RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 PPIP5K1Q6PFW1 1433 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 KIF24Q5T7B8 1368 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 PREX1Q8TCU6 1659 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 DIP2CQ9Y2E4 1556 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 DDX11L8A8MPP1 907 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 BCAR3O75815 825 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 FCHSD2O94868 740 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 LETM1O95202 739 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-207ENST00000558335 TMEM132AQ24JP5 1023 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 FRAT1Q92837 279 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-207ENST00000558335 GCC1Q96CN9 775 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 CIZ1Q9ULV3 898 aaPredicted RBP6.84□□□□□ -1.31
GABPB1-207ENST00000558335 RICTORQ6R327 1708 aa6.84□□□□□ -1.31
GABPB1-207ENST00000558335 TULP4Q9NRJ4 1543 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 DIAPH1O60610 1272 aaKnown RBP6.83□□□□□ -1.32
GABPB1-207ENST00000558335 SKOR2Q2VWA4 1001 aaPredicted RBP6.83□□□□□ -1.32
GABPB1-207ENST00000558335 CHRDL2Q6WN34 429 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 OSCARQ8IYS5 282 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 RGS22Q8NE09 1264 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.83□□□□□ -1.32
GABPB1-207ENST00000558335 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 SMC4Q9NTJ3 1288 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 TMEM131LA2VDJ0 1609 aa6.83□□□□□ -1.32
GABPB1-207ENST00000558335 AGLP35573 1532 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 ZBTB22O15209 634 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 SRPK2P78362 688 aaKnown RBP6.82□□□□□ -1.32
GABPB1-207ENST00000558335 DMTNQ08495 405 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 GGT6Q6P531 493 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 ATF7IPQ6VMQ6 1270 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 HSCBQ8IWL3 235 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 SIRT1Q96EB6 747 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 TSPYL1Q9H0U9 437 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 SLC12A5Q9H2X9 1139 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 CHMP5Q9NZZ3 219 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 POGKQ9P215 609 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 PNPLA6Q8IY17 1366 aa6.82□□□□□ -1.32
GABPB1-207ENST00000558335 ARHGEF40Q8TER5 1519 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 TMPOP42166 694 aaKnown RBP6.81□□□□□ -1.32
GABPB1-207ENST00000558335 GNAI1P63096 354 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 FAM193AP78312 1265 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 PANK1Q8TE04 598 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 YY1AP1Q9H869 796 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 TMEM51Q9NW97 253 aa6.81□□□□□ -1.32
GABPB1-207ENST00000558335 YTHDC2Q9H6S0 1430 aaKnown RBP6.81□□□□□ -1.32
GABPB1-207ENST00000558335 CFAP65Q6ZU64 1925 aaKnown RBP6.8□□□□□ -1.32
GABPB1-207ENST00000558335 SENP3-EIF4A1A0A087X0R7 540 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 GOLGA6L22H0YM25 854 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 IGHDP01880 384 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 SMC5Q8IY18 1101 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 SNX21Q969T3 373 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 AKT1S1Q96B36 256 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 PSMD1Q99460 953 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 DNAJC2Q99543 621 aaKnown RBP6.8□□□□□ -1.32
GABPB1-207ENST00000558335 C22orf23Q9BZE7 217 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 SIGLEC1Q9BZZ2 1709 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 API5Q9BZZ5 524 aaKnown RBP6.8□□□□□ -1.32
GABPB1-207ENST00000558335 PDZRN3Q9UPQ7 1066 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 A0A1W2PP64 1363 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 AATKQ6ZMQ8 1374 aa6.8□□□□□ -1.32
GABPB1-207ENST00000558335 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
GABPB1-207ENST00000558335 PTPRMP28827 1452 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 KNDC1Q76NI1 1749 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 EDC4Q6P2E9 1401 aaKnown RBP6.79□□□□□ -1.32
GABPB1-207ENST00000558335 U2SURPO15042 1029 aaKnown RBP6.79□□□□□ -1.32
GABPB1-207ENST00000558335 APPP05067 770 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 NEUROD2Q15784 382 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 PPP4R3BQ5MIZ7 849 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 ITPRIPQ8IWB1 547 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 ZNF692Q9BU19 519 aaPredicted RBP6.79□□□□□ -1.32
GABPB1-207ENST00000558335 IFT57Q9NWB7 429 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 STAG3Q9UJ98 1225 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 ALKQ9UM73 1620 aa6.79□□□□□ -1.32
GABPB1-207ENST00000558335 CDK12Q9NYV4 1490 aaPredicted RBP6.79□□□□□ -1.32
GABPB1-207ENST00000558335 ATXN8OSP0DMR3 200 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 RBM25P49756 843 aaKnown RBP6.78□□□□□ -1.32
GABPB1-207ENST00000558335 RIPK4P57078 832 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 BMP2KLQ5H9B9 411 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 DNTTIP2Q5QJE6 756 aaKnown RBP6.78□□□□□ -1.32
GABPB1-207ENST00000558335 CNPY4Q8N129 248 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 PLEKHF1Q96S99 279 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 HDAC5Q9UQL6 1122 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 PIK3R4Q99570 1358 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 NLRP1Q9C000 1473 aa6.78□□□□□ -1.32
GABPB1-207ENST00000558335 SOS1Q07889 1333 aaPredicted RBP6.77□□□□□ -1.32
GABPB1-207ENST00000558335 FAM135BQ49AJ0 1406 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 ITSN1Q15811 1721 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 FRAT2O75474 233 aaPredicted RBP6.77□□□□□ -1.33
GABPB1-207ENST00000558335 MRE11P49959 708 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 NUCB1Q02818 461 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 EXOSC9Q06265 439 aaKnown RBP6.77□□□□□ -1.33
GABPB1-207ENST00000558335 NFE2L2Q16236 605 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 ZBTB40Q9NUA8 1239 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 GEMIN8Q9NWZ8 242 aaKnown RBP6.77□□□□□ -1.33
GABPB1-207ENST00000558335 PCDHB15Q9Y5E8 787 aa6.77□□□□□ -1.33
GABPB1-207ENST00000558335 USP19O94966 1318 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 PTCH1Q13635 1447 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 MYO5BQ9ULV0 1848 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms