RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
TNRC6A-211ENST00000566108 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
TNRC6A-211ENST00000566108 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
TNRC6A-211ENST00000566108 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
TNRC6A-211ENST00000566108 ARHGEF25Q86VW2 580 aa18.13■□□□□ 0.49
TNRC6A-211ENST00000566108 CDCA7Q9BWT1 371 aaPredicted RBP18.13■□□□□ 0.49
TNRC6A-211ENST00000566108 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
TNRC6A-211ENST00000566108 ABCC6O95255 1503 aa18.13■□□□□ 0.49
TNRC6A-211ENST00000566108 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
TNRC6A-211ENST00000566108 NPM3O75607 178 aaKnown RBP18.12■□□□□ 0.49
TNRC6A-211ENST00000566108 TRIM37O94972 964 aa18.12■□□□□ 0.49
TNRC6A-211ENST00000566108 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
TNRC6A-211ENST00000566108 EN1Q05925 392 aaPredicted RBP18.11■□□□□ 0.49
TNRC6A-211ENST00000566108 DDB1Q16531 1140 aa18.11■□□□□ 0.49
TNRC6A-211ENST00000566108 SLC12A5Q9H2X9 1139 aa18.11■□□□□ 0.49
TNRC6A-211ENST00000566108 USP31Q70CQ4 1352 aa18.11■□□□□ 0.49
TNRC6A-211ENST00000566108 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
TNRC6A-211ENST00000566108 COL18A1P39060 1754 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 APBA3O96018 575 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 TMF1P82094 1093 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
TNRC6A-211ENST00000566108 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 NFAT5O94916 1531 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 OVOS2A0A0G2JMS6 1433 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 OVOS2A0A0J9YW53 1432 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 OVOS2Q6IE36 1432 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 A0A1W2PP64 1363 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 USP47Q96K76 1375 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 NME9Q86XW9 330 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 PCGF6Q9BYE7 350 aa18.09■□□□□ 0.49
TNRC6A-211ENST00000566108 CD163L1Q9NR16 1453 aa18.08■□□□□ 0.49
TNRC6A-211ENST00000566108 CCDC7Q96M83 1385 aa18.08■□□□□ 0.49
TNRC6A-211ENST00000566108 RGPD5Q99666 1765 aa18.08■□□□□ 0.48
TNRC6A-211ENST00000566108 TESK2Q96S53 571 aa18.07■□□□□ 0.48
TNRC6A-211ENST00000566108 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
TNRC6A-211ENST00000566108 AXIN2Q9Y2T1 843 aa18.07■□□□□ 0.48
TNRC6A-211ENST00000566108 WNK3Q9BYP7 1800 aa18.07■□□□□ 0.48
TNRC6A-211ENST00000566108 LTN1O94822 1766 aa18.07■□□□□ 0.48
TNRC6A-211ENST00000566108 LRRC37A3O60309 1634 aa18.06■□□□□ 0.48
TNRC6A-211ENST00000566108 COG3Q96JB2 828 aa18.05■□□□□ 0.48
TNRC6A-211ENST00000566108 EZH2Q15910 746 aaKnown RBP18.04■□□□□ 0.48
TNRC6A-211ENST00000566108 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
TNRC6A-211ENST00000566108 EXOC5O00471 708 aa18.03■□□□□ 0.48
TNRC6A-211ENST00000566108 NBPF14Q5TI25 921 aa18.03■□□□□ 0.48
TNRC6A-211ENST00000566108 NLRP2Q9NX02 1062 aa18.03■□□□□ 0.48
TNRC6A-211ENST00000566108 ANKRD36BQ8N2N9 1353 aa18.03■□□□□ 0.48
TNRC6A-211ENST00000566108 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
TNRC6A-211ENST00000566108 ERBB3P21860 1342 aa18.01■□□□□ 0.47
TNRC6A-211ENST00000566108 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
TNRC6A-211ENST00000566108 LRP5O75197 1615 aa17.99■□□□□ 0.47
TNRC6A-211ENST00000566108 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
TNRC6A-211ENST00000566108 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
TNRC6A-211ENST00000566108 BCL11BQ9C0K0 894 aaPredicted RBP17.98■□□□□ 0.47
TNRC6A-211ENST00000566108 FAM208AQ9UK61 1670 aaKnown RBP17.98■□□□□ 0.47
TNRC6A-211ENST00000566108 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
TNRC6A-211ENST00000566108 RREB1Q92766 1687 aa17.97■□□□□ 0.47
TNRC6A-211ENST00000566108 IL2RBP14784 551 aa17.97■□□□□ 0.47
TNRC6A-211ENST00000566108 AMPHP49418 695 aa17.97■□□□□ 0.47
TNRC6A-211ENST00000566108 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
TNRC6A-211ENST00000566108 SBF2Q86WG5 1849 aa17.97■□□□□ 0.47
TNRC6A-211ENST00000566108 IP6K1Q92551 441 aa17.96■□□□□ 0.47
TNRC6A-211ENST00000566108 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
TNRC6A-211ENST00000566108 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
TNRC6A-211ENST00000566108 SRCAPQ6ZRS2 3230 aa17.96■□□□□ 0.47
TNRC6A-211ENST00000566108 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
TNRC6A-211ENST00000566108 BCL9O00512 1426 aa17.95■□□□□ 0.46
TNRC6A-211ENST00000566108 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
TNRC6A-211ENST00000566108 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
TNRC6A-211ENST00000566108 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
TNRC6A-211ENST00000566108 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
TNRC6A-211ENST00000566108 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
TNRC6A-211ENST00000566108 PLSCR1O15162 318 aa17.93■□□□□ 0.46
TNRC6A-211ENST00000566108 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
TNRC6A-211ENST00000566108 RTL1A6NKG5 1358 aa17.92■□□□□ 0.46
TNRC6A-211ENST00000566108 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
TNRC6A-211ENST00000566108 HOXC9P31274 260 aa17.9■□□□□ 0.46
TNRC6A-211ENST00000566108 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
TNRC6A-211ENST00000566108 FYB1O15117 783 aa17.89■□□□□ 0.45
TNRC6A-211ENST00000566108 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
TNRC6A-211ENST00000566108 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
TNRC6A-211ENST00000566108 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
TNRC6A-211ENST00000566108 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
TNRC6A-211ENST00000566108 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
TNRC6A-211ENST00000566108 RRS1Q15050 365 aaKnown RBP17.86■□□□□ 0.45
TNRC6A-211ENST00000566108 MYOM1P52179 1685 aa17.86■□□□□ 0.45
TNRC6A-211ENST00000566108 CGNL1Q0VF96 1302 aa17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 DDX54Q8TDD1 881 aaKnown RBP17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 ACSBG1Q96GR2 724 aa17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 PPP1R1BQ9UD71 204 aaPredicted RBP17.85■□□□□ 0.45
TNRC6A-211ENST00000566108 FLT4P35916 1363 aa17.84■□□□□ 0.45
TNRC6A-211ENST00000566108 RAPGEF4Q8WZA2 1011 aa17.83■□□□□ 0.44
TNRC6A-211ENST00000566108 SPON1Q9HCB6 807 aa17.83■□□□□ 0.44
TNRC6A-211ENST00000566108 FBLN1P23142 703 aa17.82■□□□□ 0.44
TNRC6A-211ENST00000566108 TXNRD1Q16881 649 aa17.82■□□□□ 0.44
TNRC6A-211ENST00000566108 INSRP06213 1382 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms