RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 AXIN2Q9Y2T1 843 aa19.37■□□□□ 0.69
COMMD4-214ENST00000566230 ANO8Q9HCE9 1232 aaPredicted RBP19.36■□□□□ 0.69
COMMD4-214ENST00000566230 CASZ1Q86V15 1759 aa19.36■□□□□ 0.69
COMMD4-214ENST00000566230 TOM1L2Q6ZVM7 507 aa19.35■□□□□ 0.69
COMMD4-214ENST00000566230 PROM2Q8N271 834 aa19.35■□□□□ 0.69
COMMD4-214ENST00000566230 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-214ENST00000566230 BCL11BQ9C0K0 894 aaPredicted RBP19.35■□□□□ 0.69
COMMD4-214ENST00000566230 WDR17Q8IZU2 1322 aa19.34■□□□□ 0.69
COMMD4-214ENST00000566230 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
COMMD4-214ENST00000566230 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.69
COMMD4-214ENST00000566230 PDGFDQ9GZP0 370 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-214ENST00000566230 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
COMMD4-214ENST00000566230 BCL9O00512 1426 aa19.31■□□□□ 0.68
COMMD4-214ENST00000566230 CPSF1Q10570 1443 aaKnown RBP19.31■□□□□ 0.68
COMMD4-214ENST00000566230 TTC21BQ7Z4L5 1316 aa19.29■□□□□ 0.68
COMMD4-214ENST00000566230 CDCA7Q9BWT1 371 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-214ENST00000566230 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
COMMD4-214ENST00000566230 L3MBTL2Q969R5 705 aa19.28■□□□□ 0.68
COMMD4-214ENST00000566230 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
COMMD4-214ENST00000566230 TRPM1Q7Z4N2 1603 aa19.28■□□□□ 0.68
COMMD4-214ENST00000566230 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-214ENST00000566230 DCAF8L1A6NGE4 600 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 SOX12O15370 315 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 ZBTB7AO95365 584 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 PTGER2P43116 358 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 MYOM1P52179 1685 aa19.26■□□□□ 0.67
COMMD4-214ENST00000566230 NFAT5O94916 1531 aa19.25■□□□□ 0.67
COMMD4-214ENST00000566230 TXNRD1Q16881 649 aa19.25■□□□□ 0.67
COMMD4-214ENST00000566230 EXOC5O00471 708 aa19.24■□□□□ 0.67
COMMD4-214ENST00000566230 CSB-PGBD3P0DP91 1061 aa19.24■□□□□ 0.67
COMMD4-214ENST00000566230 ATF5Q9Y2D1 282 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-214ENST00000566230 TTC21AQ8NDW8 1320 aa19.24■□□□□ 0.67
COMMD4-214ENST00000566230 SLC15A2Q16348 729 aa19.22■□□□□ 0.67
COMMD4-214ENST00000566230 STK32BQ9NY57 414 aa19.21■□□□□ 0.67
COMMD4-214ENST00000566230 CCDC7Q96M83 1385 aa19.2■□□□□ 0.66
COMMD4-214ENST00000566230 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
COMMD4-214ENST00000566230 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
COMMD4-214ENST00000566230 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
COMMD4-214ENST00000566230 KTN1Q86UP2 1357 aaKnown RBP19.19■□□□□ 0.66
COMMD4-214ENST00000566230 TNS2Q63HR2 1409 aa19.19■□□□□ 0.66
COMMD4-214ENST00000566230 SIN3AQ96ST3 1273 aa19.19■□□□□ 0.66
COMMD4-214ENST00000566230 ABCC6O95255 1503 aa19.19■□□□□ 0.66
COMMD4-214ENST00000566230 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-214ENST00000566230 SGIP1Q9BQI5 828 aa19.18■□□□□ 0.66
COMMD4-214ENST00000566230 SYT17Q9BSW7 474 aa19.17■□□□□ 0.66
COMMD4-214ENST00000566230 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-214ENST00000566230 USP54Q70EL1 1684 aa19.17■□□□□ 0.66
COMMD4-214ENST00000566230 ROCK2O75116 1388 aaKnown RBP19.17■□□□□ 0.66
COMMD4-214ENST00000566230 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
COMMD4-214ENST00000566230 MTFR1LQ9H019 292 aa19.16■□□□□ 0.66
COMMD4-214ENST00000566230 USP31Q70CQ4 1352 aa19.16■□□□□ 0.66
COMMD4-214ENST00000566230 LTN1O94822 1766 aa19.16■□□□□ 0.66
COMMD4-214ENST00000566230 BTAF1O14981 1849 aa19.16■□□□□ 0.66
COMMD4-214ENST00000566230 PAPPAQ13219 1627 aa19.15■□□□□ 0.66
COMMD4-214ENST00000566230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.15■□□□□ 0.66
COMMD4-214ENST00000566230 CHD4Q14839 1912 aa19.15■□□□□ 0.66
COMMD4-214ENST00000566230 UTRNP46939 3433 aa19.15■□□□□ 0.66
COMMD4-214ENST00000566230 NLRP2Q9NX02 1062 aa19.14■□□□□ 0.65
COMMD4-214ENST00000566230 ERBB3P21860 1342 aa19.14■□□□□ 0.65
COMMD4-214ENST00000566230 NME9Q86XW9 330 aa19.13■□□□□ 0.65
COMMD4-214ENST00000566230 ZNF784Q8NCA9 323 aaPredicted RBP19.13■□□□□ 0.65
COMMD4-214ENST00000566230 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
COMMD4-214ENST00000566230 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
COMMD4-214ENST00000566230 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
COMMD4-214ENST00000566230 IL2RBP14784 551 aa19.11■□□□□ 0.65
COMMD4-214ENST00000566230 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
COMMD4-214ENST00000566230 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
COMMD4-214ENST00000566230 ANKRD24Q8TF21 1146 aa19.09■□□□□ 0.65
COMMD4-214ENST00000566230 ARXQ96QS3 562 aa19.09■□□□□ 0.65
COMMD4-214ENST00000566230 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
COMMD4-214ENST00000566230 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
COMMD4-214ENST00000566230 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
COMMD4-214ENST00000566230 QSER1Q2KHR3 1735 aa19.05■□□□□ 0.64
COMMD4-214ENST00000566230 COL24A1Q17RW2 1714 aa19.04■□□□□ 0.64
COMMD4-214ENST00000566230 EDC4Q6P2E9 1401 aaKnown RBP19.04■□□□□ 0.64
COMMD4-214ENST00000566230 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
COMMD4-214ENST00000566230 AKT1S1Q96B36 256 aa19.04■□□□□ 0.64
COMMD4-214ENST00000566230 TUBGCP6Q96RT7 1819 aa19.03■□□□□ 0.64
COMMD4-214ENST00000566230 IP6K1Q92551 441 aa19.02■□□□□ 0.64
COMMD4-214ENST00000566230 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
COMMD4-214ENST00000566230 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
COMMD4-214ENST00000566230 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
COMMD4-214ENST00000566230 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
COMMD4-214ENST00000566230 RGPD2P0DJD1 1756 aa19.01■□□□□ 0.63
COMMD4-214ENST00000566230 SLC27A3Q5K4L6 730 aa19■□□□□ 0.63
COMMD4-214ENST00000566230 PNPLA7Q6ZV29 1317 aa19■□□□□ 0.63
COMMD4-214ENST00000566230 KCNQ4P56696 695 aa18.99■□□□□ 0.63
COMMD4-214ENST00000566230 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
COMMD4-214ENST00000566230 LTV1Q96GA3 475 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-214ENST00000566230 TERF2IPQ9NYB0 399 aa18.99■□□□□ 0.63
COMMD4-214ENST00000566230 LY75O60449 1722 aa18.98■□□□□ 0.63
COMMD4-214ENST00000566230 SHANK3Q9BYB0 1731 aa18.98■□□□□ 0.63
COMMD4-214ENST00000566230 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
COMMD4-214ENST00000566230 PRIM1P49642 420 aaKnown RBP18.97■□□□□ 0.63
COMMD4-214ENST00000566230 GPR162Q16538 588 aa18.97■□□□□ 0.63
COMMD4-214ENST00000566230 PUS7Q96PZ0 661 aaKnown RBP18.97■□□□□ 0.63
COMMD4-214ENST00000566230 FBLN1P23142 703 aa18.96■□□□□ 0.63
COMMD4-214ENST00000566230 C1QTNF8P60827 252 aa18.96■□□□□ 0.63
COMMD4-214ENST00000566230 NSD2O96028 1365 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms