RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
LINC00838-201ENST00000562956 NFE2L2Q16236 605 aa12.22□□□□□ -0.45
LINC00838-201ENST00000562956 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
LINC00838-201ENST00000562956 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
LINC00838-201ENST00000562956 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
LINC00838-201ENST00000562956 ORAI2Q96SN7 254 aa12.21□□□□□ -0.45
LINC00838-201ENST00000562956 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
LINC00838-201ENST00000562956 RARSP54136 660 aaKnown RBP12.21□□□□□ -0.45
LINC00838-201ENST00000562956 IL16Q14005 1332 aa12.21□□□□□ -0.46
LINC00838-201ENST00000562956 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.46
LINC00838-201ENST00000562956 SBNO1A3KN83 1393 aa12.2□□□□□ -0.46
LINC00838-201ENST00000562956 PSME1Q06323 249 aa12.2□□□□□ -0.46
LINC00838-201ENST00000562956 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
LINC00838-201ENST00000562956 FLT4P35916 1363 aa12.19□□□□□ -0.46
LINC00838-201ENST00000562956 AMPHP49418 695 aa12.19□□□□□ -0.46
LINC00838-201ENST00000562956 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
LINC00838-201ENST00000562956 EXOSC9Q06265 439 aaKnown RBP12.18□□□□□ -0.46
LINC00838-201ENST00000562956 FOXO3O43524 673 aa12.18□□□□□ -0.46
LINC00838-201ENST00000562956 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
LINC00838-201ENST00000562956 C19orf44Q9H6X5 657 aa12.18□□□□□ -0.46
LINC00838-201ENST00000562956 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
LINC00838-201ENST00000562956 XPCQ01831 940 aaPredicted RBP12.17□□□□□ -0.46
LINC00838-201ENST00000562956 TMEM94Q12767 1356 aa12.17□□□□□ -0.46
LINC00838-201ENST00000562956 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
LINC00838-201ENST00000562956 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
LINC00838-201ENST00000562956 HOXC9P31274 260 aa12.16□□□□□ -0.46
LINC00838-201ENST00000562956 RGPD1P0DJD0 1748 aa12.16□□□□□ -0.46
LINC00838-201ENST00000562956 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
LINC00838-201ENST00000562956 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
LINC00838-201ENST00000562956 CANXP27824 592 aaKnown RBP12.16□□□□□ -0.46
LINC00838-201ENST00000562956 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
LINC00838-201ENST00000562956 ARHGEF10O15013 1369 aa12.15□□□□□ -0.46
LINC00838-201ENST00000562956 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
LINC00838-201ENST00000562956 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
LINC00838-201ENST00000562956 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
LINC00838-201ENST00000562956 EYA1Q99502 592 aa12.15□□□□□ -0.46
LINC00838-201ENST00000562956 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.47
LINC00838-201ENST00000562956 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
LINC00838-201ENST00000562956 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
LINC00838-201ENST00000562956 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
LINC00838-201ENST00000562956 TNNQ9UQP3 1299 aa12.14□□□□□ -0.47
LINC00838-201ENST00000562956 KIF24Q5T7B8 1368 aa12.14□□□□□ -0.47
LINC00838-201ENST00000562956 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
LINC00838-201ENST00000562956 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 ATF3P18847 181 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 SSH1Q8WYL5 1049 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 KDRP35968 1356 aa12.13□□□□□ -0.47
LINC00838-201ENST00000562956 NFAT5O94916 1531 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 RLBP1P12271 317 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 KRT28Q7Z3Y7 464 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 MST1RQ04912 1400 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 GNAI1P63096 354 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 LTV1Q96GA3 475 aaPredicted RBP12.12□□□□□ -0.47
LINC00838-201ENST00000562956 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
LINC00838-201ENST00000562956 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 KCNH5Q8NCM2 988 aa12.11□□□□□ -0.47
LINC00838-201ENST00000562956 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
LINC00838-201ENST00000562956 MCM10Q7L590 875 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 IP6K1Q92551 441 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 DCCP43146 1447 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
LINC00838-201ENST00000562956 DLG5Q8TDM6 1919 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 ZBTB7CA1YPR0 619 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 GCP02774 474 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
LINC00838-201ENST00000562956 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
LINC00838-201ENST00000562956 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
LINC00838-201ENST00000562956 KIF1AQ12756 1690 aa12.08□□□□□ -0.47
LINC00838-201ENST00000562956 VAMP4O75379 141 aa12.08□□□□□ -0.48
LINC00838-201ENST00000562956 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
LINC00838-201ENST00000562956 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
LINC00838-201ENST00000562956 USP19O94966 1318 aa12.08□□□□□ -0.48
LINC00838-201ENST00000562956 STRCQ7RTU9 1775 aa12.08□□□□□ -0.48
LINC00838-201ENST00000562956 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
LINC00838-201ENST00000562956 ELL2O00472 640 aaPredicted RBP12.07□□□□□ -0.48
LINC00838-201ENST00000562956 TRIM27P14373 513 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 SLIT3O75094 1523 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 SKAP1Q86WV1 359 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 C8orf58Q8NAV2 365 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 MSH6P52701 1360 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 LTN1O94822 1766 aa12.07□□□□□ -0.48
LINC00838-201ENST00000562956 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
LINC00838-201ENST00000562956 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
LINC00838-201ENST00000562956 ZNF335Q9H4Z2 1342 aaPredicted RBP12.06□□□□□ -0.48
LINC00838-201ENST00000562956 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 GAS2L2Q8NHY3 880 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 CRB1P82279 1406 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms