RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ACEP12821 1306 aa16.18■□□□□ 0.18
LINC00648-204ENST00000557749 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 NBPF8Q3BBV2 869 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 RGS12O14924 1447 aa16.17■□□□□ 0.18
LINC00648-204ENST00000557749 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
LINC00648-204ENST00000557749 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
LINC00648-204ENST00000557749 COL14A1Q05707 1796 aaKnown RBP16.14■□□□□ 0.17
LINC00648-204ENST00000557749 VPS72Q15906 364 aa16.14■□□□□ 0.17
LINC00648-204ENST00000557749 CABLES1Q8TDN4 633 aa16.14■□□□□ 0.17
LINC00648-204ENST00000557749 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
LINC00648-204ENST00000557749 PLCH1Q4KWH8 1693 aa16.12■□□□□ 0.17
LINC00648-204ENST00000557749 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
LINC00648-204ENST00000557749 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
LINC00648-204ENST00000557749 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
LINC00648-204ENST00000557749 RIOK3O14730 519 aaKnown RBP16.11■□□□□ 0.17
LINC00648-204ENST00000557749 USP6P35125 1406 aa16.11■□□□□ 0.17
LINC00648-204ENST00000557749 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
LINC00648-204ENST00000557749 PUS7Q96PZ0 661 aaKnown RBP16.1■□□□□ 0.17
LINC00648-204ENST00000557749 CABP1Q9NZU7 370 aa16.1■□□□□ 0.17
LINC00648-204ENST00000557749 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
LINC00648-204ENST00000557749 CRYBG1Q9Y4K1 1723 aa16.09■□□□□ 0.17
LINC00648-204ENST00000557749 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
LINC00648-204ENST00000557749 CLCN6P51797 869 aa16.09■□□□□ 0.17
LINC00648-204ENST00000557749 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
LINC00648-204ENST00000557749 BTG4Q9NY30 223 aa16.08■□□□□ 0.16
LINC00648-204ENST00000557749 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.16
LINC00648-204ENST00000557749 ZNF467Q7Z7K2 595 aaPredicted RBP16.07■□□□□ 0.16
LINC00648-204ENST00000557749 USP19O94966 1318 aa16.07■□□□□ 0.16
LINC00648-204ENST00000557749 TTC21AQ8NDW8 1320 aa16.07■□□□□ 0.16
LINC00648-204ENST00000557749 CPDO75976 1380 aa16.07■□□□□ 0.16
LINC00648-204ENST00000557749 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
LINC00648-204ENST00000557749 GLI3P10071 1580 aa16.05■□□□□ 0.16
LINC00648-204ENST00000557749 KIAA0232Q92628 1395 aa16.05■□□□□ 0.16
LINC00648-204ENST00000557749 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
LINC00648-204ENST00000557749 ONECUT3O60422 494 aaPredicted RBP16.04■□□□□ 0.16
LINC00648-204ENST00000557749 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
LINC00648-204ENST00000557749 NRKQ7Z2Y5 1582 aa16.04■□□□□ 0.16
LINC00648-204ENST00000557749 NLRP6P59044 892 aa16.03■□□□□ 0.16
LINC00648-204ENST00000557749 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
LINC00648-204ENST00000557749 TERF2IPQ9NYB0 399 aa16.03■□□□□ 0.16
LINC00648-204ENST00000557749 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.16
LINC00648-204ENST00000557749 SSH2Q76I76 1423 aa16.02■□□□□ 0.16
LINC00648-204ENST00000557749 KTN1Q86UP2 1357 aaKnown RBP16.02■□□□□ 0.16
LINC00648-204ENST00000557749 GCP02774 474 aa16.02■□□□□ 0.16
LINC00648-204ENST00000557749 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
LINC00648-204ENST00000557749 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
LINC00648-204ENST00000557749 AKAP12Q02952 1782 aa16.02■□□□□ 0.15
LINC00648-204ENST00000557749 SPATA31A5Q5VU36 1347 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 SPATA31A7Q8IWB4 1347 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 A0A0G2JS52 829 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 EVA1CP58658 441 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 ZC3H6P61129 1189 aaKnown RBP16.01■□□□□ 0.15
LINC00648-204ENST00000557749 MYT1Q01538 1121 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 SEPT12Q8IYM1 358 aa16.01■□□□□ 0.15
LINC00648-204ENST00000557749 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
LINC00648-204ENST00000557749 SLIT3O75094 1523 aa16■□□□□ 0.15
LINC00648-204ENST00000557749 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
LINC00648-204ENST00000557749 KRT27Q7Z3Y8 459 aa15.99■□□□□ 0.15
LINC00648-204ENST00000557749 TMC1Q8TDI8 760 aa15.99■□□□□ 0.15
LINC00648-204ENST00000557749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
LINC00648-204ENST00000557749 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
LINC00648-204ENST00000557749 TMF1P82094 1093 aa15.98■□□□□ 0.15
LINC00648-204ENST00000557749 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
LINC00648-204ENST00000557749 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
LINC00648-204ENST00000557749 BMP2KQ9NSY1 1161 aaPredicted RBP15.98■□□□□ 0.15
LINC00648-204ENST00000557749 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
LINC00648-204ENST00000557749 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
LINC00648-204ENST00000557749 USP47Q96K76 1375 aa15.98■□□□□ 0.15
LINC00648-204ENST00000557749 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
LINC00648-204ENST00000557749 EDC4Q6P2E9 1401 aaKnown RBP15.97■□□□□ 0.15
LINC00648-204ENST00000557749 ST20-MTHFSA0A0A6YYL1 179 aa15.97■□□□□ 0.15
LINC00648-204ENST00000557749 PSEN1P49768 467 aa15.97■□□□□ 0.15
LINC00648-204ENST00000557749 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
LINC00648-204ENST00000557749 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
LINC00648-204ENST00000557749 FAM98CQ17RN3 349 aaKnown RBP15.97■□□□□ 0.15
LINC00648-204ENST00000557749 STRN4Q9NRL3 753 aa15.97■□□□□ 0.15
LINC00648-204ENST00000557749 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
LINC00648-204ENST00000557749 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
LINC00648-204ENST00000557749 ABCC6O95255 1503 aa15.96■□□□□ 0.15
LINC00648-204ENST00000557749 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.15
LINC00648-204ENST00000557749 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
LINC00648-204ENST00000557749 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
LINC00648-204ENST00000557749 BARGINQ6ZT62 677 aa15.95■□□□□ 0.14
LINC00648-204ENST00000557749 TESK2Q96S53 571 aa15.95■□□□□ 0.14
LINC00648-204ENST00000557749 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
LINC00648-204ENST00000557749 CAMTA1Q9Y6Y1 1673 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 COL5A2P05997 1499 aaPredicted RBP15.93■□□□□ 0.14
LINC00648-204ENST00000557749 TTLL13PA6NNM8 815 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 TIE1P35590 1138 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 BRWD3Q6RI45 1802 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 CRB1P82279 1406 aa15.93■□□□□ 0.14
LINC00648-204ENST00000557749 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
LINC00648-204ENST00000557749 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
LINC00648-204ENST00000557749 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
LINC00648-204ENST00000557749 CD163L1Q9NR16 1453 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms