RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 SOX12O15370 315 aa22.9■■□□□ 1.26
NEIL1-221ENST00000569035 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.26
NEIL1-221ENST00000569035 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.26
NEIL1-221ENST00000569035 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
NEIL1-221ENST00000569035 FCHSD2O94868 740 aa22.89■■□□□ 1.26
NEIL1-221ENST00000569035 CRBNQ96SW2 442 aa22.89■■□□□ 1.26
NEIL1-221ENST00000569035 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
NEIL1-221ENST00000569035 MS4A1P11836 297 aa22.89■■□□□ 1.25
NEIL1-221ENST00000569035 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
NEIL1-221ENST00000569035 KIF1AQ12756 1690 aa22.88■■□□□ 1.25
NEIL1-221ENST00000569035 POLKQ9UBT6 870 aa22.88■■□□□ 1.25
NEIL1-221ENST00000569035 RRS1Q15050 365 aaKnown RBP22.87■■□□□ 1.25
NEIL1-221ENST00000569035 PPM1GO15355 546 aaPredicted RBP22.86■■□□□ 1.25
NEIL1-221ENST00000569035 PIP4K2BP78356 416 aa22.86■■□□□ 1.25
NEIL1-221ENST00000569035 PLEKHF1Q96S99 279 aa22.86■■□□□ 1.25
NEIL1-221ENST00000569035 PLIN1O60240 522 aa22.86■■□□□ 1.25
NEIL1-221ENST00000569035 PLEKHG5O94827 1062 aa22.86■■□□□ 1.25
NEIL1-221ENST00000569035 EMILIN1Q9Y6C2 1016 aa22.86■■□□□ 1.25
NEIL1-221ENST00000569035 U2SURPO15042 1029 aaKnown RBP22.85■■□□□ 1.25
NEIL1-221ENST00000569035 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
NEIL1-221ENST00000569035 MYT1Q01538 1121 aa22.84■■□□□ 1.25
NEIL1-221ENST00000569035 CENPQQ7L2Z9 268 aaPredicted RBP22.84■■□□□ 1.25
NEIL1-221ENST00000569035 PIK3C2AO00443 1686 aa22.84■■□□□ 1.25
NEIL1-221ENST00000569035 CALD1Q05682 793 aaKnown RBP22.83■■□□□ 1.24
NEIL1-221ENST00000569035 TOM1O60784 492 aa22.82■■□□□ 1.24
NEIL1-221ENST00000569035 TMPOP42166 694 aaKnown RBP22.82■■□□□ 1.24
NEIL1-221ENST00000569035 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
NEIL1-221ENST00000569035 PXDNQ92626 1479 aa22.82■■□□□ 1.24
NEIL1-221ENST00000569035 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
NEIL1-221ENST00000569035 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
NEIL1-221ENST00000569035 SPATA31A3Q5VYP0 1347 aa22.8■■□□□ 1.24
NEIL1-221ENST00000569035 CANXP27824 592 aaKnown RBP22.78■■□□□ 1.24
NEIL1-221ENST00000569035 ZNF428Q96B54 188 aa22.78■■□□□ 1.24
NEIL1-221ENST00000569035 RRP7AQ9Y3A4 280 aaKnown RBP22.78■■□□□ 1.24
NEIL1-221ENST00000569035 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
NEIL1-221ENST00000569035 GCP02774 474 aa22.77■■□□□ 1.24
NEIL1-221ENST00000569035 RARSP54136 660 aaKnown RBP22.77■■□□□ 1.24
NEIL1-221ENST00000569035 MAP3K19Q56UN5 1328 aa22.77■■□□□ 1.24
NEIL1-221ENST00000569035 TNS3Q68CZ2 1445 aa22.76■■□□□ 1.23
NEIL1-221ENST00000569035 LMOD3Q0VAK6 560 aa22.76■■□□□ 1.23
NEIL1-221ENST00000569035 C20orf194Q5TEA3 1177 aa22.75■■□□□ 1.23
NEIL1-221ENST00000569035 KCNH5Q8NCM2 988 aa22.75■■□□□ 1.23
NEIL1-221ENST00000569035 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
NEIL1-221ENST00000569035 USP19O94966 1318 aa22.74■■□□□ 1.23
NEIL1-221ENST00000569035 KDM2BQ8NHM5 1336 aa22.74■■□□□ 1.23
NEIL1-221ENST00000569035 BCAR3O75815 825 aa22.73■■□□□ 1.23
NEIL1-221ENST00000569035 AMPHP49418 695 aa22.73■■□□□ 1.23
NEIL1-221ENST00000569035 RIPK4P57078 832 aa22.73■■□□□ 1.23
NEIL1-221ENST00000569035 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
NEIL1-221ENST00000569035 RSPH6AQ9H0K4 717 aa22.73■■□□□ 1.23
NEIL1-221ENST00000569035 HSPA1LP34931 641 aa22.72■■□□□ 1.23
NEIL1-221ENST00000569035 ARHGEF10O15013 1369 aa22.72■■□□□ 1.23
NEIL1-221ENST00000569035 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
NEIL1-221ENST00000569035 TRIM35Q9UPQ4 493 aa22.71■■□□□ 1.23
NEIL1-221ENST00000569035 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
NEIL1-221ENST00000569035 IL13P35225 146 aa22.71■■□□□ 1.23
NEIL1-221ENST00000569035 MARF1Q9Y4F3 1742 aaKnown RBP22.7■■□□□ 1.22
NEIL1-221ENST00000569035 ALS2Q96Q42 1657 aa22.7■■□□□ 1.22
NEIL1-221ENST00000569035 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
NEIL1-221ENST00000569035 ZC3H6P61129 1189 aaKnown RBP22.68■■□□□ 1.22
NEIL1-221ENST00000569035 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
NEIL1-221ENST00000569035 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
NEIL1-221ENST00000569035 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
NEIL1-221ENST00000569035 ARHGEF25Q86VW2 580 aa22.68■■□□□ 1.22
NEIL1-221ENST00000569035 NHSL1Q5SYE7 1610 aa22.67■■□□□ 1.22
NEIL1-221ENST00000569035 HOXC9P31274 260 aa22.67■■□□□ 1.22
NEIL1-221ENST00000569035 ANP32AP39687 249 aaKnown RBP22.67■■□□□ 1.22
NEIL1-221ENST00000569035 MED1Q15648 1581 aaPredicted RBP22.67■■□□□ 1.22
NEIL1-221ENST00000569035 FLT4P35916 1363 aa22.67■■□□□ 1.22
NEIL1-221ENST00000569035 SLIT3O75094 1523 aa22.66■■□□□ 1.22
NEIL1-221ENST00000569035 NFAT5O94916 1531 aa22.66■■□□□ 1.22
NEIL1-221ENST00000569035 EIF4A2Q14240 407 aaKnown RBP22.66■■□□□ 1.22
NEIL1-221ENST00000569035 CLUAP1Q96AJ1 413 aa22.66■■□□□ 1.22
NEIL1-221ENST00000569035 ALDH1L2Q3SY69 923 aa22.66■■□□□ 1.22
NEIL1-221ENST00000569035 ZKSCAN2Q63HK3 967 aa22.66■■□□□ 1.22
NEIL1-221ENST00000569035 IP6K1Q92551 441 aa22.65■■□□□ 1.22
NEIL1-221ENST00000569035 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
NEIL1-221ENST00000569035 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
NEIL1-221ENST00000569035 IPO8O15397 1037 aaKnown RBP22.64■■□□□ 1.22
NEIL1-221ENST00000569035 GNAI1P63096 354 aa22.63■■□□□ 1.21
NEIL1-221ENST00000569035 PEAK1Q9H792 1746 aa22.63■■□□□ 1.21
NEIL1-221ENST00000569035 AHDC1Q5TGY3 1603 aaPredicted RBP22.63■■□□□ 1.21
NEIL1-221ENST00000569035 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
NEIL1-221ENST00000569035 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
NEIL1-221ENST00000569035 FRAT1Q92837 279 aaPredicted RBP22.62■■□□□ 1.21
NEIL1-221ENST00000569035 LTV1Q96GA3 475 aaPredicted RBP22.62■■□□□ 1.21
NEIL1-221ENST00000569035 CHMP4BQ9H444 224 aaKnown RBP22.62■■□□□ 1.21
NEIL1-221ENST00000569035 IFT57Q9NWB7 429 aa22.61■■□□□ 1.21
NEIL1-221ENST00000569035 BACH2Q9BYV9 841 aa22.61■■□□□ 1.21
NEIL1-221ENST00000569035 AXIN2Q9Y2T1 843 aa22.61■■□□□ 1.21
NEIL1-221ENST00000569035 HMOX1P09601 288 aa22.6■■□□□ 1.21
NEIL1-221ENST00000569035 EXOSC9Q06265 439 aaKnown RBP22.6■■□□□ 1.21
NEIL1-221ENST00000569035 PDE4AP27815 886 aa22.59■■□□□ 1.21
NEIL1-221ENST00000569035 RTL1A6NKG5 1358 aa22.59■■□□□ 1.21
NEIL1-221ENST00000569035 CHRNA2Q15822 529 aa22.58■■□□□ 1.21
NEIL1-221ENST00000569035 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
NEIL1-221ENST00000569035 DZIP1LQ8IYY4 767 aaKnown RBP22.58■■□□□ 1.21
NEIL1-221ENST00000569035 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
NEIL1-221ENST00000569035 FTSJ3Q8IY81 847 aaKnown RBP22.58■■□□□ 1.2
NEIL1-221ENST00000569035 SMC4Q9NTJ3 1288 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms