RNA–Protein interactions for RNA: ENST00000557557.1

PSMC6-216, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 2,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-216ENST00000557557 RPS6KL1Q9Y6S9 549 aa8.26□□□□□ -1.09
PSMC6-216ENST00000557557 URB2Q14146 1524 aaKnown RBP8.25□□□□□ -1.09
PSMC6-216ENST00000557557 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 TEX35Q5T0J7 233 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 MCTP2Q6DN12 878 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 FBXO38Q6PIJ6 1188 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 GPT2Q8TD30 523 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 AK9Q5TCS8 1911 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 KCNA4P22459 653 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 INHBEP58166 350 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 CASC1Q6TDU7 716 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 MORC1Q86VD1 984 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 NPC1L1Q9UHC9 1359 aa8.25□□□□□ -1.09
PSMC6-216ENST00000557557 NCOA3Q9Y6Q9 1424 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 CCDC112Q8NEF3 446 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 KIAA1524Q8TCG1 905 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 KIF1BPQ96EK5 621 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 CHAMP1Q96JM3 812 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 ANKRD65E5RJM6 399 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 NEBLO76041 1014 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 ADCY5O95622 1261 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 SMARCE1Q969G3 411 aa8.24□□□□□ -1.09
PSMC6-216ENST00000557557 BSDC1Q9NW68 430 aaPredicted RBP8.24□□□□□ -1.09
PSMC6-216ENST00000557557 CD2BP2O95400 341 aaKnown RBP8.23□□□□□ -1.09
PSMC6-216ENST00000557557 SYCP1Q15431 976 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 NSFL1CQ9UNZ2 370 aaKnown RBP8.23□□□□□ -1.09
PSMC6-216ENST00000557557 ARMC3Q5W041 872 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
PSMC6-216ENST00000557557 RAD50Q92878 1312 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 MAFGO15525 162 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 IPO7O95373 1038 aaKnown RBP8.23□□□□□ -1.09
PSMC6-216ENST00000557557 LIG1P18858 919 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 C11orf91Q3C1V1 193 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 PDS5BQ9NTI5 1447 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 FAM53CQ9NYF3 392 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 KNSTRNQ9Y448 316 aa8.23□□□□□ -1.09
PSMC6-216ENST00000557557 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
PSMC6-216ENST00000557557 TPM3P06753 285 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 MAGEA9P43362 315 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 ELF2Q15723 593 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 SWT1Q5T5J6 900 aaKnown RBP8.22□□□□□ -1.09
PSMC6-216ENST00000557557 SPC24Q8NBT2 197 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 TSPY26PQ9H489 355 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 EXOC6BQ9Y2D4 811 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 RTEL1-TNFRSF6BF6WH68 1400 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 TDRD9Q8NDG6 1382 aaKnown RBP8.22□□□□□ -1.09
PSMC6-216ENST00000557557 SMTNL1A8MU46 457 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
PSMC6-216ENST00000557557 MNAT1P51948 309 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 GPS2Q13227 327 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
PSMC6-216ENST00000557557 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
PSMC6-216ENST00000557557 KDM5BQ9UGL1 1544 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 PLEKHG2Q9H7P9 1386 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 CCDC196A0A1B0GTZ2 297 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 POLD1P28340 1107 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 PKP1Q13835 747 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 THOC1Q96FV9 657 aaKnown RBP8.21□□□□□ -1.09
PSMC6-216ENST00000557557 PAIP2Q9BPZ3 127 aaKnown RBP8.21□□□□□ -1.09
PSMC6-216ENST00000557557 ZNF215Q9UL58 517 aaPredicted RBP8.21□□□□□ -1.09
PSMC6-216ENST00000557557 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.09
PSMC6-216ENST00000557557 KIF3CO14782 793 aa8.21□□□□□ -1.1
PSMC6-216ENST00000557557 BCAR3O75815 825 aa8.21□□□□□ -1.1
PSMC6-216ENST00000557557 ECM2O94769 699 aaPredicted RBP8.21□□□□□ -1.1
PSMC6-216ENST00000557557 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
PSMC6-216ENST00000557557 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
PSMC6-216ENST00000557557 TRDNQ13061 729 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 MMS22LQ6ZRQ5 1243 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 MYBBP1AQ9BQG0 1328 aaKnown RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 EIF3CLB5ME19 914 aaKnown RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 C1QTNF12Q5T7M4 302 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 FOXD4L5Q5VV16 416 aaPredicted RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 CWC27Q6UX04 472 aaKnown RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 FOXD4L4Q8WXT5 416 aaPredicted RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 DNAAF4Q8WXU2 420 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 SNX21Q969T3 373 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 CLUAP1Q96AJ1 413 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 EIF3CQ99613 913 aaKnown RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 IFT57Q9NWB7 429 aa8.2□□□□□ -1.1
PSMC6-216ENST00000557557 CFAP65Q6ZU64 1925 aaKnown RBP8.2□□□□□ -1.1
PSMC6-216ENST00000557557 PAX7P23759 505 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 SUGP1Q8IWZ8 645 aaKnown RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 TMTC2Q8N394 836 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 FBXO18Q8NFZ0 1043 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 SCAPERQ9BY12 1400 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 BRD4O60885 1362 aaPredicted RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 K7ELQ4 463 aaPredicted RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 LMAN1P49257 510 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 NUCB2P80303 420 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 MTA1Q13330 715 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 TBC1D22AQ8WUA7 517 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 PPM1EQ8WY54 764 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 CEP89Q96ST8 783 aa8.19□□□□□ -1.1
PSMC6-216ENST00000557557 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
PSMC6-216ENST00000557557 CTAGE5O15320 804 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms