RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 PLA2R1Q13018 1463 aa9.75□□□□□ -0.85
UBFD1-209ENST00000569919 A6NJR5 290 aa9.75□□□□□ -0.85
UBFD1-209ENST00000569919 FUT2Q10981 343 aa9.75□□□□□ -0.85
UBFD1-209ENST00000569919 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
UBFD1-209ENST00000569919 ANKRD13DQ6ZTN6 518 aa9.75□□□□□ -0.85
UBFD1-209ENST00000569919 HRCP23327 699 aa9.74□□□□□ -0.85
UBFD1-209ENST00000569919 GRIPAP1Q4V328 841 aa9.74□□□□□ -0.85
UBFD1-209ENST00000569919 LRCH3Q96II8 777 aa9.74□□□□□ -0.85
UBFD1-209ENST00000569919 ZBTB3Q9H5J0 574 aa9.74□□□□□ -0.85
UBFD1-209ENST00000569919 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
UBFD1-209ENST00000569919 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
UBFD1-209ENST00000569919 KIF14Q15058 1648 aa9.73□□□□□ -0.85
UBFD1-209ENST00000569919 ABCA6Q8N139 1617 aa9.73□□□□□ -0.85
UBFD1-209ENST00000569919 AP1G2O75843 785 aa9.72□□□□□ -0.85
UBFD1-209ENST00000569919 ATP6V1AP38606 617 aa9.72□□□□□ -0.85
UBFD1-209ENST00000569919 KMT5BQ4FZB7 885 aa9.72□□□□□ -0.85
UBFD1-209ENST00000569919 POM121Q96HA1 1249 aa9.72□□□□□ -0.85
UBFD1-209ENST00000569919 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
UBFD1-209ENST00000569919 TCOF1Q13428 1488 aaKnown RBP9.72□□□□□ -0.85
UBFD1-209ENST00000569919 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
UBFD1-209ENST00000569919 MROH2AA6NES4 1674 aa9.71□□□□□ -0.85
UBFD1-209ENST00000569919 GOLGA8CPA6NN73 597 aa9.71□□□□□ -0.86
UBFD1-209ENST00000569919 GGT6Q6P531 493 aa9.71□□□□□ -0.86
UBFD1-209ENST00000569919 RAD21O60216 631 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 MTMR14Q8NCE2 650 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 NECTIN2Q92692 538 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
UBFD1-209ENST00000569919 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 KIDINS220Q9ULH0 1771 aa9.7□□□□□ -0.86
UBFD1-209ENST00000569919 TRAK2O60296 914 aa9.69□□□□□ -0.86
UBFD1-209ENST00000569919 HNRNPMP52272 730 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBFD1-209ENST00000569919 MTMR2Q13614 643 aa9.69□□□□□ -0.86
UBFD1-209ENST00000569919 ANKLE2Q86XL3 938 aa9.69□□□□□ -0.86
UBFD1-209ENST00000569919 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
UBFD1-209ENST00000569919 CPS1P31327 1500 aa9.68□□□□□ -0.86
UBFD1-209ENST00000569919 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
UBFD1-209ENST00000569919 ARXQ96QS3 562 aa9.68□□□□□ -0.86
UBFD1-209ENST00000569919 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
UBFD1-209ENST00000569919 ABCC1P33527 1531 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 SHANK2Q9UPX8 1470 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 SOWAHBA6NEL2 793 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 C6orf229H3BNL8 230 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 APBB1O00213 710 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 PPP4CP60510 307 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 PUS10Q3MIT2 529 aaKnown RBP9.67□□□□□ -0.86
UBFD1-209ENST00000569919 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-209ENST00000569919 THEMISQ8N1K5 641 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-209ENST00000569919 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
UBFD1-209ENST00000569919 SUPT6HQ7KZ85 1726 aaKnown RBP9.67□□□□□ -0.86
UBFD1-209ENST00000569919 CEP170BQ9Y4F5 1589 aaPredicted RBP9.67□□□□□ -0.86
UBFD1-209ENST00000569919 A2ML1A8K2U0 1454 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 BCAMP50895 628 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 MORN1Q5T089 497 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 SYMPKQ92797 1274 aaKnown RBP9.66□□□□□ -0.86
UBFD1-209ENST00000569919 HPS5Q9UPZ3 1129 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 ZNF142P52746 1687 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-209ENST00000569919 ITSN2Q9NZM3 1697 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
UBFD1-209ENST00000569919 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
UBFD1-209ENST00000569919 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-209ENST00000569919 WNT2BQ93097 391 aa9.65□□□□□ -0.86
UBFD1-209ENST00000569919 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
UBFD1-209ENST00000569919 SAMD9LQ8IVG5 1584 aa9.65□□□□□ -0.86
UBFD1-209ENST00000569919 A2MP01023 1474 aa9.65□□□□□ -0.87
UBFD1-209ENST00000569919 PREX2Q70Z35 1606 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 TSC1Q92574 1164 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 CFDP1Q9UEE9 299 aaPredicted RBP9.64□□□□□ -0.87
UBFD1-209ENST00000569919 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
UBFD1-209ENST00000569919 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 CLTCQ00610 1675 aaKnown RBP9.64□□□□□ -0.87
UBFD1-209ENST00000569919 KIAA1107Q9UPP5 1409 aa9.64□□□□□ -0.87
UBFD1-209ENST00000569919 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
UBFD1-209ENST00000569919 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
UBFD1-209ENST00000569919 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
UBFD1-209ENST00000569919 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
UBFD1-209ENST00000569919 DNMT1P26358 1616 aaKnown RBP9.63□□□□□ -0.87
UBFD1-209ENST00000569919 CCDC18Q5T9S5 1454 aa9.62□□□□□ -0.87
UBFD1-209ENST00000569919 APLP1P51693 650 aa9.62□□□□□ -0.87
UBFD1-209ENST00000569919 RGS17Q9UGC6 210 aaPredicted RBP9.62□□□□□ -0.87
UBFD1-209ENST00000569919 TNRQ92752 1358 aa9.62□□□□□ -0.87
UBFD1-209ENST00000569919 PLEKHH2Q8IVE3 1493 aa9.61□□□□□ -0.87
UBFD1-209ENST00000569919 Q3C1V9 767 aa9.61□□□□□ -0.87
UBFD1-209ENST00000569919 PRR7Q8TB68 274 aa9.61□□□□□ -0.87
UBFD1-209ENST00000569919 PRM3Q9NNZ6 103 aa9.61□□□□□ -0.87
UBFD1-209ENST00000569919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.61□□□□□ -0.87
UBFD1-209ENST00000569919 ATP7AQ04656 1500 aa9.61□□□□□ -0.87
UBFD1-209ENST00000569919 CASKIN1Q8WXD9 1431 aa9.6□□□□□ -0.87
UBFD1-209ENST00000569919 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
UBFD1-209ENST00000569919 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-209ENST00000569919 ARID3AQ99856 593 aa9.6□□□□□ -0.87
UBFD1-209ENST00000569919 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
UBFD1-209ENST00000569919 GPATCH8Q9UKJ3 1502 aaKnown RBP9.6□□□□□ -0.87
UBFD1-209ENST00000569919 CDC42BPAQ5VT25 1732 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 WASHC2CQ9Y4E1 1318 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 KIF3BO15066 747 aa9.59□□□□□ -0.87
UBFD1-209ENST00000569919 ABL2P42684 1182 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms