RNA–Protein interactions for RNA: ENST00000561996.1

CPT1A-207, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-207ENST00000561996 ABCC6O95255 1503 aa26.17■■□□□ 1.78
CPT1A-207ENST00000561996 COL18A1P39060 1754 aa26.17■■□□□ 1.78
CPT1A-207ENST00000561996 NFAT5O94916 1531 aa26.16■■□□□ 1.78
CPT1A-207ENST00000561996 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
CPT1A-207ENST00000561996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.16■■□□□ 1.78
CPT1A-207ENST00000561996 AXIN2Q9Y2T1 843 aa26.16■■□□□ 1.78
CPT1A-207ENST00000561996 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
CPT1A-207ENST00000561996 CDCA7Q9BWT1 371 aaPredicted RBP26.14■■□□□ 1.78
CPT1A-207ENST00000561996 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
CPT1A-207ENST00000561996 USP54Q70EL1 1684 aa26.12■■□□□ 1.77
CPT1A-207ENST00000561996 A0A1W2PP64 1363 aa26.12■■□□□ 1.77
CPT1A-207ENST00000561996 PARD3Q8TEW0 1356 aa26.12■■□□□ 1.77
CPT1A-207ENST00000561996 PARP4Q9UKK3 1724 aaKnown RBP26.12■■□□□ 1.77
CPT1A-207ENST00000561996 SOX12O15370 315 aa26.12■■□□□ 1.77
CPT1A-207ENST00000561996 TRIM37O94972 964 aa26.12■■□□□ 1.77
CPT1A-207ENST00000561996 NME9Q86XW9 330 aa26.11■■□□□ 1.77
CPT1A-207ENST00000561996 CARD10Q9BWT7 1032 aa26.11■■□□□ 1.77
CPT1A-207ENST00000561996 TNS1Q9HBL0 1735 aaKnown RBP26.1■■□□□ 1.77
CPT1A-207ENST00000561996 CSB-PGBD3P0DP91 1061 aa26.09■■□□□ 1.77
CPT1A-207ENST00000561996 USP47Q96K76 1375 aa26.08■■□□□ 1.77
CPT1A-207ENST00000561996 DDB1Q16531 1140 aa26.08■■□□□ 1.77
CPT1A-207ENST00000561996 SRCAPQ6ZRS2 3230 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 OVOS2A0A0G2JMS6 1433 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 OVOS2A0A0J9YW53 1432 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 OVOS2Q6IE36 1432 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 APBA3O96018 575 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 TMF1P82094 1093 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 CAMKK2Q96RR4 588 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
CPT1A-207ENST00000561996 EZH2Q15910 746 aaKnown RBP26.04■■□□□ 1.76
CPT1A-207ENST00000561996 CDCA8Q53HL2 280 aa26.04■■□□□ 1.76
CPT1A-207ENST00000561996 ANKRD36BQ8N2N9 1353 aa26.03■■□□□ 1.76
CPT1A-207ENST00000561996 LRRC37A3O60309 1634 aa26.03■■□□□ 1.76
CPT1A-207ENST00000561996 ERBB3P21860 1342 aa26.02■■□□□ 1.76
CPT1A-207ENST00000561996 BCL9O00512 1426 aa26.02■■□□□ 1.76
CPT1A-207ENST00000561996 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
CPT1A-207ENST00000561996 PEAK1Q9H792 1746 aa25.99■■□□□ 1.75
CPT1A-207ENST00000561996 EXOC5O00471 708 aa25.98■■□□□ 1.75
CPT1A-207ENST00000561996 COG3Q96JB2 828 aa25.98■■□□□ 1.75
CPT1A-207ENST00000561996 RGPD5Q99666 1765 aa25.97■■□□□ 1.75
CPT1A-207ENST00000561996 PSDA5PKW4 1024 aaPredicted RBP25.97■■□□□ 1.75
CPT1A-207ENST00000561996 WNK3Q9BYP7 1800 aa25.97■■□□□ 1.75
CPT1A-207ENST00000561996 MARCH10Q8NA82 808 aaPredicted RBP25.96■■□□□ 1.75
CPT1A-207ENST00000561996 ANKRD24Q8TF21 1146 aa25.95■■□□□ 1.74
CPT1A-207ENST00000561996 IP6K1Q92551 441 aa25.95■■□□□ 1.74
CPT1A-207ENST00000561996 BCL11BQ9C0K0 894 aaPredicted RBP25.95■■□□□ 1.74
CPT1A-207ENST00000561996 NLRP2Q9NX02 1062 aa25.95■■□□□ 1.74
CPT1A-207ENST00000561996 R3HDM1Q15032 1099 aaKnown RBP25.94■■□□□ 1.74
CPT1A-207ENST00000561996 LRP5O75197 1615 aa25.93■■□□□ 1.74
CPT1A-207ENST00000561996 LTN1O94822 1766 aa25.93■■□□□ 1.74
CPT1A-207ENST00000561996 PLSCR1O15162 318 aa25.93■■□□□ 1.74
CPT1A-207ENST00000561996 TNS2Q63HR2 1409 aa25.93■■□□□ 1.74
CPT1A-207ENST00000561996 NBPF14Q5TI25 921 aa25.92■■□□□ 1.74
CPT1A-207ENST00000561996 IL2RBP14784 551 aa25.91■■□□□ 1.74
CPT1A-207ENST00000561996 RREB1Q92766 1687 aa25.9■■□□□ 1.74
CPT1A-207ENST00000561996 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
CPT1A-207ENST00000561996 FYB1O15117 783 aa25.88■■□□□ 1.73
CPT1A-207ENST00000561996 RGPD3A6NKT7 1758 aaPredicted RBP25.87■■□□□ 1.73
CPT1A-207ENST00000561996 RGPD4Q7Z3J3 1758 aa25.87■■□□□ 1.73
CPT1A-207ENST00000561996 RTL1A6NKG5 1358 aa25.86■■□□□ 1.73
CPT1A-207ENST00000561996 AMPHP49418 695 aa25.86■■□□□ 1.73
CPT1A-207ENST00000561996 SBF2Q86WG5 1849 aa25.86■■□□□ 1.73
CPT1A-207ENST00000561996 HOXC9P31274 260 aa25.85■■□□□ 1.73
CPT1A-207ENST00000561996 NUP188Q5SRE5 1749 aa25.85■■□□□ 1.73
CPT1A-207ENST00000561996 GGNBP2Q9H3C7 697 aa25.83■■□□□ 1.73
CPT1A-207ENST00000561996 FAM208AQ9UK61 1670 aaKnown RBP25.83■■□□□ 1.73
CPT1A-207ENST00000561996 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
CPT1A-207ENST00000561996 PTF1AQ7RTS3 328 aa25.8■■□□□ 1.72
CPT1A-207ENST00000561996 LTV1Q96GA3 475 aaPredicted RBP25.8■■□□□ 1.72
CPT1A-207ENST00000561996 KIF24Q5T7B8 1368 aa25.8■■□□□ 1.72
CPT1A-207ENST00000561996 FBLN1P23142 703 aa25.77■■□□□ 1.72
CPT1A-207ENST00000561996 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
CPT1A-207ENST00000561996 EIF4G2P78344 907 aaKnown RBP eCLIP25.76■■□□□ 1.71
CPT1A-207ENST00000561996 RRS1Q15050 365 aaKnown RBP25.76■■□□□ 1.71
CPT1A-207ENST00000561996 NSD3Q9BZ95 1437 aa25.76■■□□□ 1.71
CPT1A-207ENST00000561996 SMG6Q86US8 1419 aaKnown RBP25.75■■□□□ 1.71
CPT1A-207ENST00000561996 PROM2Q8N271 834 aa25.75■■□□□ 1.71
CPT1A-207ENST00000561996 MYOM1P52179 1685 aa25.74■■□□□ 1.71
CPT1A-207ENST00000561996 KCNQ2O43526 872 aa25.74■■□□□ 1.71
CPT1A-207ENST00000561996 NHSQ6T4R5 1651 aa25.74■■□□□ 1.71
CPT1A-207ENST00000561996 INSRP06213 1382 aa25.73■■□□□ 1.71
CPT1A-207ENST00000561996 FLT4P35916 1363 aa25.73■■□□□ 1.71
CPT1A-207ENST00000561996 TXNRD1Q16881 649 aa25.73■■□□□ 1.71
CPT1A-207ENST00000561996 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
CPT1A-207ENST00000561996 ACSBG1Q96GR2 724 aa25.72■■□□□ 1.71
CPT1A-207ENST00000561996 KIF20BQ96Q89 1820 aa25.72■■□□□ 1.71
CPT1A-207ENST00000561996 ANO8Q9HCE9 1232 aaPredicted RBP25.7■■□□□ 1.7
CPT1A-207ENST00000561996 DDX54Q8TDD1 881 aaKnown RBP25.69■■□□□ 1.7
CPT1A-207ENST00000561996 SPON1Q9HCB6 807 aa25.69■■□□□ 1.7
CPT1A-207ENST00000561996 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
CPT1A-207ENST00000561996 ZCRB1Q8TBF4 217 aaKnown RBP25.68■■□□□ 1.7
CPT1A-207ENST00000561996 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
CPT1A-207ENST00000561996 HSPA5P11021 654 aaKnown RBP25.67■■□□□ 1.7
CPT1A-207ENST00000561996 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
CPT1A-207ENST00000561996 STK32BQ9NY57 414 aa25.67■■□□□ 1.7
CPT1A-207ENST00000561996 RAPGEF4Q8WZA2 1011 aa25.66■■□□□ 1.7
CPT1A-207ENST00000561996 MEGF6O75095 1541 aa25.65■■□□□ 1.7
CPT1A-207ENST00000561996 SLC15A2Q16348 729 aa25.64■■□□□ 1.7
CPT1A-207ENST00000561996 POLR3GLQ9BT43 218 aa25.63■■□□□ 1.69
CPT1A-207ENST00000561996 TATP17735 454 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms