RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-222ENST00000561212 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
ZEB1-222ENST00000561212 TRPM3Q9HCF6 1732 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-222ENST00000561212 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
ZEB1-222ENST00000561212 ZNF335Q9H4Z2 1342 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-222ENST00000561212 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
ZEB1-222ENST00000561212 CDK12Q9NYV4 1490 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-222ENST00000561212 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
ZEB1-222ENST00000561212 COG3Q96JB2 828 aa9.79□□□□□ -0.84
ZEB1-222ENST00000561212 RCAN3Q9UKA8 241 aa9.79□□□□□ -0.84
ZEB1-222ENST00000561212 PEAK1Q9H792 1746 aa9.79□□□□□ -0.84
ZEB1-222ENST00000561212 KIF1AQ12756 1690 aa9.79□□□□□ -0.84
ZEB1-222ENST00000561212 SENP3-EIF4A1A0A087X0R7 540 aa9.78□□□□□ -0.84
ZEB1-222ENST00000561212 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
ZEB1-222ENST00000561212 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
ZEB1-222ENST00000561212 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.84
ZEB1-222ENST00000561212 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.84
ZEB1-222ENST00000561212 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.84
ZEB1-222ENST00000561212 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.84
ZEB1-222ENST00000561212 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
ZEB1-222ENST00000561212 PCDH10Q9P2E7 1040 aa9.77□□□□□ -0.85
ZEB1-222ENST00000561212 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
ZEB1-222ENST00000561212 ALS2Q96Q42 1657 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 NFAT5O94916 1531 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 IL13P35225 146 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 CFAP53Q96M91 514 aa9.76□□□□□ -0.85
ZEB1-222ENST00000561212 PHRF1Q9P1Y6 1649 aaKnown RBP9.75□□□□□ -0.85
ZEB1-222ENST00000561212 FOXO3O43524 673 aa9.75□□□□□ -0.85
ZEB1-222ENST00000561212 GOLGA2Q08379 1002 aa9.75□□□□□ -0.85
ZEB1-222ENST00000561212 RRS1Q15050 365 aaKnown RBP9.75□□□□□ -0.85
ZEB1-222ENST00000561212 C14orf37Q86TY3 774 aa9.75□□□□□ -0.85
ZEB1-222ENST00000561212 MSH6P52701 1360 aa9.75□□□□□ -0.85
ZEB1-222ENST00000561212 KIF24Q5T7B8 1368 aa9.75□□□□□ -0.85
ZEB1-222ENST00000561212 SLIT3O75094 1523 aa9.74□□□□□ -0.85
ZEB1-222ENST00000561212 PXDNQ92626 1479 aa9.74□□□□□ -0.85
ZEB1-222ENST00000561212 DIAPH1O60610 1272 aaKnown RBP9.74□□□□□ -0.85
ZEB1-222ENST00000561212 ATF3P18847 181 aa9.74□□□□□ -0.85
ZEB1-222ENST00000561212 DUSP27Q5VZP5 1158 aa9.74□□□□□ -0.85
ZEB1-222ENST00000561212 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
ZEB1-222ENST00000561212 USP19O94966 1318 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 APAF1O14727 1248 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 CD44P16070 742 aaKnown RBP9.73□□□□□ -0.85
ZEB1-222ENST00000561212 NLRP6P59044 892 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 RUNDC1Q96C34 613 aa9.73□□□□□ -0.85
ZEB1-222ENST00000561212 PSME1Q06323 249 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 CCDC146Q8IYE0 955 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 ABTB2Q8N961 1025 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 CRYBG1Q9Y4K1 1723 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 E9PSI1 815 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 FCHSD2O94868 740 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 BRINP3Q76B58 766 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 KRT28Q7Z3Y7 464 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 TCP11L2Q8N4U5 519 aa9.72□□□□□ -0.85
ZEB1-222ENST00000561212 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.85
ZEB1-222ENST00000561212 U2AF1L5P0DN76 240 aaPredicted RBP9.71□□□□□ -0.86
ZEB1-222ENST00000561212 U2AF1Q01081 240 aaKnown RBP eCLIP9.71□□□□□ -0.86
ZEB1-222ENST00000561212 EIF4A2Q14240 407 aaKnown RBP9.71□□□□□ -0.86
ZEB1-222ENST00000561212 HSP90AB2PQ58FF8 381 aa9.71□□□□□ -0.86
ZEB1-222ENST00000561212 SLAIN2Q9P270 581 aa9.71□□□□□ -0.86
ZEB1-222ENST00000561212 LTN1O94822 1766 aa9.7□□□□□ -0.86
ZEB1-222ENST00000561212 FLT4P35916 1363 aa9.7□□□□□ -0.86
ZEB1-222ENST00000561212 KDRP35968 1356 aa9.7□□□□□ -0.86
ZEB1-222ENST00000561212 WWC1Q8IX03 1113 aa9.7□□□□□ -0.86
ZEB1-222ENST00000561212 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
ZEB1-222ENST00000561212 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
ZEB1-222ENST00000561212 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
ZEB1-222ENST00000561212 XPCQ01831 940 aaPredicted RBP9.69□□□□□ -0.86
ZEB1-222ENST00000561212 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
ZEB1-222ENST00000561212 DDX17Q92841 729 aaKnown RBP9.69□□□□□ -0.86
ZEB1-222ENST00000561212 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
ZEB1-222ENST00000561212 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
ZEB1-222ENST00000561212 RTL1A6NKG5 1358 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
ZEB1-222ENST00000561212 PAK3O75914 559 aaPredicted RBP9.68□□□□□ -0.86
ZEB1-222ENST00000561212 GCP02774 474 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 TRIM35Q9UPQ4 493 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 SPATA31A3Q5VYP0 1347 aa9.68□□□□□ -0.86
ZEB1-222ENST00000561212 COL18A1P39060 1754 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
ZEB1-222ENST00000561212 HOXC9P31274 260 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 TMPOP42166 694 aaKnown RBP9.67□□□□□ -0.86
ZEB1-222ENST00000561212 KCNH5Q8NCM2 988 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 RBM19Q9Y4C8 960 aaKnown RBP9.67□□□□□ -0.86
ZEB1-222ENST00000561212 TNS3Q68CZ2 1445 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 IGSF1Q8N6C5 1336 aa9.67□□□□□ -0.86
ZEB1-222ENST00000561212 NCAPD2Q15021 1401 aa9.66□□□□□ -0.86
ZEB1-222ENST00000561212 WDR63Q8IWG1 891 aa9.66□□□□□ -0.86
ZEB1-222ENST00000561212 IP6K1Q92551 441 aa9.66□□□□□ -0.86
ZEB1-222ENST00000561212 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms