RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 KCTD15Q96SI1 283 aaPredicted RBP16.98■□□□□ 0.31
NIFKP4-201ENST00000567275 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
NIFKP4-201ENST00000567275 AVPP01185 164 aa16.96■□□□□ 0.31
NIFKP4-201ENST00000567275 MCCD1P59942 119 aaPredicted RBP16.95■□□□□ 0.3
NIFKP4-201ENST00000567275 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
NIFKP4-201ENST00000567275 MYT1Q01538 1121 aa16.94■□□□□ 0.3
NIFKP4-201ENST00000567275 TRAF7Q6Q0C0 670 aa16.94■□□□□ 0.3
NIFKP4-201ENST00000567275 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
NIFKP4-201ENST00000567275 NR3C2P08235 984 aa16.92■□□□□ 0.3
NIFKP4-201ENST00000567275 CTC1Q2NKJ3 1217 aa16.92■□□□□ 0.3
NIFKP4-201ENST00000567275 AXIN1O15169 862 aa16.9■□□□□ 0.3
NIFKP4-201ENST00000567275 RAB15P59190 212 aa16.9■□□□□ 0.3
NIFKP4-201ENST00000567275 CCDC116Q8IYX3 515 aa16.9■□□□□ 0.3
NIFKP4-201ENST00000567275 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
NIFKP4-201ENST00000567275 INTS6LQ5JSJ4 861 aaKnown RBP16.88■□□□□ 0.29
NIFKP4-201ENST00000567275 ST8SIA5O15466 376 aa16.87■□□□□ 0.29
NIFKP4-201ENST00000567275 SMCPP49901 116 aaPredicted RBP16.87■□□□□ 0.29
NIFKP4-201ENST00000567275 DHX9Q08211 1270 aaKnown RBP16.87■□□□□ 0.29
NIFKP4-201ENST00000567275 CRIPAKQ8N1N5 446 aa16.87■□□□□ 0.29
NIFKP4-201ENST00000567275 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
NIFKP4-201ENST00000567275 CAPN5O15484 640 aaPredicted RBP16.85■□□□□ 0.29
NIFKP4-201ENST00000567275 GIGYF1O75420 1035 aaPredicted RBP16.85■□□□□ 0.29
NIFKP4-201ENST00000567275 PROSER2Q86WR7 435 aaPredicted RBP16.85■□□□□ 0.29
NIFKP4-201ENST00000567275 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
NIFKP4-201ENST00000567275 ESPNB1AK53 854 aa16.84■□□□□ 0.29
NIFKP4-201ENST00000567275 ZIC2O95409 532 aaPredicted RBP16.84■□□□□ 0.29
NIFKP4-201ENST00000567275 SEMA3FQ13275 785 aa16.84■□□□□ 0.29
NIFKP4-201ENST00000567275 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
NIFKP4-201ENST00000567275 SOX11P35716 441 aa16.83■□□□□ 0.28
NIFKP4-201ENST00000567275 PPP1R26Q5T8A7 1209 aaPredicted RBP16.83■□□□□ 0.28
NIFKP4-201ENST00000567275 PGPEP1Q9NXJ5 209 aa16.83■□□□□ 0.28
NIFKP4-201ENST00000567275 A6NJR5 290 aa16.82■□□□□ 0.28
NIFKP4-201ENST00000567275 LCE2BO14633 110 aa16.82■□□□□ 0.28
NIFKP4-201ENST00000567275 TIMP2P16035 220 aa16.82■□□□□ 0.28
NIFKP4-201ENST00000567275 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
NIFKP4-201ENST00000567275 ITPKCQ96DU7 683 aa16.82■□□□□ 0.28
NIFKP4-201ENST00000567275 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
NIFKP4-201ENST00000567275 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
NIFKP4-201ENST00000567275 ZFAND3Q9H8U3 227 aa16.79■□□□□ 0.28
NIFKP4-201ENST00000567275 ERVH48-1M5A8F1 160 aa16.78■□□□□ 0.28
NIFKP4-201ENST00000567275 CCDC125Q86Z20 511 aa16.77■□□□□ 0.28
NIFKP4-201ENST00000567275 TRIM52Q96A61 297 aa16.77■□□□□ 0.28
NIFKP4-201ENST00000567275 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
NIFKP4-201ENST00000567275 FNBP4Q8N3X1 1017 aaPredicted RBP16.76■□□□□ 0.27
NIFKP4-201ENST00000567275 TMPRSS4Q9NRS4 437 aa16.76■□□□□ 0.27
NIFKP4-201ENST00000567275 POM121CA8CG34 1229 aa16.75■□□□□ 0.27
NIFKP4-201ENST00000567275 DACH1Q9UI36 760 aa16.73■□□□□ 0.27
NIFKP4-201ENST00000567275 ZNF784Q8NCA9 323 aaPredicted RBP16.72■□□□□ 0.27
NIFKP4-201ENST00000567275 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
NIFKP4-201ENST00000567275 ATP13A2Q9NQ11 1180 aa16.71■□□□□ 0.27
NIFKP4-201ENST00000567275 PCDHB11Q9Y5F2 797 aa16.71■□□□□ 0.27
NIFKP4-201ENST00000567275 BMP1P13497 986 aa16.7■□□□□ 0.26
NIFKP4-201ENST00000567275 ALG2Q9H553 416 aa16.7■□□□□ 0.26
NIFKP4-201ENST00000567275 CBLBQ13191 982 aa16.68■□□□□ 0.26
NIFKP4-201ENST00000567275 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
NIFKP4-201ENST00000567275 CYLDQ9NQC7 956 aa16.68■□□□□ 0.26
NIFKP4-201ENST00000567275 UPP2O95045 317 aa16.67■□□□□ 0.26
NIFKP4-201ENST00000567275 HDGFL1Q5TGJ6 251 aa16.67■□□□□ 0.26
NIFKP4-201ENST00000567275 MRPL14Q6P1L8 145 aaKnown RBP16.67■□□□□ 0.26
NIFKP4-201ENST00000567275 MEIOBQ8N635 442 aa16.67■□□□□ 0.26
NIFKP4-201ENST00000567275 TRAK2O60296 914 aa16.66■□□□□ 0.26
NIFKP4-201ENST00000567275 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
NIFKP4-201ENST00000567275 SCARF1Q14162 830 aa16.65■□□□□ 0.26
NIFKP4-201ENST00000567275 TRIM46Q7Z4K8 759 aa16.65■□□□□ 0.26
NIFKP4-201ENST00000567275 PHTF2Q8N3S3 785 aa16.65■□□□□ 0.26
NIFKP4-201ENST00000567275 CCDC85AQ96PX6 553 aaPredicted RBP16.65■□□□□ 0.26
NIFKP4-201ENST00000567275 Q6ZVU0 165 aa16.64■□□□□ 0.25
NIFKP4-201ENST00000567275 C14orf37Q86TY3 774 aa16.64■□□□□ 0.25
NIFKP4-201ENST00000567275 ADAMTS19Q8TE59 1207 aa16.64■□□□□ 0.25
NIFKP4-201ENST00000567275 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
NIFKP4-201ENST00000567275 LILRA1O75019 489 aa16.63■□□□□ 0.25
NIFKP4-201ENST00000567275 CC2D2BQ6DHV5 1058 aa16.63■□□□□ 0.25
NIFKP4-201ENST00000567275 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
NIFKP4-201ENST00000567275 GLMNQ92990 594 aa16.62■□□□□ 0.25
NIFKP4-201ENST00000567275 TSEN34Q9BSV6 310 aaKnown RBP16.62■□□□□ 0.25
NIFKP4-201ENST00000567275 LINC00528Q8N1L1 170 aa16.61■□□□□ 0.25
NIFKP4-201ENST00000567275 PURBQ96QR8 312 aaKnown RBP16.61■□□□□ 0.25
NIFKP4-201ENST00000567275 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
NIFKP4-201ENST00000567275 BMP2P12643 396 aa16.6■□□□□ 0.25
NIFKP4-201ENST00000567275 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
NIFKP4-201ENST00000567275 C6orf118Q5T5N4 469 aa16.6■□□□□ 0.25
NIFKP4-201ENST00000567275 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 PLPP7Q8NBV4 271 aa16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 CALR3Q96L12 384 aaKnown RBP16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 ZNF777Q9ULD5 760 aaPredicted RBP16.59■□□□□ 0.25
NIFKP4-201ENST00000567275 ADH1AP07327 375 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 SKIP12755 728 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 SCTRP47872 440 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 MAP7D1Q3KQU3 841 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 ZNF787Q6DD87 383 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 AGBL1Q96MI9 1066 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 ZFP42Q96MM3 310 aa16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
NIFKP4-201ENST00000567275 RELBQ01201 579 aa16.57■□□□□ 0.24
NIFKP4-201ENST00000567275 OXLD1Q5BKU9 147 aa16.57■□□□□ 0.24
NIFKP4-201ENST00000567275 KIFC2Q96AC6 838 aa16.57■□□□□ 0.24
NIFKP4-201ENST00000567275 CHIC2Q9UKJ5 165 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms