RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DDB1Q16531 1140 aa18.54■□□□□ 0.56
RNF40-208ENST00000565995 CABP2Q9NPB3 220 aa18.54■□□□□ 0.56
RNF40-208ENST00000565995 NLRP6P59044 892 aa18.53■□□□□ 0.56
RNF40-208ENST00000565995 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
RNF40-208ENST00000565995 PPP1R1BQ9UD71 204 aaPredicted RBP18.53■□□□□ 0.56
RNF40-208ENST00000565995 MYOM1P52179 1685 aa18.53■□□□□ 0.56
RNF40-208ENST00000565995 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
RNF40-208ENST00000565995 WDR17Q8IZU2 1322 aa18.52■□□□□ 0.56
RNF40-208ENST00000565995 UTRNP46939 3433 aa18.52■□□□□ 0.56
RNF40-208ENST00000565995 PROM2Q8N271 834 aa18.52■□□□□ 0.56
RNF40-208ENST00000565995 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
RNF40-208ENST00000565995 USP54Q70EL1 1684 aa18.51■□□□□ 0.55
RNF40-208ENST00000565995 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
RNF40-208ENST00000565995 ABCC6O95255 1503 aa18.5■□□□□ 0.55
RNF40-208ENST00000565995 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
RNF40-208ENST00000565995 MARCH10Q8NA82 808 aaPredicted RBP18.5■□□□□ 0.55
RNF40-208ENST00000565995 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
RNF40-208ENST00000565995 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
RNF40-208ENST00000565995 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
RNF40-208ENST00000565995 PTF1AQ7RTS3 328 aa18.49■□□□□ 0.55
RNF40-208ENST00000565995 ARHGEF25Q86VW2 580 aa18.49■□□□□ 0.55
RNF40-208ENST00000565995 ANO8Q9HCE9 1232 aaPredicted RBP18.49■□□□□ 0.55
RNF40-208ENST00000565995 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
RNF40-208ENST00000565995 LTN1O94822 1766 aa18.48■□□□□ 0.55
RNF40-208ENST00000565995 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
RNF40-208ENST00000565995 CARD10Q9BWT7 1032 aa18.47■□□□□ 0.55
RNF40-208ENST00000565995 NFAT5O94916 1531 aa18.47■□□□□ 0.55
RNF40-208ENST00000565995 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
RNF40-208ENST00000565995 PTGER2P43116 358 aa18.46■□□□□ 0.55
RNF40-208ENST00000565995 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
RNF40-208ENST00000565995 BTAF1O14981 1849 aa18.46■□□□□ 0.55
RNF40-208ENST00000565995 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
RNF40-208ENST00000565995 PDGFDQ9GZP0 370 aaPredicted RBP18.45■□□□□ 0.54
RNF40-208ENST00000565995 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
RNF40-208ENST00000565995 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
RNF40-208ENST00000565995 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
RNF40-208ENST00000565995 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
RNF40-208ENST00000565995 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
RNF40-208ENST00000565995 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
RNF40-208ENST00000565995 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
RNF40-208ENST00000565995 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
RNF40-208ENST00000565995 EXOC5O00471 708 aa18.41■□□□□ 0.54
RNF40-208ENST00000565995 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
RNF40-208ENST00000565995 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
RNF40-208ENST00000565995 ZBTB7AO95365 584 aa18.39■□□□□ 0.53
RNF40-208ENST00000565995 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
RNF40-208ENST00000565995 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
RNF40-208ENST00000565995 SYT17Q9BSW7 474 aa18.37■□□□□ 0.53
RNF40-208ENST00000565995 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
RNF40-208ENST00000565995 USP31Q70CQ4 1352 aa18.37■□□□□ 0.53
RNF40-208ENST00000565995 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
RNF40-208ENST00000565995 TUBGCP6Q96RT7 1819 aa18.36■□□□□ 0.53
RNF40-208ENST00000565995 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
RNF40-208ENST00000565995 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
RNF40-208ENST00000565995 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
RNF40-208ENST00000565995 CSB-PGBD3P0DP91 1061 aa18.35■□□□□ 0.53
RNF40-208ENST00000565995 ZNF784Q8NCA9 323 aaPredicted RBP18.34■□□□□ 0.53
RNF40-208ENST00000565995 FHDC1Q9C0D6 1143 aaPredicted RBP18.34■□□□□ 0.53
RNF40-208ENST00000565995 LY75O60449 1722 aa18.34■□□□□ 0.53
RNF40-208ENST00000565995 SBNO2Q9Y2G9 1366 aa18.32■□□□□ 0.52
RNF40-208ENST00000565995 ERBB3P21860 1342 aa18.32■□□□□ 0.52
RNF40-208ENST00000565995 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
RNF40-208ENST00000565995 GOLGB1Q14789 3259 aaKnown RBP18.31■□□□□ 0.52
RNF40-208ENST00000565995 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
RNF40-208ENST00000565995 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
RNF40-208ENST00000565995 SHANK3Q9BYB0 1731 aa18.29■□□□□ 0.52
RNF40-208ENST00000565995 SOX12O15370 315 aa18.29■□□□□ 0.52
RNF40-208ENST00000565995 IL2RBP14784 551 aa18.29■□□□□ 0.52
RNF40-208ENST00000565995 ARXQ96QS3 562 aa18.28■□□□□ 0.52
RNF40-208ENST00000565995 ACSBG1Q96GR2 724 aa18.27■□□□□ 0.52
RNF40-208ENST00000565995 SLC16A10Q8TF71 515 aa18.26■□□□□ 0.51
RNF40-208ENST00000565995 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
RNF40-208ENST00000565995 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
RNF40-208ENST00000565995 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
RNF40-208ENST00000565995 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
RNF40-208ENST00000565995 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
RNF40-208ENST00000565995 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
RNF40-208ENST00000565995 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
RNF40-208ENST00000565995 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
RNF40-208ENST00000565995 NME9Q86XW9 330 aa18.23■□□□□ 0.51
RNF40-208ENST00000565995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
RNF40-208ENST00000565995 ANKRD24Q8TF21 1146 aa18.23■□□□□ 0.51
RNF40-208ENST00000565995 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
RNF40-208ENST00000565995 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
RNF40-208ENST00000565995 C1QTNF8P60827 252 aa18.2■□□□□ 0.5
RNF40-208ENST00000565995 IP6K1Q92551 441 aa18.2■□□□□ 0.5
RNF40-208ENST00000565995 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
RNF40-208ENST00000565995 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
RNF40-208ENST00000565995 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
RNF40-208ENST00000565995 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
RNF40-208ENST00000565995 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
RNF40-208ENST00000565995 C5P01031 1676 aa18.16■□□□□ 0.5
RNF40-208ENST00000565995 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
RNF40-208ENST00000565995 TERF2IPQ9NYB0 399 aa18.16■□□□□ 0.5
RNF40-208ENST00000565995 ITGB4P16144 1822 aa18.16■□□□□ 0.5
RNF40-208ENST00000565995 POLD1P28340 1107 aa18.15■□□□□ 0.5
RNF40-208ENST00000565995 GPR162Q16538 588 aa18.15■□□□□ 0.5
RNF40-208ENST00000565995 NSD2O96028 1365 aa18.15■□□□□ 0.5
RNF40-208ENST00000565995 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
RNF40-208ENST00000565995 TMC1Q8TDI8 760 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms