RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TRIM37O94972 964 aa17.52■□□□□ 0.4
SMAD3-208ENST00000558827 BARGINQ6ZT62 677 aa17.52■□□□□ 0.4
SMAD3-208ENST00000558827 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
SMAD3-208ENST00000558827 COL18A1P39060 1754 aa17.52■□□□□ 0.4
SMAD3-208ENST00000558827 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
SMAD3-208ENST00000558827 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
SMAD3-208ENST00000558827 TIMELESSQ9UNS1 1208 aa17.51■□□□□ 0.39
SMAD3-208ENST00000558827 CRB1P82279 1406 aa17.5■□□□□ 0.39
SMAD3-208ENST00000558827 NFAT5O94916 1531 aa17.5■□□□□ 0.39
SMAD3-208ENST00000558827 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
SMAD3-208ENST00000558827 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
SMAD3-208ENST00000558827 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
SMAD3-208ENST00000558827 BAG6P46379 1132 aa17.48■□□□□ 0.39
SMAD3-208ENST00000558827 FAM196AQ6ZSG2 479 aa17.48■□□□□ 0.39
SMAD3-208ENST00000558827 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
SMAD3-208ENST00000558827 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
SMAD3-208ENST00000558827 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
SMAD3-208ENST00000558827 COG3Q96JB2 828 aa17.46■□□□□ 0.39
SMAD3-208ENST00000558827 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
SMAD3-208ENST00000558827 PSDA5PKW4 1024 aaPredicted RBP17.45■□□□□ 0.38
SMAD3-208ENST00000558827 APBA3O96018 575 aa17.45■□□□□ 0.38
SMAD3-208ENST00000558827 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
SMAD3-208ENST00000558827 DDB1Q16531 1140 aa17.45■□□□□ 0.38
SMAD3-208ENST00000558827 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
SMAD3-208ENST00000558827 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
SMAD3-208ENST00000558827 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
SMAD3-208ENST00000558827 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
SMAD3-208ENST00000558827 LTN1O94822 1766 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 FYB1O15117 783 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 CARD14Q9BXL6 1004 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
SMAD3-208ENST00000558827 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
SMAD3-208ENST00000558827 PTF1AQ7RTS3 328 aa17.42■□□□□ 0.38
SMAD3-208ENST00000558827 AMPHP49418 695 aa17.41■□□□□ 0.38
SMAD3-208ENST00000558827 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
SMAD3-208ENST00000558827 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
SMAD3-208ENST00000558827 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
SMAD3-208ENST00000558827 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMAD3-208ENST00000558827 IP6K1Q92551 441 aa17.4■□□□□ 0.38
SMAD3-208ENST00000558827 ERBB3P21860 1342 aa17.4■□□□□ 0.38
SMAD3-208ENST00000558827 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
SMAD3-208ENST00000558827 PARP4Q9UKK3 1724 aaKnown RBP17.39■□□□□ 0.37
SMAD3-208ENST00000558827 EXOC5O00471 708 aa17.39■□□□□ 0.37
SMAD3-208ENST00000558827 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
SMAD3-208ENST00000558827 CAMKK2Q96RR4 588 aa17.38■□□□□ 0.37
SMAD3-208ENST00000558827 LRRC37A3O60309 1634 aa17.37■□□□□ 0.37
SMAD3-208ENST00000558827 HOXC9P31274 260 aa17.37■□□□□ 0.37
SMAD3-208ENST00000558827 NSD3Q9BZ95 1437 aa17.37■□□□□ 0.37
SMAD3-208ENST00000558827 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
SMAD3-208ENST00000558827 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
SMAD3-208ENST00000558827 CCDC7Q96M83 1385 aa17.36■□□□□ 0.37
SMAD3-208ENST00000558827 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
SMAD3-208ENST00000558827 C11orf95C9JLR9 678 aaPredicted RBP17.35■□□□□ 0.37
SMAD3-208ENST00000558827 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
SMAD3-208ENST00000558827 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
SMAD3-208ENST00000558827 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
SMAD3-208ENST00000558827 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
SMAD3-208ENST00000558827 IL2RBP14784 551 aa17.34■□□□□ 0.37
SMAD3-208ENST00000558827 MYOM1P52179 1685 aa17.34■□□□□ 0.37
SMAD3-208ENST00000558827 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
SMAD3-208ENST00000558827 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
SMAD3-208ENST00000558827 KCNQ2O43526 872 aa17.32■□□□□ 0.36
SMAD3-208ENST00000558827 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
SMAD3-208ENST00000558827 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
SMAD3-208ENST00000558827 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
SMAD3-208ENST00000558827 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
SMAD3-208ENST00000558827 ABCC6O95255 1503 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 KIF20BQ96Q89 1820 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 PANK3Q9H999 370 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 SRCAPQ6ZRS2 3230 aa17.31■□□□□ 0.36
SMAD3-208ENST00000558827 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
SMAD3-208ENST00000558827 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
SMAD3-208ENST00000558827 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
SMAD3-208ENST00000558827 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
SMAD3-208ENST00000558827 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
SMAD3-208ENST00000558827 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
SMAD3-208ENST00000558827 NBPF14Q5TI25 921 aa17.25■□□□□ 0.35
SMAD3-208ENST00000558827 PROM2Q8N271 834 aa17.25■□□□□ 0.35
SMAD3-208ENST00000558827 CNGB1Q14028 1251 aaPredicted RBP17.23■□□□□ 0.35
SMAD3-208ENST00000558827 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
SMAD3-208ENST00000558827 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
SMAD3-208ENST00000558827 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
SMAD3-208ENST00000558827 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SMAD3-208ENST00000558827 PLSCR1O15162 318 aa17.22■□□□□ 0.35
SMAD3-208ENST00000558827 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-208ENST00000558827 ANO8Q9HCE9 1232 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-208ENST00000558827 INSRP06213 1382 aa17.22■□□□□ 0.35
SMAD3-208ENST00000558827 FLT4P35916 1363 aa17.22■□□□□ 0.35
SMAD3-208ENST00000558827 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
SMAD3-208ENST00000558827 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
SMAD3-208ENST00000558827 RREB1Q92766 1687 aa17.21■□□□□ 0.35
SMAD3-208ENST00000558827 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
SMAD3-208ENST00000558827 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
SMAD3-208ENST00000558827 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
SMAD3-208ENST00000558827 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms