RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
SMG1-216ENST00000569122 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
SMG1-216ENST00000569122 NLRP6P59044 892 aa12.68□□□□□ -0.38
SMG1-216ENST00000569122 SLC16A10Q8TF71 515 aa12.68□□□□□ -0.38
SMG1-216ENST00000569122 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
SMG1-216ENST00000569122 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
SMG1-216ENST00000569122 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
SMG1-216ENST00000569122 POLD1P28340 1107 aa12.67□□□□□ -0.38
SMG1-216ENST00000569122 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
SMG1-216ENST00000569122 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
SMG1-216ENST00000569122 CSB-PGBD3P0DP91 1061 aa12.66□□□□□ -0.38
SMG1-216ENST00000569122 PTF1AQ7RTS3 328 aa12.66□□□□□ -0.38
SMG1-216ENST00000569122 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
SMG1-216ENST00000569122 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
SMG1-216ENST00000569122 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
SMG1-216ENST00000569122 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
SMG1-216ENST00000569122 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
SMG1-216ENST00000569122 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
SMG1-216ENST00000569122 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
SMG1-216ENST00000569122 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
SMG1-216ENST00000569122 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
SMG1-216ENST00000569122 MYOM1P52179 1685 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
SMG1-216ENST00000569122 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
SMG1-216ENST00000569122 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
SMG1-216ENST00000569122 CEP350Q5VT06 3117 aa12.6□□□□□ -0.39
SMG1-216ENST00000569122 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
SMG1-216ENST00000569122 CABP2Q9NPB3 220 aa12.58□□□□□ -0.4
SMG1-216ENST00000569122 USP6P35125 1406 aa12.57□□□□□ -0.4
SMG1-216ENST00000569122 HSPA6P17066 643 aa12.57□□□□□ -0.4
SMG1-216ENST00000569122 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
SMG1-216ENST00000569122 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
SMG1-216ENST00000569122 LRRC37A3O60309 1634 aa12.57□□□□□ -0.4
SMG1-216ENST00000569122 CENPJQ9HC77 1338 aaPredicted RBP12.57□□□□□ -0.4
SMG1-216ENST00000569122 CHD4Q14839 1912 aa12.56□□□□□ -0.4
SMG1-216ENST00000569122 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
SMG1-216ENST00000569122 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
SMG1-216ENST00000569122 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 IL2RBP14784 551 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 SLIT3O75094 1523 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
SMG1-216ENST00000569122 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
SMG1-216ENST00000569122 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
SMG1-216ENST00000569122 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
SMG1-216ENST00000569122 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
SMG1-216ENST00000569122 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.4
SMG1-216ENST00000569122 SOX12O15370 315 aa12.52□□□□□ -0.41
SMG1-216ENST00000569122 NLGN2Q8NFZ4 835 aa12.52□□□□□ -0.41
SMG1-216ENST00000569122 SBF2Q86WG5 1849 aa12.52□□□□□ -0.41
SMG1-216ENST00000569122 PNPLA7Q6ZV29 1317 aa12.51□□□□□ -0.41
SMG1-216ENST00000569122 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
SMG1-216ENST00000569122 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
SMG1-216ENST00000569122 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
SMG1-216ENST00000569122 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
SMG1-216ENST00000569122 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
SMG1-216ENST00000569122 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SMG1-216ENST00000569122 MSH5O43196 834 aa12.49□□□□□ -0.41
SMG1-216ENST00000569122 YBX3P16989 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMG1-216ENST00000569122 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
SMG1-216ENST00000569122 ABCC6O95255 1503 aa12.48□□□□□ -0.41
SMG1-216ENST00000569122 APLP1P51693 650 aa12.48□□□□□ -0.41
SMG1-216ENST00000569122 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
SMG1-216ENST00000569122 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
SMG1-216ENST00000569122 SYTL4Q96C24 671 aaPredicted RBP12.47□□□□□ -0.41
SMG1-216ENST00000569122 AKAP12Q02952 1782 aa12.46□□□□□ -0.41
SMG1-216ENST00000569122 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
SMG1-216ENST00000569122 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
SMG1-216ENST00000569122 PAPPAQ13219 1627 aa12.45□□□□□ -0.42
SMG1-216ENST00000569122 TRPM1Q7Z4N2 1603 aa12.45□□□□□ -0.42
SMG1-216ENST00000569122 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
SMG1-216ENST00000569122 COL18A1P39060 1754 aa12.45□□□□□ -0.42
SMG1-216ENST00000569122 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
SMG1-216ENST00000569122 KTN1Q86UP2 1357 aaKnown RBP12.44□□□□□ -0.42
SMG1-216ENST00000569122 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
SMG1-216ENST00000569122 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
SMG1-216ENST00000569122 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
SMG1-216ENST00000569122 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
SMG1-216ENST00000569122 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
SMG1-216ENST00000569122 ADCY9O60503 1353 aa12.42□□□□□ -0.42
SMG1-216ENST00000569122 USP47Q96K76 1375 aa12.42□□□□□ -0.42
SMG1-216ENST00000569122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMG1-216ENST00000569122 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
SMG1-216ENST00000569122 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 TOMM70O94826 608 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 KCNQ4P56696 695 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
SMG1-216ENST00000569122 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
SMG1-216ENST00000569122 IP6K1Q92551 441 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 PIK3C2AO00443 1686 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 NFAT5O94916 1531 aa12.4□□□□□ -0.42
SMG1-216ENST00000569122 KIF3CO14782 793 aa12.39□□□□□ -0.43
SMG1-216ENST00000569122 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
SMG1-216ENST00000569122 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms