RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 SBNO2Q9Y2G9 1366 aa26.91■■□□□ 1.9
ABCA3-204ENST00000566200 TTC21AQ8NDW8 1320 aa26.9■■□□□ 1.9
ABCA3-204ENST00000566200 WDR17Q8IZU2 1322 aa26.9■■□□□ 1.9
ABCA3-204ENST00000566200 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
ABCA3-204ENST00000566200 CD163L1Q9NR16 1453 aa26.88■■□□□ 1.89
ABCA3-204ENST00000566200 TOM1L2Q6ZVM7 507 aa26.88■■□□□ 1.89
ABCA3-204ENST00000566200 OVOS2A0A0G2JMS6 1433 aa26.88■■□□□ 1.89
ABCA3-204ENST00000566200 OVOS2A0A0J9YW53 1432 aa26.88■■□□□ 1.89
ABCA3-204ENST00000566200 OVOS2Q6IE36 1432 aa26.88■■□□□ 1.89
ABCA3-204ENST00000566200 USP54Q70EL1 1684 aa26.87■■□□□ 1.89
ABCA3-204ENST00000566200 KCNH5Q8NCM2 988 aa26.87■■□□□ 1.89
ABCA3-204ENST00000566200 SOX12O15370 315 aa26.86■■□□□ 1.89
ABCA3-204ENST00000566200 RGPD3A6NKT7 1758 aaPredicted RBP26.84■■□□□ 1.89
ABCA3-204ENST00000566200 RGPD4Q7Z3J3 1758 aa26.84■■□□□ 1.89
ABCA3-204ENST00000566200 DDB1Q16531 1140 aa26.84■■□□□ 1.89
ABCA3-204ENST00000566200 CARD11Q9BXL7 1154 aa26.84■■□□□ 1.89
ABCA3-204ENST00000566200 ABCC6O95255 1503 aa26.82■■□□□ 1.88
ABCA3-204ENST00000566200 USP31Q70CQ4 1352 aa26.82■■□□□ 1.88
ABCA3-204ENST00000566200 C11orf95C9JLR9 678 aaPredicted RBP26.81■■□□□ 1.88
ABCA3-204ENST00000566200 PTF1AQ7RTS3 328 aa26.81■■□□□ 1.88
ABCA3-204ENST00000566200 MARCH10Q8NA82 808 aaPredicted RBP26.8■■□□□ 1.88
ABCA3-204ENST00000566200 CARD10Q9BWT7 1032 aa26.8■■□□□ 1.88
ABCA3-204ENST00000566200 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.79■■□□□ 1.88
ABCA3-204ENST00000566200 LTN1O94822 1766 aa26.79■■□□□ 1.88
ABCA3-204ENST00000566200 NME9Q86XW9 330 aa26.78■■□□□ 1.88
ABCA3-204ENST00000566200 BCL9O00512 1426 aa26.77■■□□□ 1.88
ABCA3-204ENST00000566200 TONSLQ96HA7 1378 aa26.76■■□□□ 1.87
ABCA3-204ENST00000566200 CDCA7Q9BWT1 371 aaPredicted RBP26.76■■□□□ 1.87
ABCA3-204ENST00000566200 SLC12A5Q9H2X9 1139 aa26.76■■□□□ 1.87
ABCA3-204ENST00000566200 CSB-PGBD3P0DP91 1061 aa26.75■■□□□ 1.87
ABCA3-204ENST00000566200 NBPF14Q5TI25 921 aa26.75■■□□□ 1.87
ABCA3-204ENST00000566200 PLSCR1O15162 318 aa26.74■■□□□ 1.87
ABCA3-204ENST00000566200 BCL11BQ9C0K0 894 aaPredicted RBP26.74■■□□□ 1.87
ABCA3-204ENST00000566200 TMC1Q8TDI8 760 aa26.73■■□□□ 1.87
ABCA3-204ENST00000566200 CCDC7Q96M83 1385 aa26.72■■□□□ 1.87
ABCA3-204ENST00000566200 EDC4Q6P2E9 1401 aaKnown RBP26.72■■□□□ 1.87
ABCA3-204ENST00000566200 A0A1W2PP64 1363 aa26.71■■□□□ 1.87
ABCA3-204ENST00000566200 TNS2Q63HR2 1409 aa26.71■■□□□ 1.87
ABCA3-204ENST00000566200 ERBB3P21860 1342 aa26.7■■□□□ 1.87
ABCA3-204ENST00000566200 HDGFL2Q7Z4V5 671 aaPredicted RBP26.69■■□□□ 1.86
ABCA3-204ENST00000566200 PROM2Q8N271 834 aa26.69■■□□□ 1.86
ABCA3-204ENST00000566200 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
ABCA3-204ENST00000566200 CASZ1Q86V15 1759 aa26.69■■□□□ 1.86
ABCA3-204ENST00000566200 TESK2Q96S53 571 aa26.68■■□□□ 1.86
ABCA3-204ENST00000566200 EXOC5O00471 708 aa26.67■■□□□ 1.86
ABCA3-204ENST00000566200 PUS7Q96PZ0 661 aaKnown RBP26.67■■□□□ 1.86
ABCA3-204ENST00000566200 NHSQ6T4R5 1651 aa26.66■■□□□ 1.86
ABCA3-204ENST00000566200 TERF2IPQ9NYB0 399 aa26.65■■□□□ 1.86
ABCA3-204ENST00000566200 NLRP2Q9NX02 1062 aa26.63■■□□□ 1.85
ABCA3-204ENST00000566200 ST20-MTHFSA0A0A6YYL1 179 aa26.62■■□□□ 1.85
ABCA3-204ENST00000566200 KCNQ2O43526 872 aa26.62■■□□□ 1.85
ABCA3-204ENST00000566200 ANKRD24Q8TF21 1146 aa26.62■■□□□ 1.85
ABCA3-204ENST00000566200 PDGFDQ9GZP0 370 aaPredicted RBP26.61■■□□□ 1.85
ABCA3-204ENST00000566200 SPON1Q9HCB6 807 aa26.61■■□□□ 1.85
ABCA3-204ENST00000566200 TXNRD1Q16881 649 aa26.59■■□□□ 1.85
ABCA3-204ENST00000566200 NINLQ9Y2I6 1382 aa26.58■■□□□ 1.85
ABCA3-204ENST00000566200 IL2RBP14784 551 aa26.58■■□□□ 1.85
ABCA3-204ENST00000566200 FAM208AQ9UK61 1670 aaKnown RBP26.57■■□□□ 1.84
ABCA3-204ENST00000566200 BTAF1O14981 1849 aa26.56■■□□□ 1.84
ABCA3-204ENST00000566200 IP6K1Q92551 441 aa26.55■■□□□ 1.84
ABCA3-204ENST00000566200 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
ABCA3-204ENST00000566200 PAPPAQ13219 1627 aa26.54■■□□□ 1.84
ABCA3-204ENST00000566200 RGPD2P0DJD1 1756 aa26.53■■□□□ 1.84
ABCA3-204ENST00000566200 FBLN1P23142 703 aa26.52■■□□□ 1.84
ABCA3-204ENST00000566200 PPP1R1BQ9UD71 204 aaPredicted RBP26.52■■□□□ 1.84
ABCA3-204ENST00000566200 MYOM1P52179 1685 aa26.51■■□□□ 1.83
ABCA3-204ENST00000566200 ANKRD36BQ8N2N9 1353 aa26.51■■□□□ 1.83
ABCA3-204ENST00000566200 MAP3K19Q56UN5 1328 aa26.51■■□□□ 1.83
ABCA3-204ENST00000566200 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
ABCA3-204ENST00000566200 ZBTB7AO95365 584 aa26.49■■□□□ 1.83
ABCA3-204ENST00000566200 LTV1Q96GA3 475 aaPredicted RBP26.49■■□□□ 1.83
ABCA3-204ENST00000566200 COG3Q96JB2 828 aa26.49■■□□□ 1.83
ABCA3-204ENST00000566200 SHANK3Q9BYB0 1731 aa26.48■■□□□ 1.83
ABCA3-204ENST00000566200 TRIM26Q12899 539 aaPredicted RBP26.48■■□□□ 1.83
ABCA3-204ENST00000566200 STK32BQ9NY57 414 aa26.48■■□□□ 1.83
ABCA3-204ENST00000566200 USP47Q96K76 1375 aa26.47■■□□□ 1.83
ABCA3-204ENST00000566200 HOXC9P31274 260 aa26.47■■□□□ 1.83
ABCA3-204ENST00000566200 PTGER2P43116 358 aa26.47■■□□□ 1.83
ABCA3-204ENST00000566200 SLC24A1O60721 1099 aa26.46■■□□□ 1.83
ABCA3-204ENST00000566200 KAT6BQ8WYB5 2073 aa26.43■■□□□ 1.82
ABCA3-204ENST00000566200 ATF5Q9Y2D1 282 aaPredicted RBP26.43■■□□□ 1.82
ABCA3-204ENST00000566200 DOT1LQ8TEK3 1739 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 FYB1O15117 783 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 AMPHP49418 695 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 TMF1P82094 1093 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 DDX54Q8TDD1 881 aaKnown RBP26.42■■□□□ 1.82
ABCA3-204ENST00000566200 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 MEGF6O75095 1541 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
ABCA3-204ENST00000566200 RRS1Q15050 365 aaKnown RBP26.4■■□□□ 1.82
ABCA3-204ENST00000566200 SGIP1Q9BQI5 828 aa26.4■■□□□ 1.82
ABCA3-204ENST00000566200 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
ABCA3-204ENST00000566200 RTL1A6NKG5 1358 aa26.4■■□□□ 1.82
ABCA3-204ENST00000566200 ZNF827Q17R98 1081 aa26.39■■□□□ 1.82
ABCA3-204ENST00000566200 MTFR1LQ9H019 292 aa26.37■■□□□ 1.81
ABCA3-204ENST00000566200 LY75O60449 1722 aa26.36■■□□□ 1.81
ABCA3-204ENST00000566200 NSD2O96028 1365 aa26.36■■□□□ 1.81
ABCA3-204ENST00000566200 QSER1Q2KHR3 1735 aa26.36■■□□□ 1.81
ABCA3-204ENST00000566200 YY1P25490 414 aa26.35■■□□□ 1.81
ABCA3-204ENST00000566200 NBPF6Q5VWK0 638 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms