RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 TNS1Q9HBL0 1735 aaKnown RBP26.23■■□□□ 1.79
TPM1-224ENST00000560615 OVOS2A0A0G2JMS6 1433 aa26.22■■□□□ 1.79
TPM1-224ENST00000560615 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
TPM1-224ENST00000560615 OVOS2Q6IE36 1432 aa26.22■■□□□ 1.79
TPM1-224ENST00000560615 TMC1Q8TDI8 760 aa26.22■■□□□ 1.79
TPM1-224ENST00000560615 SLC24A1O60721 1099 aa26.21■■□□□ 1.79
TPM1-224ENST00000560615 AXIN2Q9Y2T1 843 aa26.21■■□□□ 1.79
TPM1-224ENST00000560615 PIK3C2AO00443 1686 aa26.21■■□□□ 1.79
TPM1-224ENST00000560615 CARD10Q9BWT7 1032 aa26.2■■□□□ 1.78
TPM1-224ENST00000560615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
TPM1-224ENST00000560615 TERF2IPQ9NYB0 399 aa26.19■■□□□ 1.78
TPM1-224ENST00000560615 PARP4Q9UKK3 1724 aaKnown RBP26.19■■□□□ 1.78
TPM1-224ENST00000560615 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
TPM1-224ENST00000560615 EXOC5O00471 708 aa26.16■■□□□ 1.78
TPM1-224ENST00000560615 BCL11BQ9C0K0 894 aaPredicted RBP26.15■■□□□ 1.78
TPM1-224ENST00000560615 USP31Q70CQ4 1352 aa26.15■■□□□ 1.78
TPM1-224ENST00000560615 CCDC7Q96M83 1385 aa26.15■■□□□ 1.78
TPM1-224ENST00000560615 PLSCR1O15162 318 aa26.14■■□□□ 1.78
TPM1-224ENST00000560615 AKAP12Q02952 1782 aa26.14■■□□□ 1.78
TPM1-224ENST00000560615 COL18A1P39060 1754 aa26.11■■□□□ 1.77
TPM1-224ENST00000560615 ABCC6O95255 1503 aa26.11■■□□□ 1.77
TPM1-224ENST00000560615 SLC12A5Q9H2X9 1139 aa26.11■■□□□ 1.77
TPM1-224ENST00000560615 NME9Q86XW9 330 aa26.1■■□□□ 1.77
TPM1-224ENST00000560615 BCL9O00512 1426 aa26.09■■□□□ 1.77
TPM1-224ENST00000560615 EDC4Q6P2E9 1401 aaKnown RBP26.09■■□□□ 1.77
TPM1-224ENST00000560615 MARCH10Q8NA82 808 aaPredicted RBP26.09■■□□□ 1.77
TPM1-224ENST00000560615 NFAT5O94916 1531 aa26.08■■□□□ 1.77
TPM1-224ENST00000560615 NINLQ9Y2I6 1382 aa26.07■■□□□ 1.76
TPM1-224ENST00000560615 LRRC37A3O60309 1634 aa26.07■■□□□ 1.76
TPM1-224ENST00000560615 NLRP2Q9NX02 1062 aa26.07■■□□□ 1.76
TPM1-224ENST00000560615 MON2Q7Z3U7 1717 aa26.05■■□□□ 1.76
TPM1-224ENST00000560615 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
TPM1-224ENST00000560615 SPON1Q9HCB6 807 aa26.05■■□□□ 1.76
TPM1-224ENST00000560615 ERBB3P21860 1342 aa26.05■■□□□ 1.76
TPM1-224ENST00000560615 RREB1Q92766 1687 aa26.05■■□□□ 1.76
TPM1-224ENST00000560615 CD163L1Q9NR16 1453 aa26.04■■□□□ 1.76
TPM1-224ENST00000560615 PPP1R1BQ9UD71 204 aaPredicted RBP26.04■■□□□ 1.76
TPM1-224ENST00000560615 PEAK1Q9H792 1746 aa26.02■■□□□ 1.76
TPM1-224ENST00000560615 ST20-MTHFSA0A0A6YYL1 179 aa26.02■■□□□ 1.76
TPM1-224ENST00000560615 IL2RBP14784 551 aa26.02■■□□□ 1.76
TPM1-224ENST00000560615 ANKRD24Q8TF21 1146 aa26.02■■□□□ 1.76
TPM1-224ENST00000560615 A0A1W2PP64 1363 aa26.02■■□□□ 1.76
TPM1-224ENST00000560615 KCNQ2O43526 872 aa26.01■■□□□ 1.75
TPM1-224ENST00000560615 NUP188Q5SRE5 1749 aa26■■□□□ 1.75
TPM1-224ENST00000560615 COG3Q96JB2 828 aa26■■□□□ 1.75
TPM1-224ENST00000560615 TNS2Q63HR2 1409 aa25.99■■□□□ 1.75
TPM1-224ENST00000560615 DCAF8L1A6NGE4 600 aa25.99■■□□□ 1.75
TPM1-224ENST00000560615 TESK2Q96S53 571 aa25.98■■□□□ 1.75
TPM1-224ENST00000560615 RGPD3A6NKT7 1758 aaPredicted RBP25.97■■□□□ 1.75
TPM1-224ENST00000560615 RGPD4Q7Z3J3 1758 aa25.97■■□□□ 1.75
TPM1-224ENST00000560615 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 WNK3Q9BYP7 1800 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 TMF1P82094 1093 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 TXNRD1Q16881 649 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 IP6K1Q92551 441 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 STK32BQ9NY57 414 aa25.96■■□□□ 1.75
TPM1-224ENST00000560615 RGPD5Q99666 1765 aa25.95■■□□□ 1.75
TPM1-224ENST00000560615 PTF1AQ7RTS3 328 aa25.95■■□□□ 1.74
TPM1-224ENST00000560615 CDCA8Q53HL2 280 aa25.94■■□□□ 1.74
TPM1-224ENST00000560615 AMPHP49418 695 aa25.92■■□□□ 1.74
TPM1-224ENST00000560615 PROM2Q8N271 834 aa25.92■■□□□ 1.74
TPM1-224ENST00000560615 SBF2Q86WG5 1849 aa25.92■■□□□ 1.74
TPM1-224ENST00000560615 ANO8Q9HCE9 1232 aaPredicted RBP25.91■■□□□ 1.74
TPM1-224ENST00000560615 LTV1Q96GA3 475 aaPredicted RBP25.9■■□□□ 1.74
TPM1-224ENST00000560615 ACSBG1Q96GR2 724 aa25.9■■□□□ 1.74
TPM1-224ENST00000560615 ANKRD36BQ8N2N9 1353 aa25.9■■□□□ 1.74
TPM1-224ENST00000560615 SLC15A2Q16348 729 aa25.88■■□□□ 1.73
TPM1-224ENST00000560615 LTN1O94822 1766 aa25.87■■□□□ 1.73
TPM1-224ENST00000560615 USP47Q96K76 1375 aa25.86■■□□□ 1.73
TPM1-224ENST00000560615 MAP3K19Q56UN5 1328 aa25.86■■□□□ 1.73
TPM1-224ENST00000560615 HOXC9P31274 260 aa25.85■■□□□ 1.73
TPM1-224ENST00000560615 TIMELESSQ9UNS1 1208 aa25.85■■□□□ 1.73
TPM1-224ENST00000560615 DDX54Q8TDD1 881 aaKnown RBP25.84■■□□□ 1.73
TPM1-224ENST00000560615 ZBTB7AO95365 584 aa25.82■■□□□ 1.72
TPM1-224ENST00000560615 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
TPM1-224ENST00000560615 FYB1O15117 783 aa25.8■■□□□ 1.72
TPM1-224ENST00000560615 NHSQ6T4R5 1651 aa25.8■■□□□ 1.72
TPM1-224ENST00000560615 SMG6Q86US8 1419 aaKnown RBP25.8■■□□□ 1.72
TPM1-224ENST00000560615 MTFR1LQ9H019 292 aa25.79■■□□□ 1.72
TPM1-224ENST00000560615 GGNBP2Q9H3C7 697 aa25.79■■□□□ 1.72
TPM1-224ENST00000560615 FAM208AQ9UK61 1670 aaKnown RBP25.78■■□□□ 1.72
TPM1-224ENST00000560615 SLC27A3Q5K4L6 730 aa25.78■■□□□ 1.72
TPM1-224ENST00000560615 ZCRB1Q8TBF4 217 aaKnown RBP25.78■■□□□ 1.72
TPM1-224ENST00000560615 ATF5Q9Y2D1 282 aaPredicted RBP25.78■■□□□ 1.72
TPM1-224ENST00000560615 CGNL1Q0VF96 1302 aa25.77■■□□□ 1.72
TPM1-224ENST00000560615 SYTL4Q96C24 671 aaPredicted RBP25.76■■□□□ 1.71
TPM1-224ENST00000560615 YY1P25490 414 aa25.75■■□□□ 1.71
TPM1-224ENST00000560615 RRS1Q15050 365 aaKnown RBP25.75■■□□□ 1.71
TPM1-224ENST00000560615 RAPGEF4Q8WZA2 1011 aa25.75■■□□□ 1.71
TPM1-224ENST00000560615 PDGFDQ9GZP0 370 aaPredicted RBP25.75■■□□□ 1.71
TPM1-224ENST00000560615 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
TPM1-224ENST00000560615 FBLN1P23142 703 aa25.74■■□□□ 1.71
TPM1-224ENST00000560615 HMGB2P26583 209 aaKnown RBP25.73■■□□□ 1.71
TPM1-224ENST00000560615 CASZ1Q86V15 1759 aa25.72■■□□□ 1.71
TPM1-224ENST00000560615 PTGER2P43116 358 aa25.72■■□□□ 1.71
TPM1-224ENST00000560615 KIF24Q5T7B8 1368 aa25.71■■□□□ 1.71
TPM1-224ENST00000560615 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
TPM1-224ENST00000560615 PRIM1P49642 420 aaKnown RBP25.71■■□□□ 1.71
TPM1-224ENST00000560615 NBPF6Q5VWK0 638 aa25.7■■□□□ 1.7
TPM1-224ENST00000560615 NBPF4Q96M43 638 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms