBP	28.86	■■■□□ 2.21
ABR-233	ENST00000575934	APBA3	O96018	575 aa		28.85	■■■□□ 2.21
ABR-233	ENST00000575934	TERF2IP	Q9NYB0	399 aa		28.85	■■■□□ 2.21
ABR-233	ENST00000575934	NINL	Q9Y2I6	1382 aa		28.85	■■■□□ 2.21
ABR-233	ENST00000575934	C11orf95	C9JLR9	678 aa	Predicted RBP	28.84	■■■□□ 2.21
ABR-233	ENST00000575934	DDB1	Q16531	1140 aa		28.83	■■■□□ 2.21
ABR-233	ENST00000575934	CARD10	Q9BWT7	1032 aa		28.83	■■■□□ 2.21
ABR-233	ENST00000575934	RGPD3	A6NKT7	1758 aa	Predicted RBP	28.83	■■■□□ 2.21
ABR-233	ENST00000575934	RGPD4	Q7Z3J3	1758 aa		28.83	■■■□□ 2.21
ABR-233	ENST00000575934	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.82	■■■□□ 2.2
ABR-233	ENST00000575934	CSB-PGBD3	P0DP91	1061 aa		28.81	■■■□□ 2.2
ABR-233	ENST00000575934	SLC24A1	O60721	1099 aa		28.8	■■■□□ 2.2
ABR-233	ENST00000575934	CCDC7	Q96M83	1385 aa		28.79	■■■□□ 2.2
ABR-233	ENST00000575934	R3HDM1	Q15032	1099 aa	Known RBP	28.77	■■■□□ 2.2
ABR-233	ENST00000575934	BCL9	O00512	1426 aa		28.77	■■■□□ 2.2
ABR-233	ENST00000575934	USP47	Q96K76	1375 aa		28.76	■■■□□ 2.2
ABR-233	ENST00000575934	ERBB3	P21860	1342 aa		28.76	■■■□□ 2.19
ABR-233	ENST00000575934	MARCH10	Q8NA82	808 aa	Predicted RBP	28.73	■■■□□ 2.19
ABR-233	ENST00000575934	TNS2	Q63HR2	1409 aa		28.72	■■■□□ 2.19
ABR-233	ENST00000575934	FAM208A	Q9UK61	1670 aa	Known RBP	28.72	■■■□□ 2.19
ABR-233	ENST00000575934	ANKRD36B	Q8N2N9	1353 aa		28.72	■■■□□ 2.19
ABR-233	ENST00000575934	TMF1	P82094	1093 aa		28.69	■■■□□ 2.18
ABR-233	ENST00000575934	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.68	■■■□□ 2.18
ABR-233	ENST00000575934	CLSPN	Q9HAW4	1339 aa		28.68	■■■□□ 2.18
ABR-233	ENST00000575934	EXOC5	O00471	708 aa		28.67	■■■□□ 2.18
ABR-233	ENST00000575934	PLSCR1	O15162	318 aa		28.67	■■■□□ 2.18
ABR-233	ENST00000575934	TIMELESS	Q9UNS1	1208 aa		28.67	■■■□□ 2.18
ABR-233	ENST00000575934	ANKRD24	Q8TF21	1146 aa		28.66	■■■□□ 2.18
ABR-233	ENST00000575934	NLRP2	Q9NX02	1062 aa		28.66	■■■□□ 2.18
ABR-233	ENST00000575934	NHS	Q6T4R5	1651 aa		28.65	■■■□□ 2.18
ABR-233	ENST00000575934	PTF1A	Q7RTS3	328 aa		28.65	■■■□□ 2.18
ABR-233	ENST00000575934	KIF20B	Q96Q89	1820 aa		28.64	■■■□□ 2.18
ABR-233	ENST00000575934	NBPF14	Q5TI25	921 aa		28.64	■■■□□ 2.18
ABR-233	ENST00000575934	IP6K1	Q92551	441 aa		28.64	■■■□□ 2.18
ABR-233	ENST00000575934	COG3	Q96JB2	828 aa		28.64	■■■□□ 2.18
ABR-233	ENST00000575934	MYOM1	P52179	1685 aa		28.64	■■■□□ 2.17
ABR-233	ENST00000575934	KAT6B	Q8WYB5	2073 aa		28.63	■■■□□ 2.17
ABR-233	ENST00000575934	RGPD2	P0DJD1	1756 aa		28.62	■■■□□ 2.17
ABR-233	ENST00000575934	IL2RB	P14784	551 aa		28.61	■■■□□ 2.17
ABR-233	ENST00000575934	MAP3K19	Q56UN5	1328 aa		28.6	■■■□□ 2.17
ABR-233	ENST00000575934	CDCA8	Q53HL2	280 aa		28.59	■■■□□ 2.17
ABR-233	ENST00000575934	PCGF6	Q9BYE7	350 aa		28.57	■■■□□ 2.16
ABR-233	ENST00000575934	HOXC9	P31274	260 aa		28.56	■■■□□ 2.16
ABR-233	ENST00000575934	BTAF1	O14981	1849 aa		28.55	■■■□□ 2.16
ABR-233	ENST00000575934	FYB1	O15117	783 aa		28.55	■■■□□ 2.16
ABR-233	ENST00000575934	FBLN1	P23142	703 aa		28.55	■■■□□ 2.16
ABR-233	ENST00000575934	CASZ1	Q86V15	1759 aa		28.55	■■■□□ 2.16
ABR-233	ENST00000575934	RTL1	A6NKG5	1358 aa		28.54	■■■□□ 2.16
ABR-233	ENST00000575934	PROM2	Q8N271	834 aa		28.54	■■■□□ 2.16
ABR-233	ENST00000575934	LTV1	Q96GA3	475 aa	Predicted RBP	28.53	■■■□□ 2.16
ABR-233	ENST00000575934	SHANK3	Q9BYB0	1731 aa		28.52	■■■□□ 2.16
ABR-233	ENST00000575934	AMPH	P49418	695 aa		28.52	■■■□□ 2.16
ABR-233	ENST00000575934	GGNBP2	Q9H3C7	697 aa		28.52	■■■□□ 2.16
ABR-233	ENST00000575934	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.52	■■■□□ 2.16
ABR-233	ENST00000575934	KCNQ2	O43526	872 aa		28.51	■■■□□ 2.15
ABR-233	ENST00000575934	TXNRD1	Q16881	649 aa		28.48	■■■□□ 2.15
ABR-233	ENST00000575934	ACSBG1	Q96GR2	724 aa		28.48	■■■□□ 2.15
ABR-233	ENST00000575934	RRS1	Q15050	365 aa	Known RBP	28.47	■■■□□ 2.15
ABR-233	ENST00000575934	CARD14	Q9BXL6	1004 aa		28.45	■■■□□ 2.14
ABR-233	ENST00000575934	NSD3	Q9BZ95	1437 aa		28.44	■■■□□ 2.14
ABR-233	ENST00000575934	PAPPA	Q13219	1627 aa		28.44	■■■□□ 2.14
ABR-233	ENST00000575934	DOT1L	Q8TEK3	1739 aa		28.44	■■■□□ 2.14
ABR-233	ENST00000575934	MEGF6	O75095	1541 aa		28.43	■■■□□ 2.14
ABR-233	ENST00000575934	SPON1	Q9HCB6	807 aa		28.43	■■■□□ 2.14
ABR-233	ENST00000575934	ANKRD26	Q9UPS8	1709 aa		28.43	■■■□□ 2.14
ABR-233	ENST00000575934	KIF24	Q5T7B8	1368 aa		28.42	■■■□□ 2.14
ABR-233	ENST00000575934	SMG6	Q86US8	1419 aa	Known RBP	28.41	■■■□□ 2.14
ABR-233	ENST00000575934	MAP2	P11137	1827 aa	Known RBP	28.41	■■■□□ 2.14
ABR-233	ENST00000575934	FLT4	P35916	1363 aa		28.4	■■■□□ 2.14
ABR-233	ENST00000575934	DDX54	Q8TDD1	881 aa	Known RBP	28.4	■■■□□ 2.14
ABR-233	ENST00000575934	INSR	P06213	1382 aa		28.39	■■■□□ 2.14
ABR-233	ENST00000575934	NBPF6	Q5VWK0	638 aa		28.39	■■■□□ 2.14
ABR-233	ENST00000575934	NBPF4	Q96M43	638 aa		28.39	■■■□□ 2.14
ABR-233	ENST00000575934	STK32B	Q9NY57	414 aa		28.38	■■■□□ 2.13
ABR-233	ENST00000575934	SLC15A2	Q16348	729 aa		28.37	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms