RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
TNRC6A-211ENST00000566108 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
TNRC6A-211ENST00000566108 ABCC9O60706 1549 aa28.23■■■□□ 2.11
TNRC6A-211ENST00000566108 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
TNRC6A-211ENST00000566108 NACADO15069 1562 aa26.89■■□□□ 1.9
TNRC6A-211ENST00000566108 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
TNRC6A-211ENST00000566108 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
TNRC6A-211ENST00000566108 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
TNRC6A-211ENST00000566108 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
TNRC6A-211ENST00000566108 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
TNRC6A-211ENST00000566108 DCAF1Q9Y4B6 1507 aa26.3■■□□□ 1.8
TNRC6A-211ENST00000566108 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
TNRC6A-211ENST00000566108 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
TNRC6A-211ENST00000566108 DNAJC5BQ9UF47 199 aa26.12■■□□□ 1.77
TNRC6A-211ENST00000566108 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
TNRC6A-211ENST00000566108 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
TNRC6A-211ENST00000566108 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
TNRC6A-211ENST00000566108 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
TNRC6A-211ENST00000566108 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
TNRC6A-211ENST00000566108 CECR2Q9BXF3 1484 aa25.44■■□□□ 1.66
TNRC6A-211ENST00000566108 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
TNRC6A-211ENST00000566108 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
TNRC6A-211ENST00000566108 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
TNRC6A-211ENST00000566108 BAZ1AQ9NRL2 1556 aaPredicted RBP24.73■■□□□ 1.55
TNRC6A-211ENST00000566108 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.55
TNRC6A-211ENST00000566108 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
TNRC6A-211ENST00000566108 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
TNRC6A-211ENST00000566108 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
TNRC6A-211ENST00000566108 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
TNRC6A-211ENST00000566108 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
TNRC6A-211ENST00000566108 CUX2O14529 1486 aa24.31■■□□□ 1.48
TNRC6A-211ENST00000566108 NESP48681 1621 aa24.26■■□□□ 1.47
TNRC6A-211ENST00000566108 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
TNRC6A-211ENST00000566108 WIZO95785 1651 aa24.2■■□□□ 1.46
TNRC6A-211ENST00000566108 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
TNRC6A-211ENST00000566108 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
TNRC6A-211ENST00000566108 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
TNRC6A-211ENST00000566108 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
TNRC6A-211ENST00000566108 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
TNRC6A-211ENST00000566108 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
TNRC6A-211ENST00000566108 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
TNRC6A-211ENST00000566108 MRC2Q9UBG0 1479 aa23.86■■□□□ 1.41
TNRC6A-211ENST00000566108 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
TNRC6A-211ENST00000566108 CFTRP13569 1480 aa23.8■■□□□ 1.4
TNRC6A-211ENST00000566108 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
TNRC6A-211ENST00000566108 WDR62O43379 1518 aa23.76■■□□□ 1.39
TNRC6A-211ENST00000566108 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
TNRC6A-211ENST00000566108 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
TNRC6A-211ENST00000566108 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
TNRC6A-211ENST00000566108 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
TNRC6A-211ENST00000566108 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
TNRC6A-211ENST00000566108 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
TNRC6A-211ENST00000566108 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
TNRC6A-211ENST00000566108 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
TNRC6A-211ENST00000566108 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
TNRC6A-211ENST00000566108 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
TNRC6A-211ENST00000566108 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
TNRC6A-211ENST00000566108 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.29
TNRC6A-211ENST00000566108 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
TNRC6A-211ENST00000566108 TARBP1Q13395 1621 aaKnown RBP23.08■■□□□ 1.29
TNRC6A-211ENST00000566108 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
TNRC6A-211ENST00000566108 SOGA1O94964 1423 aa23.03■■□□□ 1.28
TNRC6A-211ENST00000566108 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.281e-13■■■■■ 72.1
TNRC6A-211ENST00000566108 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
TNRC6A-211ENST00000566108 WDR97A6NE52 1622 aa22.99■■□□□ 1.27
TNRC6A-211ENST00000566108 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
TNRC6A-211ENST00000566108 CUX1P39880 1505 aa22.98■■□□□ 1.27
TNRC6A-211ENST00000566108 FBLN2P98095 1184 aa22.93■■□□□ 1.26
TNRC6A-211ENST00000566108 CHD1O14646 1710 aa22.93■■□□□ 1.26
TNRC6A-211ENST00000566108 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
TNRC6A-211ENST00000566108 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
TNRC6A-211ENST00000566108 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
TNRC6A-211ENST00000566108 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
TNRC6A-211ENST00000566108 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
TNRC6A-211ENST00000566108 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
TNRC6A-211ENST00000566108 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.25
TNRC6A-211ENST00000566108 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
TNRC6A-211ENST00000566108 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
TNRC6A-211ENST00000566108 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.24
TNRC6A-211ENST00000566108 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
TNRC6A-211ENST00000566108 PBRM1Q86U86 1689 aa22.77■■□□□ 1.24
TNRC6A-211ENST00000566108 ABCA10Q8WWZ4 1543 aa22.77■■□□□ 1.24
TNRC6A-211ENST00000566108 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
TNRC6A-211ENST00000566108 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
TNRC6A-211ENST00000566108 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
TNRC6A-211ENST00000566108 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
TNRC6A-211ENST00000566108 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
TNRC6A-211ENST00000566108 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
TNRC6A-211ENST00000566108 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
TNRC6A-211ENST00000566108 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
TNRC6A-211ENST00000566108 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
TNRC6A-211ENST00000566108 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
TNRC6A-211ENST00000566108 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
TNRC6A-211ENST00000566108 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.19
TNRC6A-211ENST00000566108 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
TNRC6A-211ENST00000566108 NUP160Q12769 1436 aa22.4■■□□□ 1.18
TNRC6A-211ENST00000566108 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
TNRC6A-211ENST00000566108 CEP170Q5SW79 1584 aa22.39■■□□□ 1.18
TNRC6A-211ENST00000566108 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
TNRC6A-211ENST00000566108 SHROOM2Q13796 1616 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms