RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.91
KARSP3-201ENST00000571212 PDXDC2PQ6P474 469 aa9.39□□□□□ -0.91
KARSP3-201ENST00000571212 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
KARSP3-201ENST00000571212 GPKOWQ92917 476 aaPredicted RBP eCLIP9.39□□□□□ -0.91
KARSP3-201ENST00000571212 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
KARSP3-201ENST00000571212 MRPL14Q6P1L8 145 aaKnown RBP9.38□□□□□ -0.91
KARSP3-201ENST00000571212 PURBQ96QR8 312 aaKnown RBP9.38□□□□□ -0.91
KARSP3-201ENST00000571212 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
KARSP3-201ENST00000571212 WFS1O76024 890 aa9.36□□□□□ -0.91
KARSP3-201ENST00000571212 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
KARSP3-201ENST00000571212 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
KARSP3-201ENST00000571212 LCE2CQ5TA81 110 aa9.36□□□□□ -0.91
KARSP3-201ENST00000571212 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
KARSP3-201ENST00000571212 C6orf118Q5T5N4 469 aa9.35□□□□□ -0.91
KARSP3-201ENST00000571212 TRIM34Q9BYJ4 488 aa9.35□□□□□ -0.91
KARSP3-201ENST00000571212 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
KARSP3-201ENST00000571212 PTK2Q05397 1052 aa9.33□□□□□ -0.92
KARSP3-201ENST00000571212 SCARF1Q14162 830 aa9.33□□□□□ -0.92
KARSP3-201ENST00000571212 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
KARSP3-201ENST00000571212 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
KARSP3-201ENST00000571212 VEGFBP49765 207 aa9.32□□□□□ -0.92
KARSP3-201ENST00000571212 CCDC116Q8IYX3 515 aa9.32□□□□□ -0.92
KARSP3-201ENST00000571212 SLC10A4Q96EP9 437 aa9.32□□□□□ -0.92
KARSP3-201ENST00000571212 KCTD15Q96SI1 283 aaPredicted RBP9.32□□□□□ -0.92
KARSP3-201ENST00000571212 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
KARSP3-201ENST00000571212 PRKCSHP14314 528 aaPredicted RBP9.31□□□□□ -0.92
KARSP3-201ENST00000571212 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
KARSP3-201ENST00000571212 MEIOBQ8N635 442 aa9.31□□□□□ -0.92
KARSP3-201ENST00000571212 CBLBQ13191 982 aa9.3□□□□□ -0.92
KARSP3-201ENST00000571212 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
KARSP3-201ENST00000571212 EMILIN1Q9Y6C2 1016 aa9.3□□□□□ -0.92
KARSP3-201ENST00000571212 BMP2P12643 396 aa9.29□□□□□ -0.92
KARSP3-201ENST00000571212 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
KARSP3-201ENST00000571212 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
KARSP3-201ENST00000571212 RAB15P59190 212 aa9.28□□□□□ -0.92
KARSP3-201ENST00000571212 INTS6LQ5JSJ4 861 aaKnown RBP9.28□□□□□ -0.92
KARSP3-201ENST00000571212 GPSM3Q9Y4H4 160 aa9.28□□□□□ -0.92
KARSP3-201ENST00000571212 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
KARSP3-201ENST00000571212 CUX2O14529 1486 aa9.26□□□□□ -0.93
KARSP3-201ENST00000571212 UPP2O95045 317 aa9.26□□□□□ -0.93
KARSP3-201ENST00000571212 DZIP3Q86Y13 1208 aaKnown RBP9.26□□□□□ -0.93
KARSP3-201ENST00000571212 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
KARSP3-201ENST00000571212 NCAPD3P42695 1498 aa9.25□□□□□ -0.93
KARSP3-201ENST00000571212 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
KARSP3-201ENST00000571212 MAN1A2O60476 641 aa9.24□□□□□ -0.93
KARSP3-201ENST00000571212 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
KARSP3-201ENST00000571212 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
KARSP3-201ENST00000571212 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
KARSP3-201ENST00000571212 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
KARSP3-201ENST00000571212 Q6ZVU0 165 aa9.23□□□□□ -0.93
KARSP3-201ENST00000571212 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
KARSP3-201ENST00000571212 SOS2Q07890 1332 aaPredicted RBP9.23□□□□□ -0.93
KARSP3-201ENST00000571212 FBXO45P0C2W1 286 aa9.22□□□□□ -0.93
KARSP3-201ENST00000571212 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
KARSP3-201ENST00000571212 SLC16A10Q8TF71 515 aa9.22□□□□□ -0.93
KARSP3-201ENST00000571212 H3BM21 787 aa9.21□□□□□ -0.93
KARSP3-201ENST00000571212 ERVH48-1M5A8F1 160 aa9.21□□□□□ -0.93
KARSP3-201ENST00000571212 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.93
KARSP3-201ENST00000571212 NBPF20Q3BBV1 942 aa9.21□□□□□ -0.93
KARSP3-201ENST00000571212 ERBB4Q15303 1308 aa9.21□□□□□ -0.93
KARSP3-201ENST00000571212 ERCC6Q03468 1493 aa9.21□□□□□ -0.94
KARSP3-201ENST00000571212 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
KARSP3-201ENST00000571212 ZBBXA8MT70 800 aa9.21□□□□□ -0.94
KARSP3-201ENST00000571212 GPR37L1O60883 481 aa9.21□□□□□ -0.94
KARSP3-201ENST00000571212 RELBQ01201 579 aa9.21□□□□□ -0.94
KARSP3-201ENST00000571212 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
KARSP3-201ENST00000571212 WIPF1O43516 503 aa9.2□□□□□ -0.94
KARSP3-201ENST00000571212 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
KARSP3-201ENST00000571212 GMPRP36959 345 aa9.2□□□□□ -0.94
KARSP3-201ENST00000571212 BANK1Q8NDB2 785 aa9.2□□□□□ -0.94
KARSP3-201ENST00000571212 PCDHB9Q9Y5E1 797 aa9.2□□□□□ -0.94
KARSP3-201ENST00000571212 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
KARSP3-201ENST00000571212 ESPNB1AK53 854 aa9.19□□□□□ -0.94
KARSP3-201ENST00000571212 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
KARSP3-201ENST00000571212 TTLL8A6PVC2 850 aa9.18□□□□□ -0.94
KARSP3-201ENST00000571212 LILRA1O75019 489 aa9.18□□□□□ -0.94
KARSP3-201ENST00000571212 NPAS3Q8IXF0 933 aa9.18□□□□□ -0.94
KARSP3-201ENST00000571212 ZNF395Q9H8N7 513 aaPredicted RBP9.18□□□□□ -0.94
KARSP3-201ENST00000571212 SMARCA2P51531 1590 aa9.18□□□□□ -0.94
KARSP3-201ENST00000571212 SPINT1O43278 529 aa9.17□□□□□ -0.94
KARSP3-201ENST00000571212 CTSOP43234 321 aaPredicted RBP9.17□□□□□ -0.94
KARSP3-201ENST00000571212 IRF7Q92985 503 aa9.17□□□□□ -0.94
KARSP3-201ENST00000571212 HMGXB3Q12766 1538 aa9.17□□□□□ -0.94
KARSP3-201ENST00000571212 SMARCA4P51532 1647 aa9.16□□□□□ -0.94
KARSP3-201ENST00000571212 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
KARSP3-201ENST00000571212 KDF1Q8NAX2 398 aaPredicted RBP9.15□□□□□ -0.94
KARSP3-201ENST00000571212 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
KARSP3-201ENST00000571212 PPFIA3O75145 1194 aa9.15□□□□□ -0.95
KARSP3-201ENST00000571212 NR1H3Q13133 447 aa9.14□□□□□ -0.95
KARSP3-201ENST00000571212 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
KARSP3-201ENST00000571212 ADH1AP07327 375 aa9.13□□□□□ -0.95
KARSP3-201ENST00000571212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.13□□□□□ -0.95
KARSP3-201ENST00000571212 PTSQ03393 145 aa9.12□□□□□ -0.95
KARSP3-201ENST00000571212 POLMQ9NP87 494 aaPredicted RBP9.12□□□□□ -0.95
KARSP3-201ENST00000571212 TBC1D2BQ9UPU7 963 aa9.12□□□□□ -0.95
KARSP3-201ENST00000571212 INSM1Q01101 510 aaPredicted RBP9.11□□□□□ -0.95
KARSP3-201ENST00000571212 SEPT12Q8IYM1 358 aa9.11□□□□□ -0.95
KARSP3-201ENST00000571212 NESP48681 1621 aa9.11□□□□□ -0.95
KARSP3-201ENST00000571212 PTGIRP43119 386 aa9.1□□□□□ -0.95
KARSP3-201ENST00000571212 BAZ1AQ9NRL2 1556 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms