RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 PSEN2P49810 448 aa9.17□□□□□ -0.94
TCF4-220ENST00000563824 HDGFP51858 240 aaKnown RBP9.17□□□□□ -0.94
TCF4-220ENST00000563824 SWT1Q5T5J6 900 aaKnown RBP9.17□□□□□ -0.94
TCF4-220ENST00000563824 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
TCF4-220ENST00000563824 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
TCF4-220ENST00000563824 ZBTB3Q9H5J0 574 aa9.17□□□□□ -0.94
TCF4-220ENST00000563824 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 HOXA2O43364 376 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 CABLES1Q8TDN4 633 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
TCF4-220ENST00000563824 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 ABCA6Q8N139 1617 aa9.16□□□□□ -0.94
TCF4-220ENST00000563824 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 FDX1P10109 184 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 GCGRP47871 477 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
TCF4-220ENST00000563824 GDPD2Q9HCC8 539 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.94
TCF4-220ENST00000563824 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 SERPINA10Q9UK55 444 aa9.15□□□□□ -0.94
TCF4-220ENST00000563824 ARHGAP33O14559 1287 aa9.14□□□□□ -0.95
TCF4-220ENST00000563824 RNF40O75150 1001 aa9.14□□□□□ -0.95
TCF4-220ENST00000563824 ABL2P42684 1182 aa9.14□□□□□ -0.95
TCF4-220ENST00000563824 RTL5Q5HYW3 569 aaPredicted RBP9.14□□□□□ -0.95
TCF4-220ENST00000563824 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
TCF4-220ENST00000563824 A2ML1A8K2U0 1454 aa9.14□□□□□ -0.95
TCF4-220ENST00000563824 POLR1AO95602 1720 aaPredicted RBP9.14□□□□□ -0.95
TCF4-220ENST00000563824 TSC1Q92574 1164 aa9.13□□□□□ -0.95
TCF4-220ENST00000563824 ARHGAP5Q13017 1502 aa9.13□□□□□ -0.95
TCF4-220ENST00000563824 HRCP23327 699 aa9.12□□□□□ -0.95
TCF4-220ENST00000563824 PODXL2Q9NZ53 605 aa9.12□□□□□ -0.95
TCF4-220ENST00000563824 SLC10A3P09131 477 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 GUCA2AQ02747 115 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
TCF4-220ENST00000563824 GRIPAP1Q4V328 841 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 SLF2Q8IX21 1173 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 HELBQ8NG08 1087 aaPredicted RBP9.11□□□□□ -0.95
TCF4-220ENST00000563824 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 KIF14Q15058 1648 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 ALKQ9UM73 1620 aa9.11□□□□□ -0.95
TCF4-220ENST00000563824 DNMT1P26358 1616 aaKnown RBP9.1□□□□□ -0.95
TCF4-220ENST00000563824 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
TCF4-220ENST00000563824 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
TCF4-220ENST00000563824 MTMR2Q13614 643 aa9.1□□□□□ -0.95
TCF4-220ENST00000563824 ANKLE2Q86XL3 938 aa9.1□□□□□ -0.95
TCF4-220ENST00000563824 CLIP1P30622 1438 aa9.1□□□□□ -0.95
TCF4-220ENST00000563824 KIDINS220Q9ULH0 1771 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 MED14O60244 1454 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 SYNMO15061 1565 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 VWDEQ8N2E2 1590 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 CFHP08603 1231 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 POTEAQ6S8J7 498 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 HLA-CQ95604 372 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 SLC4A5Q9BY07 1137 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 NDUFB9Q9Y6M9 179 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
TCF4-220ENST00000563824 CLTCQ00610 1675 aaKnown RBP9.08□□□□□ -0.96
TCF4-220ENST00000563824 C6orf229H3BNL8 230 aa9.08□□□□□ -0.96
TCF4-220ENST00000563824 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
TCF4-220ENST00000563824 THEMISQ8N1K5 641 aaPredicted RBP9.08□□□□□ -0.96
TCF4-220ENST00000563824 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
TCF4-220ENST00000563824 NEURL4Q96JN8 1562 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 TROQ12816 1431 aaPredicted RBP9.07□□□□□ -0.96
TCF4-220ENST00000563824 ABCC1P33527 1531 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 CDK13Q14004 1512 aaKnown RBP9.07□□□□□ -0.96
TCF4-220ENST00000563824 HRO43593 1189 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 FUT2Q10981 343 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 ITSN2Q9NZM3 1697 aa9.07□□□□□ -0.96
TCF4-220ENST00000563824 NPHP4O75161 1426 aaPredicted RBP9.05□□□□□ -0.96
TCF4-220ENST00000563824 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 CDC42BPBQ9Y5S2 1711 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 TRIM26Q12899 539 aaPredicted RBP9.05□□□□□ -0.96
TCF4-220ENST00000563824 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 FAM135AQ9P2D6 1515 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 FMN1Q68DA7 1419 aa9.05□□□□□ -0.96
TCF4-220ENST00000563824 TK2O00142 265 aa9.04□□□□□ -0.96
TCF4-220ENST00000563824 GLMNQ92990 594 aa9.04□□□□□ -0.96
TCF4-220ENST00000563824 PREX2Q70Z35 1606 aa9.04□□□□□ -0.96
TCF4-220ENST00000563824 PLXNC1O60486 1568 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 POM121CA8CG34 1229 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 ATP6V1AP38606 617 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 NECTIN2Q92692 538 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 SAMD9LQ8IVG5 1584 aa9.03□□□□□ -0.96
TCF4-220ENST00000563824 SPAG9O60271 1321 aaKnown RBP9.03□□□□□ -0.96
TCF4-220ENST00000563824 NLRP1Q9C000 1473 aa9.02□□□□□ -0.96
TCF4-220ENST00000563824 TNRQ92752 1358 aa9.02□□□□□ -0.97
TCF4-220ENST00000563824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.02□□□□□ -0.97
TCF4-220ENST00000563824 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
TCF4-220ENST00000563824 GJD4Q96KN9 370 aaPredicted RBP9.02□□□□□ -0.97
TCF4-220ENST00000563824 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
TCF4-220ENST00000563824 A2MP01023 1474 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms