RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 HSP90AB2PQ58FF8 381 aa32.86■■■□□ 2.85
LINC01003-201ENST00000564834 ORAI2Q96SN7 254 aa32.86■■■□□ 2.85
LINC01003-201ENST00000564834 IL16Q14005 1332 aa32.85■■■□□ 2.85
LINC01003-201ENST00000564834 NFE2L2Q16236 605 aa32.83■■■□□ 2.85
LINC01003-201ENST00000564834 DLG5Q8TDM6 1919 aa32.82■■■□□ 2.84
LINC01003-201ENST00000564834 PLIN1O60240 522 aa32.82■■■□□ 2.84
LINC01003-201ENST00000564834 NUTM2GQ5VZR2 741 aa32.82■■■□□ 2.84
LINC01003-201ENST00000564834 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.82■■■□□ 2.84
LINC01003-201ENST00000564834 PHACTR3Q96KR7 559 aa32.82■■■□□ 2.84
LINC01003-201ENST00000564834 TRPM3Q9HCF6 1732 aaPredicted RBP32.81■■■□□ 2.84
LINC01003-201ENST00000564834 AMPHP49418 695 aa32.81■■■□□ 2.84
LINC01003-201ENST00000564834 B4GALNT3Q6L9W6 998 aa32.81■■■□□ 2.84
LINC01003-201ENST00000564834 MST1RQ04912 1400 aa32.8■■■□□ 2.84
LINC01003-201ENST00000564834 LTN1O94822 1766 aa32.8■■■□□ 2.84
LINC01003-201ENST00000564834 ATF3P18847 181 aa32.79■■■□□ 2.84
LINC01003-201ENST00000564834 ARHGEF10O15013 1369 aa32.78■■■□□ 2.84
LINC01003-201ENST00000564834 FOXO3O43524 673 aa32.78■■■□□ 2.84
LINC01003-201ENST00000564834 XIRP1Q702N8 1843 aaKnown RBP32.77■■■□□ 2.84
LINC01003-201ENST00000564834 NFAT5O94916 1531 aa32.77■■■□□ 2.84
LINC01003-201ENST00000564834 EXOC6Q8TAG9 804 aa32.76■■■□□ 2.84
LINC01003-201ENST00000564834 RTL1A6NKG5 1358 aa32.76■■■□□ 2.83
LINC01003-201ENST00000564834 SULT6B1Q6IMI4 303 aa32.75■■■□□ 2.83
LINC01003-201ENST00000564834 FANCIQ9NVI1 1328 aa32.74■■■□□ 2.83
LINC01003-201ENST00000564834 HOXC9P31274 260 aa32.73■■■□□ 2.83
LINC01003-201ENST00000564834 CADPS2Q86UW7 1296 aa32.73■■■□□ 2.83
LINC01003-201ENST00000564834 AEBP1Q8IUX7 1158 aa32.73■■■□□ 2.83
LINC01003-201ENST00000564834 CCDC136Q96JN2 1154 aa32.73■■■□□ 2.83
LINC01003-201ENST00000564834 PHRF1Q9P1Y6 1649 aaKnown RBP32.72■■■□□ 2.83
LINC01003-201ENST00000564834 CT47B1P0C2W7 299 aaPredicted RBP32.72■■■□□ 2.83
LINC01003-201ENST00000564834 MSH6P52701 1360 aa32.72■■■□□ 2.83
LINC01003-201ENST00000564834 LMOD3Q0VAK6 560 aa32.71■■■□□ 2.83
LINC01003-201ENST00000564834 KCNH5Q8NCM2 988 aa32.71■■■□□ 2.83
LINC01003-201ENST00000564834 BCAR3O75815 825 aa32.7■■■□□ 2.83
LINC01003-201ENST00000564834 CALD1Q05682 793 aaKnown RBP32.7■■■□□ 2.82
LINC01003-201ENST00000564834 KDRP35968 1356 aa32.7■■■□□ 2.82
LINC01003-201ENST00000564834 SLIT3O75094 1523 aa32.69■■■□□ 2.82
LINC01003-201ENST00000564834 IGSF1Q8N6C5 1336 aa32.69■■■□□ 2.82
LINC01003-201ENST00000564834 KRT28Q7Z3Y7 464 aa32.68■■■□□ 2.82
LINC01003-201ENST00000564834 RARSP54136 660 aaKnown RBP32.68■■■□□ 2.82
LINC01003-201ENST00000564834 C20orf194Q5TEA3 1177 aa32.68■■■□□ 2.82
LINC01003-201ENST00000564834 TSR2Q969E8 191 aaKnown RBP32.68■■■□□ 2.82
LINC01003-201ENST00000564834 CRBNQ96SW2 442 aa32.68■■■□□ 2.82
LINC01003-201ENST00000564834 ALS2Q96Q42 1657 aa32.68■■■□□ 2.82
LINC01003-201ENST00000564834 XPCQ01831 940 aaPredicted RBP32.67■■■□□ 2.82
LINC01003-201ENST00000564834 EYA1Q99502 592 aa32.64■■■□□ 2.82
LINC01003-201ENST00000564834 USP19O94966 1318 aa32.62■■■□□ 2.81
LINC01003-201ENST00000564834 IP6K1Q92551 441 aa32.62■■■□□ 2.81
LINC01003-201ENST00000564834 EXOSC9Q06265 439 aaKnown RBP32.61■■■□□ 2.81
LINC01003-201ENST00000564834 IFT57Q9NWB7 429 aa32.6■■■□□ 2.81
LINC01003-201ENST00000564834 ZNF335Q9H4Z2 1342 aaPredicted RBP32.58■■■□□ 2.81
LINC01003-201ENST00000564834 GCP02774 474 aa32.58■■■□□ 2.81
LINC01003-201ENST00000564834 PDE3AQ14432 1141 aa32.58■■■□□ 2.81
LINC01003-201ENST00000564834 NPHP3Q7Z494 1330 aa32.58■■■□□ 2.81
LINC01003-201ENST00000564834 GNAI1P63096 354 aa32.58■■■□□ 2.81
LINC01003-201ENST00000564834 THUMPD2Q9BTF0 503 aaKnown RBP32.58■■■□□ 2.81
LINC01003-201ENST00000564834 ZNF853P0CG23 659 aa32.56■■■□□ 2.8
LINC01003-201ENST00000564834 LMOD2Q6P5Q4 547 aa32.56■■■□□ 2.8
LINC01003-201ENST00000564834 CANXP27824 592 aaKnown RBP32.55■■■□□ 2.8
LINC01003-201ENST00000564834 ARHGEF25Q86VW2 580 aa32.53■■■□□ 2.8
LINC01003-201ENST00000564834 CFAP44Q96MT7 982 aa32.53■■■□□ 2.8
LINC01003-201ENST00000564834 FAM83GA6ND36 823 aa32.53■■■□□ 2.8
LINC01003-201ENST00000564834 LAS1LQ9Y4W2 734 aaKnown RBP32.53■■■□□ 2.8
LINC01003-201ENST00000564834 PXDNQ92626 1479 aa32.51■■■□□ 2.8
LINC01003-201ENST00000564834 MED1Q15648 1581 aaPredicted RBP32.51■■■□□ 2.79
LINC01003-201ENST00000564834 LTV1Q96GA3 475 aaPredicted RBP32.5■■■□□ 2.79
LINC01003-201ENST00000564834 FRAT1Q92837 279 aaPredicted RBP32.5■■■□□ 2.79
LINC01003-201ENST00000564834 BCL2L13Q9BXK5 485 aa32.5■■■□□ 2.79
LINC01003-201ENST00000564834 GAS2L2Q8NHY3 880 aa32.49■■■□□ 2.79
LINC01003-201ENST00000564834 ZNF428Q96B54 188 aa32.49■■■□□ 2.79
LINC01003-201ENST00000564834 TNS3Q68CZ2 1445 aa32.49■■■□□ 2.79
LINC01003-201ENST00000564834 DCTN1Q14203 1278 aa32.48■■■□□ 2.79
LINC01003-201ENST00000564834 MTHFSDQ2M296 383 aaKnown RBP32.48■■■□□ 2.79
LINC01003-201ENST00000564834 DDX17Q92841 729 aaKnown RBP32.47■■■□□ 2.79
LINC01003-201ENST00000564834 MBIPQ9NS73 344 aa32.47■■■□□ 2.79
LINC01003-201ENST00000564834 RGPD2P0DJD1 1756 aa32.47■■■□□ 2.79
LINC01003-201ENST00000564834 TSHZ2Q9NRE2 1034 aa32.46■■■□□ 2.79
LINC01003-201ENST00000564834 SMC4Q9NTJ3 1288 aa32.46■■■□□ 2.79
LINC01003-201ENST00000564834 ZBTB7CA1YPR0 619 aa32.45■■■□□ 2.78
LINC01003-201ENST00000564834 BRINP3Q76B58 766 aa32.45■■■□□ 2.78
LINC01003-201ENST00000564834 SSH1Q8WYL5 1049 aa32.45■■■□□ 2.78
LINC01003-201ENST00000564834 ALDH1L2Q3SY69 923 aa32.44■■■□□ 2.78
LINC01003-201ENST00000564834 CRYBG1Q9Y4K1 1723 aa32.43■■■□□ 2.78
LINC01003-201ENST00000564834 MCM10Q7L590 875 aa32.42■■■□□ 2.78
LINC01003-201ENST00000564834 CAMTA1Q9Y6Y1 1673 aa32.41■■■□□ 2.78
LINC01003-201ENST00000564834 ZKSCAN2Q63HK3 967 aa32.41■■■□□ 2.78
LINC01003-201ENST00000564834 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
LINC01003-201ENST00000564834 PANK1Q8TE04 598 aa32.41■■■□□ 2.78
LINC01003-201ENST00000564834 RTF1Q92541 710 aaKnown RBP32.41■■■□□ 2.78
LINC01003-201ENST00000564834 RGPD5Q99666 1765 aa32.41■■■□□ 2.78
LINC01003-201ENST00000564834 SPATA31A3Q5VYP0 1347 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 HTATSF1O43719 755 aaKnown RBP32.4■■■□□ 2.78
LINC01003-201ENST00000564834 NBPF6Q5VWK0 638 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 NBPF4Q96M43 638 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 CRB1P82279 1406 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 NCAPD2Q15021 1401 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 PLEKHG5O94827 1062 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 SLAIN2Q9P270 581 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 LRRC37A3O60309 1634 aa32.4■■■□□ 2.78
LINC01003-201ENST00000564834 KIF16BQ96L93 1317 aa32.38■■■□□ 2.77
LINC01003-201ENST00000564834 MS4A1P11836 297 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms