RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 BCL2L13Q9BXK5 485 aa14.45□□□□□ -0.1
CLPX-204ENST00000559152 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
CLPX-204ENST00000559152 SSH2Q76I76 1423 aa14.44□□□□□ -0.1
CLPX-204ENST00000559152 ANKARQ7Z5J8 1434 aa14.44□□□□□ -0.1
CLPX-204ENST00000559152 IFT57Q9NWB7 429 aa14.44□□□□□ -0.1
CLPX-204ENST00000559152 NOP58Q9Y2X3 529 aaKnown RBP14.44□□□□□ -0.1
CLPX-204ENST00000559152 PHACTR3Q96KR7 559 aa14.43□□□□□ -0.1
CLPX-204ENST00000559152 FAM161AQ3B820 660 aa14.43□□□□□ -0.1
CLPX-204ENST00000559152 SSH1Q8WYL5 1049 aa14.43□□□□□ -0.1
CLPX-204ENST00000559152 RWDD1Q9H446 243 aaPredicted RBP14.43□□□□□ -0.1
CLPX-204ENST00000559152 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
CLPX-204ENST00000559152 RLBP1P12271 317 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 BRPF1P55201 1214 aaPredicted RBP14.42□□□□□ -0.1
CLPX-204ENST00000559152 ATF7IPQ6VMQ6 1270 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 NGDNQ8NEJ9 315 aaKnown RBP14.42□□□□□ -0.1
CLPX-204ENST00000559152 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 IGHDP01880 384 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
CLPX-204ENST00000559152 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
CLPX-204ENST00000559152 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
CLPX-204ENST00000559152 CHMP4BQ9H444 224 aaKnown RBP14.4□□□□□ -0.1
CLPX-204ENST00000559152 NALCNQ8IZF0 1738 aa14.4□□□□□ -0.1
CLPX-204ENST00000559152 ZNF853P0CG23 659 aa14.39□□□□□ -0.11
CLPX-204ENST00000559152 TRIM27P14373 513 aa14.39□□□□□ -0.11
CLPX-204ENST00000559152 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
CLPX-204ENST00000559152 HAP1P54257 671 aaPredicted RBP14.39□□□□□ -0.11
CLPX-204ENST00000559152 DDRGK1Q96HY6 314 aa14.39□□□□□ -0.11
CLPX-204ENST00000559152 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
CLPX-204ENST00000559152 LAS1LQ9Y4W2 734 aaKnown RBP14.39□□□□□ -0.11
CLPX-204ENST00000559152 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 KCNA6P17658 529 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 RGS3P49796 1198 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 PCDHB15Q9Y5E8 787 aa14.38□□□□□ -0.11
CLPX-204ENST00000559152 SULT6B1Q6IMI4 303 aa14.37□□□□□ -0.11
CLPX-204ENST00000559152 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
CLPX-204ENST00000559152 TNNQ9UQP3 1299 aa14.37□□□□□ -0.11
CLPX-204ENST00000559152 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
CLPX-204ENST00000559152 KIF24Q5T7B8 1368 aa14.37□□□□□ -0.11
CLPX-204ENST00000559152 ARHGEF10O15013 1369 aa14.36□□□□□ -0.11
CLPX-204ENST00000559152 FLT4P35916 1363 aa14.36□□□□□ -0.11
CLPX-204ENST00000559152 VAMP4O75379 141 aa14.36□□□□□ -0.11
CLPX-204ENST00000559152 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
CLPX-204ENST00000559152 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
CLPX-204ENST00000559152 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
CLPX-204ENST00000559152 MBIPQ9NS73 344 aa14.35□□□□□ -0.11
CLPX-204ENST00000559152 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
CLPX-204ENST00000559152 HSP90AB2PQ58FF8 381 aa14.35□□□□□ -0.11
CLPX-204ENST00000559152 MAP3K19Q56UN5 1328 aa14.34□□□□□ -0.11
CLPX-204ENST00000559152 FMN2Q9NZ56 1722 aa14.33□□□□□ -0.11
CLPX-204ENST00000559152 AMPHP49418 695 aa14.33□□□□□ -0.12
CLPX-204ENST00000559152 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
CLPX-204ENST00000559152 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
CLPX-204ENST00000559152 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
CLPX-204ENST00000559152 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
CLPX-204ENST00000559152 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
CLPX-204ENST00000559152 NLRP6P59044 892 aa14.32□□□□□ -0.12
CLPX-204ENST00000559152 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
CLPX-204ENST00000559152 SETD1BQ9UPS6 1966 aaKnown RBP14.32□□□□□ -0.12
CLPX-204ENST00000559152 PEAK1Q9H792 1746 aa14.32□□□□□ -0.12
CLPX-204ENST00000559152 ZBTB40Q9NUA8 1239 aa14.31□□□□□ -0.12
CLPX-204ENST00000559152 KDRP35968 1356 aa14.3□□□□□ -0.12
CLPX-204ENST00000559152 API5Q9BZZ5 524 aaKnown RBP14.3□□□□□ -0.12
CLPX-204ENST00000559152 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
CLPX-204ENST00000559152 CHD2O14647 1828 aaKnown RBP14.3□□□□□ -0.12
CLPX-204ENST00000559152 SOX12O15370 315 aa14.3□□□□□ -0.12
CLPX-204ENST00000559152 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
CLPX-204ENST00000559152 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 USP54Q70EL1 1684 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 CHL1O00533 1208 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
CLPX-204ENST00000559152 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 ABTB2Q8N961 1025 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 GAS2L2Q8NHY3 880 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
CLPX-204ENST00000559152 IGSF1Q8N6C5 1336 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
CLPX-204ENST00000559152 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
CLPX-204ENST00000559152 HTATSF1O43719 755 aaKnown RBP14.28□□□□□ -0.12
CLPX-204ENST00000559152 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
CLPX-204ENST00000559152 NPHP4O75161 1426 aaPredicted RBP14.27□□□□□ -0.12
CLPX-204ENST00000559152 ADGRL3Q9HAR2 1447 aa14.27□□□□□ -0.12
CLPX-204ENST00000559152 RTL1A6NKG5 1358 aa14.27□□□□□ -0.12
CLPX-204ENST00000559152 DCTN1Q14203 1278 aa14.27□□□□□ -0.13
CLPX-204ENST00000559152 SMC5Q8IY18 1101 aa14.27□□□□□ -0.13
CLPX-204ENST00000559152 ABCC4O15439 1325 aa14.27□□□□□ -0.13
CLPX-204ENST00000559152 DAXXQ9UER7 740 aaPredicted RBP14.26□□□□□ -0.13
CLPX-204ENST00000559152 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
CLPX-204ENST00000559152 ZBTB7BO15156 539 aaPredicted RBP14.26□□□□□ -0.13
CLPX-204ENST00000559152 HOXC9P31274 260 aa14.26□□□□□ -0.13
CLPX-204ENST00000559152 HSPA2P54652 639 aa14.26□□□□□ -0.13
CLPX-204ENST00000559152 EYA1Q99502 592 aa14.26□□□□□ -0.13
CLPX-204ENST00000559152 MCM10Q7L590 875 aa14.25□□□□□ -0.13
CLPX-204ENST00000559152 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
CLPX-204ENST00000559152 MTHFSDQ2M296 383 aaKnown RBP14.24□□□□□ -0.13
CLPX-204ENST00000559152 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms