RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LTN1O94822 1766 aa24.11■■□□□ 1.45
MAP1LC3B-208ENST00000570189 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
MAP1LC3B-208ENST00000570189 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
MAP1LC3B-208ENST00000570189 LRRC37A3O60309 1634 aa24.1■■□□□ 1.45
MAP1LC3B-208ENST00000570189 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
MAP1LC3B-208ENST00000570189 USP47Q96K76 1375 aa24.09■■□□□ 1.45
MAP1LC3B-208ENST00000570189 BAG6P46379 1132 aa24.09■■□□□ 1.45
MAP1LC3B-208ENST00000570189 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
MAP1LC3B-208ENST00000570189 PEAK1Q9H792 1746 aa24.08■■□□□ 1.45
MAP1LC3B-208ENST00000570189 AXIN2Q9Y2T1 843 aa24.08■■□□□ 1.45
MAP1LC3B-208ENST00000570189 OVOS2A0A0J9YW53 1432 aa24.08■■□□□ 1.44
MAP1LC3B-208ENST00000570189 OVOS2Q6IE36 1432 aa24.08■■□□□ 1.44
MAP1LC3B-208ENST00000570189 C11orf95C9JLR9 678 aaPredicted RBP24.07■■□□□ 1.44
MAP1LC3B-208ENST00000570189 TMC1Q8TDI8 760 aa24.07■■□□□ 1.44
MAP1LC3B-208ENST00000570189 FAM182BQ5T319 152 aa24.05■■□□□ 1.44
MAP1LC3B-208ENST00000570189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.05■■□□□ 1.44
MAP1LC3B-208ENST00000570189 SRCAPQ6ZRS2 3230 aa24.04■■□□□ 1.44
MAP1LC3B-208ENST00000570189 PDE3BQ13370 1112 aa24.04■■□□□ 1.44
MAP1LC3B-208ENST00000570189 NME9Q86XW9 330 aa24.04■■□□□ 1.44
MAP1LC3B-208ENST00000570189 SBF2Q86WG5 1849 aa24.04■■□□□ 1.44
MAP1LC3B-208ENST00000570189 CDCA7Q9BWT1 371 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-208ENST00000570189 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
MAP1LC3B-208ENST00000570189 PARD3Q8TEW0 1356 aa24.03■■□□□ 1.44
MAP1LC3B-208ENST00000570189 TOM1L2Q6ZVM7 507 aa24.02■■□□□ 1.44
MAP1LC3B-208ENST00000570189 RREB1Q92766 1687 aa24.02■■□□□ 1.44
MAP1LC3B-208ENST00000570189 RGPD3A6NKT7 1758 aaPredicted RBP24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 RGPD4Q7Z3J3 1758 aa24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 ZBTB7CA1YPR0 619 aa24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 TMF1P82094 1093 aa24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 CARD10Q9BWT7 1032 aa24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 BCL9O00512 1426 aa24.01■■□□□ 1.43
MAP1LC3B-208ENST00000570189 CCDC7Q96M83 1385 aa24■■□□□ 1.43
MAP1LC3B-208ENST00000570189 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
MAP1LC3B-208ENST00000570189 FAM208AQ9UK61 1670 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3B-208ENST00000570189 CDCA8Q53HL2 280 aa23.98■■□□□ 1.43
MAP1LC3B-208ENST00000570189 ERBB3P21860 1342 aa23.98■■□□□ 1.43
MAP1LC3B-208ENST00000570189 MYOM1P52179 1685 aa23.98■■□□□ 1.43
MAP1LC3B-208ENST00000570189 LRP5O75197 1615 aa23.97■■□□□ 1.43
MAP1LC3B-208ENST00000570189 SOX12O15370 315 aa23.96■■□□□ 1.43
MAP1LC3B-208ENST00000570189 TRIM37O94972 964 aa23.96■■□□□ 1.43
MAP1LC3B-208ENST00000570189 EN1Q05925 392 aaPredicted RBP23.96■■□□□ 1.43
MAP1LC3B-208ENST00000570189 CAMKK2Q96RR4 588 aa23.96■■□□□ 1.43
MAP1LC3B-208ENST00000570189 DDB1Q16531 1140 aa23.95■■□□□ 1.42
MAP1LC3B-208ENST00000570189 NUP188Q5SRE5 1749 aa23.94■■□□□ 1.42
MAP1LC3B-208ENST00000570189 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
MAP1LC3B-208ENST00000570189 KIF20BQ96Q89 1820 aa23.93■■□□□ 1.42
MAP1LC3B-208ENST00000570189 CSB-PGBD3P0DP91 1061 aa23.92■■□□□ 1.42
MAP1LC3B-208ENST00000570189 TNS2Q63HR2 1409 aa23.91■■□□□ 1.42
MAP1LC3B-208ENST00000570189 APBA3O96018 575 aa23.9■■□□□ 1.42
MAP1LC3B-208ENST00000570189 EZH2Q15910 746 aaKnown RBP23.9■■□□□ 1.42
MAP1LC3B-208ENST00000570189 COG3Q96JB2 828 aa23.9■■□□□ 1.42
MAP1LC3B-208ENST00000570189 IP6K1Q92551 441 aa23.89■■□□□ 1.41
MAP1LC3B-208ENST00000570189 MARCH10Q8NA82 808 aaPredicted RBP23.87■■□□□ 1.41
MAP1LC3B-208ENST00000570189 RTL1A6NKG5 1358 aa23.87■■□□□ 1.41
MAP1LC3B-208ENST00000570189 ANKRD24Q8TF21 1146 aa23.86■■□□□ 1.41
MAP1LC3B-208ENST00000570189 FYB1O15117 783 aa23.85■■□□□ 1.41
MAP1LC3B-208ENST00000570189 NHSQ6T4R5 1651 aa23.84■■□□□ 1.41
MAP1LC3B-208ENST00000570189 EXOC5O00471 708 aa23.84■■□□□ 1.41
MAP1LC3B-208ENST00000570189 PLSCR1O15162 318 aa23.84■■□□□ 1.41
MAP1LC3B-208ENST00000570189 BCL11BQ9C0K0 894 aaPredicted RBP23.84■■□□□ 1.41
MAP1LC3B-208ENST00000570189 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
MAP1LC3B-208ENST00000570189 NLRP2Q9NX02 1062 aa23.83■■□□□ 1.41
MAP1LC3B-208ENST00000570189 IL2RBP14784 551 aa23.82■■□□□ 1.4
MAP1LC3B-208ENST00000570189 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
MAP1LC3B-208ENST00000570189 RGPD2P0DJD1 1756 aa23.8■■□□□ 1.4
MAP1LC3B-208ENST00000570189 HOXC9P31274 260 aa23.8■■□□□ 1.4
MAP1LC3B-208ENST00000570189 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
MAP1LC3B-208ENST00000570189 PSDA5PKW4 1024 aaPredicted RBP23.79■■□□□ 1.4
MAP1LC3B-208ENST00000570189 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
MAP1LC3B-208ENST00000570189 R3HDM1Q15032 1099 aaKnown RBP23.77■■□□□ 1.4
MAP1LC3B-208ENST00000570189 CARD14Q9BXL6 1004 aa23.77■■□□□ 1.4
MAP1LC3B-208ENST00000570189 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
MAP1LC3B-208ENST00000570189 AMPHP49418 695 aa23.76■■□□□ 1.39
MAP1LC3B-208ENST00000570189 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
MAP1LC3B-208ENST00000570189 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
MAP1LC3B-208ENST00000570189 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
MAP1LC3B-208ENST00000570189 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
MAP1LC3B-208ENST00000570189 PTF1AQ7RTS3 328 aa23.73■■□□□ 1.39
MAP1LC3B-208ENST00000570189 INSRP06213 1382 aa23.73■■□□□ 1.39
MAP1LC3B-208ENST00000570189 BTAF1O14981 1849 aa23.73■■□□□ 1.39
MAP1LC3B-208ENST00000570189 FBLN1P23142 703 aa23.72■■□□□ 1.39
MAP1LC3B-208ENST00000570189 FLT4P35916 1363 aa23.72■■□□□ 1.39
MAP1LC3B-208ENST00000570189 MAP2P11137 1827 aaKnown RBP23.71■■□□□ 1.39
MAP1LC3B-208ENST00000570189 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
MAP1LC3B-208ENST00000570189 RRS1Q15050 365 aaKnown RBP23.71■■□□□ 1.39
MAP1LC3B-208ENST00000570189 CGNL1Q0VF96 1302 aa23.69■■□□□ 1.38
MAP1LC3B-208ENST00000570189 HSPA5P11021 654 aaKnown RBP23.69■■□□□ 1.38
MAP1LC3B-208ENST00000570189 PROM2Q8N271 834 aa23.69■■□□□ 1.38
MAP1LC3B-208ENST00000570189 CASZ1Q86V15 1759 aa23.69■■□□□ 1.38
MAP1LC3B-208ENST00000570189 KAT6BQ8WYB5 2073 aa23.68■■□□□ 1.38
MAP1LC3B-208ENST00000570189 LTV1Q96GA3 475 aaPredicted RBP23.68■■□□□ 1.38
MAP1LC3B-208ENST00000570189 MEGF6O75095 1541 aa23.68■■□□□ 1.38
MAP1LC3B-208ENST00000570189 NCAPD2Q15021 1401 aa23.67■■□□□ 1.38
MAP1LC3B-208ENST00000570189 PAPPAQ13219 1627 aa23.66■■□□□ 1.38
MAP1LC3B-208ENST00000570189 KCNQ2O43526 872 aa23.65■■□□□ 1.38
MAP1LC3B-208ENST00000570189 NBPF6Q5VWK0 638 aa23.65■■□□□ 1.38
MAP1LC3B-208ENST00000570189 NBPF4Q96M43 638 aa23.65■■□□□ 1.38
MAP1LC3B-208ENST00000570189 DOT1LQ8TEK3 1739 aa23.64■■□□□ 1.38
MAP1LC3B-208ENST00000570189 TXNRD1Q16881 649 aa23.64■■□□□ 1.37
MAP1LC3B-208ENST00000570189 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms