RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.7
ZEB1-210ENST00000557827 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
ZEB1-210ENST00000557827 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
ZEB1-210ENST00000557827 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
ZEB1-210ENST00000557827 ATP1A2P50993 1020 aa10.64□□□□□ -0.71
ZEB1-210ENST00000557827 TAGLNQ01995 201 aaKnown RBP10.64□□□□□ -0.71
ZEB1-210ENST00000557827 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
ZEB1-210ENST00000557827 LARGE2Q8N3Y3 721 aa10.64□□□□□ -0.71
ZEB1-210ENST00000557827 OCSTAMPQ9BR26 566 aa10.64□□□□□ -0.71
ZEB1-210ENST00000557827 NOD1Q9Y239 953 aa10.64□□□□□ -0.71
ZEB1-210ENST00000557827 H3BRB1 525 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
ZEB1-210ENST00000557827 ICMTO60725 284 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 DKK1O94907 266 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 CTHP32929 405 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 PDXDC2PQ6P474 469 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 SREK1Q8WXA9 508 aaKnown RBP10.63□□□□□ -0.71
ZEB1-210ENST00000557827 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
ZEB1-210ENST00000557827 ANO2Q9NQ90 1003 aa10.63□□□□□ -0.71
ZEB1-210ENST00000557827 CXXC1Q9P0U4 656 aaPredicted RBP10.63□□□□□ -0.71
ZEB1-210ENST00000557827 ZNF211Q13398 564 aaPredicted RBP10.62□□□□□ -0.71
ZEB1-210ENST00000557827 OCLNQ16625 522 aa10.62□□□□□ -0.71
ZEB1-210ENST00000557827 PTPRNQ16849 979 aa10.62□□□□□ -0.71
ZEB1-210ENST00000557827 BRICD5Q6PL45 260 aa10.62□□□□□ -0.71
ZEB1-210ENST00000557827 CCDC125Q86Z20 511 aa10.62□□□□□ -0.71
ZEB1-210ENST00000557827 PRR14Q9BWN1 585 aa10.61□□□□□ -0.71
ZEB1-210ENST00000557827 SALL2Q9Y467 1007 aaPredicted RBP10.61□□□□□ -0.71
ZEB1-210ENST00000557827 JUNDP17535 347 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 MAPK1P28482 360 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 ZC3H6P61129 1189 aaKnown RBP10.6□□□□□ -0.71
ZEB1-210ENST00000557827 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 SIX5Q8N196 739 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 KIAA1024Q9UPX6 916 aa10.6□□□□□ -0.71
ZEB1-210ENST00000557827 RECKO95980 971 aa10.59□□□□□ -0.71
ZEB1-210ENST00000557827 SEC13P55735 322 aa10.59□□□□□ -0.71
ZEB1-210ENST00000557827 ARMC2Q8NEN0 867 aa10.59□□□□□ -0.71
ZEB1-210ENST00000557827 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
ZEB1-210ENST00000557827 ASB16Q96NS5 453 aa10.59□□□□□ -0.71
ZEB1-210ENST00000557827 ECM1Q16610 540 aa10.58□□□□□ -0.72
ZEB1-210ENST00000557827 DCTN4Q9UJW0 460 aa10.58□□□□□ -0.72
ZEB1-210ENST00000557827 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
ZEB1-210ENST00000557827 EMP3P54852 163 aa10.57□□□□□ -0.72
ZEB1-210ENST00000557827 ADAM32Q8TC27 787 aa10.57□□□□□ -0.72
ZEB1-210ENST00000557827 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
ZEB1-210ENST00000557827 C21orf2O43822 256 aa10.56□□□□□ -0.72
ZEB1-210ENST00000557827 DMRTA1Q5VZB9 504 aa10.56□□□□□ -0.72
ZEB1-210ENST00000557827 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
ZEB1-210ENST00000557827 ZSCAN29Q8IWY8 852 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-210ENST00000557827 GTF3C2Q8WUA4 911 aaPredicted RBP10.56□□□□□ -0.72
ZEB1-210ENST00000557827 NBPF3Q9H094 633 aa10.56□□□□□ -0.72
ZEB1-210ENST00000557827 EVA1BQ9NVM1 165 aa10.56□□□□□ -0.72
ZEB1-210ENST00000557827 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
ZEB1-210ENST00000557827 PBX2P40425 430 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 GTF2IP78347 998 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 THAP11Q96EK4 314 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
ZEB1-210ENST00000557827 CCDC85AQ96PX6 553 aaPredicted RBP10.55□□□□□ -0.72
ZEB1-210ENST00000557827 DOLKQ9UPQ8 538 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
ZEB1-210ENST00000557827 FKBP4Q02790 459 aaKnown RBP eCLIP10.54□□□□□ -0.72
ZEB1-210ENST00000557827 COL19A1Q14993 1142 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 TSNAXIP1Q2TAA8 658 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 NAALADL2Q58DX5 795 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 MARVELD3Q96A59 401 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 ARHGAP9Q9BRR9 750 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 SEPT3Q9UH03 358 aa10.54□□□□□ -0.72
ZEB1-210ENST00000557827 CCNYL3P0C7X3 344 aa10.53□□□□□ -0.72
ZEB1-210ENST00000557827 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
ZEB1-210ENST00000557827 NBPF14Q5TI25 921 aa10.53□□□□□ -0.72
ZEB1-210ENST00000557827 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
ZEB1-210ENST00000557827 BCL11AQ9H165 835 aa10.53□□□□□ -0.72
ZEB1-210ENST00000557827 DNMT3AQ9Y6K1 912 aaPredicted RBP10.53□□□□□ -0.72
ZEB1-210ENST00000557827 LGR5O75473 907 aa10.52□□□□□ -0.73
ZEB1-210ENST00000557827 ARHGAP4P98171 946 aa10.52□□□□□ -0.73
ZEB1-210ENST00000557827 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
ZEB1-210ENST00000557827 ZBTB33Q86T24 672 aa10.52□□□□□ -0.73
ZEB1-210ENST00000557827 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
ZEB1-210ENST00000557827 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
ZEB1-210ENST00000557827 PPP1R1BQ9UD71 204 aaPredicted RBP10.52□□□□□ -0.73
ZEB1-210ENST00000557827 SF3B2Q13435 895 aaKnown RBP10.51□□□□□ -0.73
ZEB1-210ENST00000557827 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
ZEB1-210ENST00000557827 UBXN4Q92575 508 aa10.51□□□□□ -0.73
ZEB1-210ENST00000557827 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
ZEB1-210ENST00000557827 CANXP27824 592 aaKnown RBP10.5□□□□□ -0.73
ZEB1-210ENST00000557827 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
ZEB1-210ENST00000557827 BACH2Q9BYV9 841 aa10.5□□□□□ -0.73
ZEB1-210ENST00000557827 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
ZEB1-210ENST00000557827 PCDHGA11Q9Y5H2 935 aa10.5□□□□□ -0.73
ZEB1-210ENST00000557827 BHMG1C9JSJ3 638 aaPredicted RBP10.49□□□□□ -0.73
ZEB1-210ENST00000557827 MTMR3Q13615 1198 aa10.49□□□□□ -0.73
ZEB1-210ENST00000557827 SF3A1Q15459 793 aaKnown RBP10.49□□□□□ -0.73
ZEB1-210ENST00000557827 CAPN12Q6ZSI9 719 aa10.49□□□□□ -0.73
ZEB1-210ENST00000557827 RGL4Q8IZJ4 473 aa10.49□□□□□ -0.73
ZEB1-210ENST00000557827 LRCH3Q96II8 777 aa10.49□□□□□ -0.73
ZEB1-210ENST00000557827 NUDT12Q9BQG2 462 aa10.49□□□□□ -0.73
ZEB1-210ENST00000557827 SMARCA5O60264 1052 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms