RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 SOX12O15370 315 aa17.92■□□□□ 0.46
ABCD1P3-201ENST00000562927 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
ABCD1P3-201ENST00000562927 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
ABCD1P3-201ENST00000562927 CD163L1Q9NR16 1453 aa17.91■□□□□ 0.46
ABCD1P3-201ENST00000562927 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
ABCD1P3-201ENST00000562927 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
ABCD1P3-201ENST00000562927 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
ABCD1P3-201ENST00000562927 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 NFAT5O94916 1531 aa17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
ABCD1P3-201ENST00000562927 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
ABCD1P3-201ENST00000562927 SLC12A5Q9H2X9 1139 aa17.89■□□□□ 0.45
ABCD1P3-201ENST00000562927 NBPF14Q5TI25 921 aa17.88■□□□□ 0.45
ABCD1P3-201ENST00000562927 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
ABCD1P3-201ENST00000562927 NME9Q86XW9 330 aa17.88■□□□□ 0.45
ABCD1P3-201ENST00000562927 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
ABCD1P3-201ENST00000562927 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
ABCD1P3-201ENST00000562927 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
ABCD1P3-201ENST00000562927 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
ABCD1P3-201ENST00000562927 PLSCR1O15162 318 aa17.86■□□□□ 0.45
ABCD1P3-201ENST00000562927 BCL11BQ9C0K0 894 aaPredicted RBP17.86■□□□□ 0.45
ABCD1P3-201ENST00000562927 BCL9O00512 1426 aa17.86■□□□□ 0.45
ABCD1P3-201ENST00000562927 ABCC6O95255 1503 aa17.86■□□□□ 0.45
ABCD1P3-201ENST00000562927 EDC4Q6P2E9 1401 aaKnown RBP17.85■□□□□ 0.45
ABCD1P3-201ENST00000562927 MON2Q7Z3U7 1717 aa17.85■□□□□ 0.45
ABCD1P3-201ENST00000562927 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
ABCD1P3-201ENST00000562927 TESK2Q96S53 571 aa17.85■□□□□ 0.45
ABCD1P3-201ENST00000562927 RREB1Q92766 1687 aa17.84■□□□□ 0.45
ABCD1P3-201ENST00000562927 EXOC5O00471 708 aa17.84■□□□□ 0.45
ABCD1P3-201ENST00000562927 PTF1AQ7RTS3 328 aa17.84■□□□□ 0.45
ABCD1P3-201ENST00000562927 A0A1W2PP64 1363 aa17.83■□□□□ 0.45
ABCD1P3-201ENST00000562927 ST20-MTHFSA0A0A6YYL1 179 aa17.83■□□□□ 0.44
ABCD1P3-201ENST00000562927 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
ABCD1P3-201ENST00000562927 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
ABCD1P3-201ENST00000562927 ERBB3P21860 1342 aa17.82■□□□□ 0.44
ABCD1P3-201ENST00000562927 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
ABCD1P3-201ENST00000562927 NUP188Q5SRE5 1749 aa17.81■□□□□ 0.44
ABCD1P3-201ENST00000562927 NINLQ9Y2I6 1382 aa17.8■□□□□ 0.44
ABCD1P3-201ENST00000562927 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
ABCD1P3-201ENST00000562927 PROM2Q8N271 834 aa17.79■□□□□ 0.44
ABCD1P3-201ENST00000562927 ANKRD24Q8TF21 1146 aa17.79■□□□□ 0.44
ABCD1P3-201ENST00000562927 RGPD5Q99666 1765 aa17.78■□□□□ 0.44
ABCD1P3-201ENST00000562927 WNK3Q9BYP7 1800 aa17.77■□□□□ 0.44
ABCD1P3-201ENST00000562927 TNS2Q63HR2 1409 aa17.77■□□□□ 0.44
ABCD1P3-201ENST00000562927 IL2RBP14784 551 aa17.76■□□□□ 0.43
ABCD1P3-201ENST00000562927 IP6K1Q92551 441 aa17.76■□□□□ 0.43
ABCD1P3-201ENST00000562927 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
ABCD1P3-201ENST00000562927 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
ABCD1P3-201ENST00000562927 SPON1Q9HCB6 807 aa17.75■□□□□ 0.43
ABCD1P3-201ENST00000562927 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
ABCD1P3-201ENST00000562927 SBF2Q86WG5 1849 aa17.75■□□□□ 0.43
ABCD1P3-201ENST00000562927 KCNQ2O43526 872 aa17.74■□□□□ 0.43
ABCD1P3-201ENST00000562927 COG3Q96JB2 828 aa17.74■□□□□ 0.43
ABCD1P3-201ENST00000562927 TXNRD1Q16881 649 aa17.73■□□□□ 0.43
ABCD1P3-201ENST00000562927 ANKRD36BQ8N2N9 1353 aa17.72■□□□□ 0.43
ABCD1P3-201ENST00000562927 TMF1P82094 1093 aa17.71■□□□□ 0.43
ABCD1P3-201ENST00000562927 MAP3K19Q56UN5 1328 aa17.71■□□□□ 0.42
ABCD1P3-201ENST00000562927 USP47Q96K76 1375 aa17.7■□□□□ 0.42
ABCD1P3-201ENST00000562927 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
ABCD1P3-201ENST00000562927 LTN1O94822 1766 aa17.7■□□□□ 0.42
ABCD1P3-201ENST00000562927 FBLN1P23142 703 aa17.69■□□□□ 0.42
ABCD1P3-201ENST00000562927 HOXC9P31274 260 aa17.69■□□□□ 0.42
ABCD1P3-201ENST00000562927 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
ABCD1P3-201ENST00000562927 PDGFDQ9GZP0 370 aaPredicted RBP17.69■□□□□ 0.42
ABCD1P3-201ENST00000562927 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
ABCD1P3-201ENST00000562927 FYB1O15117 783 aa17.68■□□□□ 0.42
ABCD1P3-201ENST00000562927 SLC15A2Q16348 729 aa17.68■□□□□ 0.42
ABCD1P3-201ENST00000562927 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
ABCD1P3-201ENST00000562927 AMPHP49418 695 aa17.67■□□□□ 0.42
ABCD1P3-201ENST00000562927 TIMELESSQ9UNS1 1208 aa17.67■□□□□ 0.42
ABCD1P3-201ENST00000562927 CDCA8Q53HL2 280 aa17.66■□□□□ 0.42
ABCD1P3-201ENST00000562927 NHSQ6T4R5 1651 aa17.66■□□□□ 0.42
ABCD1P3-201ENST00000562927 DDX54Q8TDD1 881 aaKnown RBP17.65■□□□□ 0.42
ABCD1P3-201ENST00000562927 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
ABCD1P3-201ENST00000562927 ZBTB7AO95365 584 aa17.64■□□□□ 0.41
ABCD1P3-201ENST00000562927 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
ABCD1P3-201ENST00000562927 RRS1Q15050 365 aaKnown RBP17.63■□□□□ 0.41
ABCD1P3-201ENST00000562927 CASZ1Q86V15 1759 aa17.63■□□□□ 0.41
ABCD1P3-201ENST00000562927 PTGER2P43116 358 aa17.62■□□□□ 0.41
ABCD1P3-201ENST00000562927 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 ZCRB1Q8TBF4 217 aaKnown RBP17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 CARD14Q9BXL6 1004 aa17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 LRRC4BQ9NT99 713 aa17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
ABCD1P3-201ENST00000562927 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
ABCD1P3-201ENST00000562927 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
ABCD1P3-201ENST00000562927 PRIM1P49642 420 aaKnown RBP17.59■□□□□ 0.41
ABCD1P3-201ENST00000562927 CGNL1Q0VF96 1302 aa17.58■□□□□ 0.4
ABCD1P3-201ENST00000562927 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.4
ABCD1P3-201ENST00000562927 MEGF6O75095 1541 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 INSRP06213 1382 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 KIF24Q5T7B8 1368 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 DCAF8L1A6NGE4 600 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 ZNF827Q17R98 1081 aa17.57■□□□□ 0.4
ABCD1P3-201ENST00000562927 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms