RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 USP31Q70CQ4 1352 aa16.12■□□□□ 0.17
LITAF-206ENST00000571277 ABCC6O95255 1503 aa16.11■□□□□ 0.17
LITAF-206ENST00000571277 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
LITAF-206ENST00000571277 TESK2Q96S53 571 aa16.11■□□□□ 0.17
LITAF-206ENST00000571277 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
LITAF-206ENST00000571277 LRP5O75197 1615 aa16.11■□□□□ 0.17
LITAF-206ENST00000571277 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
LITAF-206ENST00000571277 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
LITAF-206ENST00000571277 RREB1Q92766 1687 aa16.1■□□□□ 0.17
LITAF-206ENST00000571277 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
LITAF-206ENST00000571277 SOX12O15370 315 aa16.09■□□□□ 0.17
LITAF-206ENST00000571277 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
LITAF-206ENST00000571277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.09■□□□□ 0.17
LITAF-206ENST00000571277 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
LITAF-206ENST00000571277 EDC4Q6P2E9 1401 aaKnown RBP16.09■□□□□ 0.17
LITAF-206ENST00000571277 NME9Q86XW9 330 aa16.08■□□□□ 0.16
LITAF-206ENST00000571277 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
LITAF-206ENST00000571277 SBF2Q86WG5 1849 aa16.08■□□□□ 0.16
LITAF-206ENST00000571277 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
LITAF-206ENST00000571277 APBA3O96018 575 aa16.07■□□□□ 0.16
LITAF-206ENST00000571277 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
LITAF-206ENST00000571277 NUP188Q5SRE5 1749 aa16.07■□□□□ 0.16
LITAF-206ENST00000571277 LTN1O94822 1766 aa16.07■□□□□ 0.16
LITAF-206ENST00000571277 OVOS2A0A0G2JMS6 1433 aa16.06■□□□□ 0.16
LITAF-206ENST00000571277 OVOS2A0A0J9YW53 1432 aa16.06■□□□□ 0.16
LITAF-206ENST00000571277 OVOS2Q6IE36 1432 aa16.06■□□□□ 0.16
LITAF-206ENST00000571277 CARD10Q9BWT7 1032 aa16.06■□□□□ 0.16
LITAF-206ENST00000571277 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
LITAF-206ENST00000571277 TERF2IPQ9NYB0 399 aa16.05■□□□□ 0.16
LITAF-206ENST00000571277 NINLQ9Y2I6 1382 aa16.04■□□□□ 0.16
LITAF-206ENST00000571277 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
LITAF-206ENST00000571277 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
LITAF-206ENST00000571277 DDB1Q16531 1140 aa16.04■□□□□ 0.16
LITAF-206ENST00000571277 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
LITAF-206ENST00000571277 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
LITAF-206ENST00000571277 MARCH10Q8NA82 808 aaPredicted RBP16.03■□□□□ 0.16
LITAF-206ENST00000571277 CDCA7Q9BWT1 371 aaPredicted RBP16.03■□□□□ 0.16
LITAF-206ENST00000571277 BCL9O00512 1426 aa16.02■□□□□ 0.16
LITAF-206ENST00000571277 ERBB3P21860 1342 aa16.02■□□□□ 0.16
LITAF-206ENST00000571277 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
LITAF-206ENST00000571277 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
LITAF-206ENST00000571277 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
LITAF-206ENST00000571277 USP47Q96K76 1375 aa16■□□□□ 0.15
LITAF-206ENST00000571277 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
LITAF-206ENST00000571277 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
LITAF-206ENST00000571277 PLSCR1O15162 318 aa15.98■□□□□ 0.15
LITAF-206ENST00000571277 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
LITAF-206ENST00000571277 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
LITAF-206ENST00000571277 EXOC5O00471 708 aa15.96■□□□□ 0.15
LITAF-206ENST00000571277 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
LITAF-206ENST00000571277 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
LITAF-206ENST00000571277 IP6K1Q92551 441 aa15.95■□□□□ 0.14
LITAF-206ENST00000571277 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
LITAF-206ENST00000571277 TMF1P82094 1093 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 PROM2Q8N271 834 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 MYOM1P52179 1685 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
LITAF-206ENST00000571277 FBLN1P23142 703 aa15.93■□□□□ 0.14
LITAF-206ENST00000571277 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
LITAF-206ENST00000571277 COG3Q96JB2 828 aa15.93■□□□□ 0.14
LITAF-206ENST00000571277 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
LITAF-206ENST00000571277 FYB1O15117 783 aa15.92■□□□□ 0.14
LITAF-206ENST00000571277 IL2RBP14784 551 aa15.92■□□□□ 0.14
LITAF-206ENST00000571277 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
LITAF-206ENST00000571277 KCNQ2O43526 872 aa15.91■□□□□ 0.14
LITAF-206ENST00000571277 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
LITAF-206ENST00000571277 HOXC9P31274 260 aa15.9■□□□□ 0.14
LITAF-206ENST00000571277 CASZ1Q86V15 1759 aa15.9■□□□□ 0.14
LITAF-206ENST00000571277 KIF20BQ96Q89 1820 aa15.89■□□□□ 0.13
LITAF-206ENST00000571277 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
LITAF-206ENST00000571277 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
LITAF-206ENST00000571277 BTAF1O14981 1849 aa15.88■□□□□ 0.13
LITAF-206ENST00000571277 SHANK3Q9BYB0 1731 aa15.88■□□□□ 0.13
LITAF-206ENST00000571277 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
LITAF-206ENST00000571277 TXNRD1Q16881 649 aa15.87■□□□□ 0.13
LITAF-206ENST00000571277 CDCA8Q53HL2 280 aa15.87■□□□□ 0.13
LITAF-206ENST00000571277 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
LITAF-206ENST00000571277 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
LITAF-206ENST00000571277 AMPHP49418 695 aa15.86■□□□□ 0.13
LITAF-206ENST00000571277 RRS1Q15050 365 aaKnown RBP15.86■□□□□ 0.13
LITAF-206ENST00000571277 ACSBG1Q96GR2 724 aa15.86■□□□□ 0.13
LITAF-206ENST00000571277 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
LITAF-206ENST00000571277 PAPPAQ13219 1627 aa15.85■□□□□ 0.13
LITAF-206ENST00000571277 MEGF6O75095 1541 aa15.84■□□□□ 0.13
LITAF-206ENST00000571277 SPON1Q9HCB6 807 aa15.84■□□□□ 0.13
LITAF-206ENST00000571277 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
LITAF-206ENST00000571277 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
LITAF-206ENST00000571277 NBPF6Q5VWK0 638 aa15.82■□□□□ 0.12
LITAF-206ENST00000571277 DDX54Q8TDD1 881 aaKnown RBP15.82■□□□□ 0.12
LITAF-206ENST00000571277 NBPF4Q96M43 638 aa15.82■□□□□ 0.12
LITAF-206ENST00000571277 DOT1LQ8TEK3 1739 aa15.82■□□□□ 0.12
LITAF-206ENST00000571277 INSRP06213 1382 aa15.81■□□□□ 0.12
LITAF-206ENST00000571277 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
LITAF-206ENST00000571277 ANKRD26Q9UPS8 1709 aa15.81■□□□□ 0.12
LITAF-206ENST00000571277 FLT4P35916 1363 aa15.8■□□□□ 0.12
LITAF-206ENST00000571277 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
LITAF-206ENST00000571277 HSP90AB2PQ58FF8 381 aa15.8■□□□□ 0.12
LITAF-206ENST00000571277 NSD2O96028 1365 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms