RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
AC055717.2-201ENST00000561864 KDM2BQ8NHM5 1336 aa16.33■□□□□ 0.2
AC055717.2-201ENST00000561864 ARHGEF10O15013 1369 aa16.33■□□□□ 0.2
AC055717.2-201ENST00000561864 FLT4P35916 1363 aa16.33■□□□□ 0.2
AC055717.2-201ENST00000561864 HMOX1P09601 288 aa16.32■□□□□ 0.2
AC055717.2-201ENST00000561864 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
AC055717.2-201ENST00000561864 MS4A1P11836 297 aa16.31■□□□□ 0.2
AC055717.2-201ENST00000561864 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
AC055717.2-201ENST00000561864 EXOSC9Q06265 439 aaKnown RBP16.3■□□□□ 0.2
AC055717.2-201ENST00000561864 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
AC055717.2-201ENST00000561864 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
AC055717.2-201ENST00000561864 MAP3K19Q56UN5 1328 aa16.29■□□□□ 0.2
AC055717.2-201ENST00000561864 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
AC055717.2-201ENST00000561864 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
AC055717.2-201ENST00000561864 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
AC055717.2-201ENST00000561864 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
AC055717.2-201ENST00000561864 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
AC055717.2-201ENST00000561864 STRCQ7RTU9 1775 aa16.28■□□□□ 0.2
AC055717.2-201ENST00000561864 GNAI1P63096 354 aa16.27■□□□□ 0.2
AC055717.2-201ENST00000561864 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.2
AC055717.2-201ENST00000561864 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
AC055717.2-201ENST00000561864 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
AC055717.2-201ENST00000561864 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
AC055717.2-201ENST00000561864 KDRP35968 1356 aa16.26■□□□□ 0.19
AC055717.2-201ENST00000561864 KIF16BQ96L93 1317 aa16.25■□□□□ 0.19
AC055717.2-201ENST00000561864 NLRP6P59044 892 aa16.25■□□□□ 0.19
AC055717.2-201ENST00000561864 PANK1Q8TE04 598 aa16.25■□□□□ 0.19
AC055717.2-201ENST00000561864 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
AC055717.2-201ENST00000561864 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
AC055717.2-201ENST00000561864 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
AC055717.2-201ENST00000561864 HSP90AB2PQ58FF8 381 aa16.24■□□□□ 0.19
AC055717.2-201ENST00000561864 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
AC055717.2-201ENST00000561864 NFAT5O94916 1531 aa16.24■□□□□ 0.19
AC055717.2-201ENST00000561864 AMPHP49418 695 aa16.23■□□□□ 0.19
AC055717.2-201ENST00000561864 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
AC055717.2-201ENST00000561864 LTN1O94822 1766 aa16.23■□□□□ 0.19
AC055717.2-201ENST00000561864 IGSF1Q8N6C5 1336 aa16.22■□□□□ 0.19
AC055717.2-201ENST00000561864 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
AC055717.2-201ENST00000561864 AEBP1Q8IUX7 1158 aa16.22■□□□□ 0.19
AC055717.2-201ENST00000561864 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
AC055717.2-201ENST00000561864 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
AC055717.2-201ENST00000561864 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 SLIT3O75094 1523 aa16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 CFAP44Q96MT7 982 aa16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.19
AC055717.2-201ENST00000561864 DCCP43146 1447 aa16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 SOX12O15370 315 aa16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 DZIP1LQ8IYY4 767 aaKnown RBP16.2■□□□□ 0.18
AC055717.2-201ENST00000561864 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
AC055717.2-201ENST00000561864 RLBP1P12271 317 aa16.19■□□□□ 0.18
AC055717.2-201ENST00000561864 HOXC9P31274 260 aa16.19■□□□□ 0.18
AC055717.2-201ENST00000561864 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
AC055717.2-201ENST00000561864 MST1RQ04912 1400 aa16.19■□□□□ 0.18
AC055717.2-201ENST00000561864 PAK3O75914 559 aaPredicted RBP16.18■□□□□ 0.18
AC055717.2-201ENST00000561864 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
AC055717.2-201ENST00000561864 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
AC055717.2-201ENST00000561864 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
AC055717.2-201ENST00000561864 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
AC055717.2-201ENST00000561864 TRIM27P14373 513 aa16.17■□□□□ 0.18
AC055717.2-201ENST00000561864 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
AC055717.2-201ENST00000561864 PSME1Q06323 249 aa16.17■□□□□ 0.18
AC055717.2-201ENST00000561864 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
AC055717.2-201ENST00000561864 KCNH5Q8NCM2 988 aa16.17■□□□□ 0.18
AC055717.2-201ENST00000561864 C1orf167Q5SNV9 1468 aa16.16■□□□□ 0.18
AC055717.2-201ENST00000561864 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
AC055717.2-201ENST00000561864 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
AC055717.2-201ENST00000561864 ZNF335Q9H4Z2 1342 aaPredicted RBP16.16■□□□□ 0.18
AC055717.2-201ENST00000561864 KIAA0232Q92628 1395 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 VAMP4O75379 141 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 CRB1P82279 1406 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 EYA1Q99502 592 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 STRCP1A6NGW2 1772 aa16.15■□□□□ 0.18
AC055717.2-201ENST00000561864 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
AC055717.2-201ENST00000561864 PDE4AP27815 886 aa16.14■□□□□ 0.17
AC055717.2-201ENST00000561864 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
AC055717.2-201ENST00000561864 C19orf44Q9H6X5 657 aa16.14■□□□□ 0.17
AC055717.2-201ENST00000561864 FAM83GA6ND36 823 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 CHL1O00533 1208 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 NUTM2GQ5VZR2 741 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 IP6K1Q92551 441 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
AC055717.2-201ENST00000561864 IGHDP01880 384 aa16.12■□□□□ 0.17
AC055717.2-201ENST00000561864 CHMP4BQ9H444 224 aaKnown RBP16.12■□□□□ 0.17
AC055717.2-201ENST00000561864 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
AC055717.2-201ENST00000561864 USP19O94966 1318 aa16.12■□□□□ 0.17
AC055717.2-201ENST00000561864 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
AC055717.2-201ENST00000561864 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
AC055717.2-201ENST00000561864 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
AC055717.2-201ENST00000561864 RTF1Q92541 710 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms