RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 THRAP3Q9Y2W1 955 aaKnown RBP23.25■■□□□ 1.31
CDT1-202ENST00000562747 RGPD3A6NKT7 1758 aaPredicted RBP23.24■■□□□ 1.31
CDT1-202ENST00000562747 RGPD4Q7Z3J3 1758 aa23.24■■□□□ 1.31
CDT1-202ENST00000562747 ZBTB7CA1YPR0 619 aa23.23■■□□□ 1.31
CDT1-202ENST00000562747 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
CDT1-202ENST00000562747 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
CDT1-202ENST00000562747 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
CDT1-202ENST00000562747 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
CDT1-202ENST00000562747 TMF1P82094 1093 aa23.21■■□□□ 1.31
CDT1-202ENST00000562747 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
CDT1-202ENST00000562747 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
CDT1-202ENST00000562747 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
CDT1-202ENST00000562747 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
CDT1-202ENST00000562747 NLRP6P59044 892 aa23.2■■□□□ 1.3
CDT1-202ENST00000562747 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
CDT1-202ENST00000562747 TMC1Q8TDI8 760 aa23.17■■□□□ 1.3
CDT1-202ENST00000562747 CDCA8Q53HL2 280 aa23.16■■□□□ 1.3
CDT1-202ENST00000562747 AXIN2Q9Y2T1 843 aa23.16■■□□□ 1.3
CDT1-202ENST00000562747 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
CDT1-202ENST00000562747 MON2Q7Z3U7 1717 aa23.16■■□□□ 1.3
CDT1-202ENST00000562747 KTN1Q86UP2 1357 aaKnown RBP23.15■■□□□ 1.3
CDT1-202ENST00000562747 CASZ1Q86V15 1759 aa23.15■■□□□ 1.3
CDT1-202ENST00000562747 NBPF14Q5TI25 921 aa23.15■■□□□ 1.3
CDT1-202ENST00000562747 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
CDT1-202ENST00000562747 SLC12A5Q9H2X9 1139 aa23.15■■□□□ 1.3
CDT1-202ENST00000562747 TTC21AQ8NDW8 1320 aa23.14■■□□□ 1.3
CDT1-202ENST00000562747 NFAT5O94916 1531 aa23.14■■□□□ 1.3
CDT1-202ENST00000562747 EIF4G2P78344 907 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDT1-202ENST00000562747 HDGFL2Q7Z4V5 671 aaPredicted RBP23.14■■□□□ 1.29
CDT1-202ENST00000562747 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
CDT1-202ENST00000562747 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
CDT1-202ENST00000562747 TOM1L2Q6ZVM7 507 aa23.13■■□□□ 1.29
CDT1-202ENST00000562747 TERF2IPQ9NYB0 399 aa23.13■■□□□ 1.29
CDT1-202ENST00000562747 DDB1Q16531 1140 aa23.12■■□□□ 1.29
CDT1-202ENST00000562747 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
CDT1-202ENST00000562747 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
CDT1-202ENST00000562747 C11orf95C9JLR9 678 aaPredicted RBP23.09■■□□□ 1.29
CDT1-202ENST00000562747 ARHGEF25Q86VW2 580 aa23.09■■□□□ 1.29
CDT1-202ENST00000562747 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
CDT1-202ENST00000562747 EDC4Q6P2E9 1401 aaKnown RBP23.08■■□□□ 1.29
CDT1-202ENST00000562747 SOX12O15370 315 aa23.08■■□□□ 1.29
CDT1-202ENST00000562747 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
CDT1-202ENST00000562747 SPON1Q9HCB6 807 aa23.08■■□□□ 1.29
CDT1-202ENST00000562747 USP54Q70EL1 1684 aa23.07■■□□□ 1.28
CDT1-202ENST00000562747 PLSCR1O15162 318 aa23.07■■□□□ 1.28
CDT1-202ENST00000562747 KCNQ2O43526 872 aa23.07■■□□□ 1.28
CDT1-202ENST00000562747 BCL9O00512 1426 aa23.07■■□□□ 1.28
CDT1-202ENST00000562747 BCL11BQ9C0K0 894 aaPredicted RBP23.06■■□□□ 1.28
CDT1-202ENST00000562747 ANKRD36BQ8N2N9 1353 aa23.05■■□□□ 1.28
CDT1-202ENST00000562747 ABCC6O95255 1503 aa23.05■■□□□ 1.28
CDT1-202ENST00000562747 PROM2Q8N271 834 aa23.05■■□□□ 1.28
CDT1-202ENST00000562747 MYOM1P52179 1685 aa23.04■■□□□ 1.28
CDT1-202ENST00000562747 PDGFDQ9GZP0 370 aaPredicted RBP23.04■■□□□ 1.28
CDT1-202ENST00000562747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
CDT1-202ENST00000562747 KCNH5Q8NCM2 988 aa23.03■■□□□ 1.28
CDT1-202ENST00000562747 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
CDT1-202ENST00000562747 PPP1R1BQ9UD71 204 aaPredicted RBP23.03■■□□□ 1.28
CDT1-202ENST00000562747 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
CDT1-202ENST00000562747 LTN1O94822 1766 aa23.02■■□□□ 1.28
CDT1-202ENST00000562747 TNS2Q63HR2 1409 aa23.02■■□□□ 1.28
CDT1-202ENST00000562747 CDCA7Q9BWT1 371 aaPredicted RBP23.02■■□□□ 1.28
CDT1-202ENST00000562747 NHSQ6T4R5 1651 aa23.02■■□□□ 1.28
CDT1-202ENST00000562747 CSB-PGBD3P0DP91 1061 aa23.01■■□□□ 1.27
CDT1-202ENST00000562747 YY1P25490 414 aa22.99■■□□□ 1.27
CDT1-202ENST00000562747 NME9Q86XW9 330 aa22.99■■□□□ 1.27
CDT1-202ENST00000562747 CCDC7Q96M83 1385 aa22.98■■□□□ 1.27
CDT1-202ENST00000562747 PAPPAQ13219 1627 aa22.96■■□□□ 1.27
CDT1-202ENST00000562747 ZBTB7AO95365 584 aa22.95■■□□□ 1.26
CDT1-202ENST00000562747 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
CDT1-202ENST00000562747 EXOC5O00471 708 aa22.94■■□□□ 1.26
CDT1-202ENST00000562747 BTAF1O14981 1849 aa22.94■■□□□ 1.26
CDT1-202ENST00000562747 ERBB3P21860 1342 aa22.93■■□□□ 1.26
CDT1-202ENST00000562747 PTGER2P43116 358 aa22.93■■□□□ 1.26
CDT1-202ENST00000562747 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
CDT1-202ENST00000562747 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
CDT1-202ENST00000562747 ACSBG1Q96GR2 724 aa22.9■■□□□ 1.26
CDT1-202ENST00000562747 COG3Q96JB2 828 aa22.9■■□□□ 1.26
CDT1-202ENST00000562747 STK32BQ9NY57 414 aa22.9■■□□□ 1.26
CDT1-202ENST00000562747 ATF5Q9Y2D1 282 aaPredicted RBP22.9■■□□□ 1.26
CDT1-202ENST00000562747 FYB1O15117 783 aa22.88■■□□□ 1.25
CDT1-202ENST00000562747 CARD14Q9BXL6 1004 aa22.88■■□□□ 1.25
CDT1-202ENST00000562747 NLRP2Q9NX02 1062 aa22.88■■□□□ 1.25
CDT1-202ENST00000562747 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
CDT1-202ENST00000562747 KIF20BQ96Q89 1820 aa22.87■■□□□ 1.25
CDT1-202ENST00000562747 ANKRD24Q8TF21 1146 aa22.86■■□□□ 1.25
CDT1-202ENST00000562747 IL2RBP14784 551 aa22.85■■□□□ 1.25
CDT1-202ENST00000562747 FAM208AQ9UK61 1670 aaKnown RBP22.84■■□□□ 1.25
CDT1-202ENST00000562747 SGIP1Q9BQI5 828 aa22.84■■□□□ 1.25
CDT1-202ENST00000562747 GGNBP2Q9H3C7 697 aa22.84■■□□□ 1.25
CDT1-202ENST00000562747 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
CDT1-202ENST00000562747 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
CDT1-202ENST00000562747 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
CDT1-202ENST00000562747 MTFR1LQ9H019 292 aa22.82■■□□□ 1.24
CDT1-202ENST00000562747 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
CDT1-202ENST00000562747 ZNF827Q17R98 1081 aa22.81■■□□□ 1.24
CDT1-202ENST00000562747 PANK3Q9H999 370 aa22.81■■□□□ 1.24
CDT1-202ENST00000562747 SHANK3Q9BYB0 1731 aa22.81■■□□□ 1.24
CDT1-202ENST00000562747 RGPD2P0DJD1 1756 aa22.81■■□□□ 1.24
CDT1-202ENST00000562747 TUBGCP6Q96RT7 1819 aa22.8■■□□□ 1.24
CDT1-202ENST00000562747 UTRNP46939 3433 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms