RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-221ENST00000556571 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
ACTN1-221ENST00000556571 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
ACTN1-221ENST00000556571 BCL9O00512 1426 aa17.13■□□□□ 0.33
ACTN1-221ENST00000556571 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
ACTN1-221ENST00000556571 PROM2Q8N271 834 aa17.12■□□□□ 0.33
ACTN1-221ENST00000556571 CARD10Q9BWT7 1032 aa17.12■□□□□ 0.33
ACTN1-221ENST00000556571 EXOC5O00471 708 aa17.1■□□□□ 0.33
ACTN1-221ENST00000556571 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
ACTN1-221ENST00000556571 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
ACTN1-221ENST00000556571 CPSF1Q10570 1443 aaKnown RBP17.1■□□□□ 0.33
ACTN1-221ENST00000556571 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-221ENST00000556571 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
ACTN1-221ENST00000556571 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
ACTN1-221ENST00000556571 ZBTB7AO95365 584 aa17.08■□□□□ 0.32
ACTN1-221ENST00000556571 TXNRD1Q16881 649 aa17.08■□□□□ 0.32
ACTN1-221ENST00000556571 PDGFDQ9GZP0 370 aaPredicted RBP17.08■□□□□ 0.32
ACTN1-221ENST00000556571 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
ACTN1-221ENST00000556571 COL18A1P39060 1754 aa17.07■□□□□ 0.32
ACTN1-221ENST00000556571 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
ACTN1-221ENST00000556571 SOX12O15370 315 aa17.07■□□□□ 0.32
ACTN1-221ENST00000556571 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
ACTN1-221ENST00000556571 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
ACTN1-221ENST00000556571 PTGER2P43116 358 aa17.06■□□□□ 0.32
ACTN1-221ENST00000556571 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
ACTN1-221ENST00000556571 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
ACTN1-221ENST00000556571 CCDC7Q96M83 1385 aa17.05■□□□□ 0.32
ACTN1-221ENST00000556571 PIK3C2AO00443 1686 aa17.05■□□□□ 0.32
ACTN1-221ENST00000556571 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-221ENST00000556571 CASZ1Q86V15 1759 aa17.03■□□□□ 0.32
ACTN1-221ENST00000556571 MTFR1LQ9H019 292 aa17.02■□□□□ 0.32
ACTN1-221ENST00000556571 KTN1Q86UP2 1357 aaKnown RBP17.02■□□□□ 0.31
ACTN1-221ENST00000556571 SYT17Q9BSW7 474 aa17.01■□□□□ 0.31
ACTN1-221ENST00000556571 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
ACTN1-221ENST00000556571 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
ACTN1-221ENST00000556571 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
ACTN1-221ENST00000556571 TNS2Q63HR2 1409 aa16.99■□□□□ 0.31
ACTN1-221ENST00000556571 WNK3Q9BYP7 1800 aa16.99■□□□□ 0.31
ACTN1-221ENST00000556571 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
ACTN1-221ENST00000556571 AKAP12Q02952 1782 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 NFAT5O94916 1531 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 ABCC6O95255 1503 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
ACTN1-221ENST00000556571 ACSBG1Q96GR2 724 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 USP31Q70CQ4 1352 aa16.98■□□□□ 0.31
ACTN1-221ENST00000556571 ERBB3P21860 1342 aa16.97■□□□□ 0.31
ACTN1-221ENST00000556571 IL2RBP14784 551 aa16.97■□□□□ 0.31
ACTN1-221ENST00000556571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.97■□□□□ 0.31
ACTN1-221ENST00000556571 UTRNP46939 3433 aa16.96■□□□□ 0.31
ACTN1-221ENST00000556571 ARXQ96QS3 562 aa16.96■□□□□ 0.31
ACTN1-221ENST00000556571 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
ACTN1-221ENST00000556571 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
ACTN1-221ENST00000556571 MYOM1P52179 1685 aa16.95■□□□□ 0.3
ACTN1-221ENST00000556571 NEUROD1Q13562 356 aa16.94■□□□□ 0.3
ACTN1-221ENST00000556571 NME9Q86XW9 330 aa16.94■□□□□ 0.3
ACTN1-221ENST00000556571 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
ACTN1-221ENST00000556571 SBNO2Q9Y2G9 1366 aa16.92■□□□□ 0.3
ACTN1-221ENST00000556571 HDGFL2Q7Z4V5 671 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-221ENST00000556571 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
ACTN1-221ENST00000556571 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
ACTN1-221ENST00000556571 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
ACTN1-221ENST00000556571 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
ACTN1-221ENST00000556571 SLC16A10Q8TF71 515 aa16.9■□□□□ 0.3
ACTN1-221ENST00000556571 LRRC4BQ9NT99 713 aa16.9■□□□□ 0.3
ACTN1-221ENST00000556571 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
ACTN1-221ENST00000556571 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
ACTN1-221ENST00000556571 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
ACTN1-221ENST00000556571 AKT1S1Q96B36 256 aa16.88■□□□□ 0.29
ACTN1-221ENST00000556571 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
ACTN1-221ENST00000556571 TERF2IPQ9NYB0 399 aa16.88■□□□□ 0.29
ACTN1-221ENST00000556571 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
ACTN1-221ENST00000556571 GPR162Q16538 588 aa16.87■□□□□ 0.29
ACTN1-221ENST00000556571 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
ACTN1-221ENST00000556571 IP6K1Q92551 441 aa16.87■□□□□ 0.29
ACTN1-221ENST00000556571 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
ACTN1-221ENST00000556571 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
ACTN1-221ENST00000556571 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
ACTN1-221ENST00000556571 POLD1P28340 1107 aa16.86■□□□□ 0.29
ACTN1-221ENST00000556571 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
ACTN1-221ENST00000556571 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
ACTN1-221ENST00000556571 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
ACTN1-221ENST00000556571 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
ACTN1-221ENST00000556571 BTAF1O14981 1849 aa16.84■□□□□ 0.29
ACTN1-221ENST00000556571 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
ACTN1-221ENST00000556571 PNPLA7Q6ZV29 1317 aa16.83■□□□□ 0.28
ACTN1-221ENST00000556571 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
ACTN1-221ENST00000556571 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-221ENST00000556571 CHD4Q14839 1912 aa16.82■□□□□ 0.28
ACTN1-221ENST00000556571 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
ACTN1-221ENST00000556571 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
ACTN1-221ENST00000556571 SYTL4Q96C24 671 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-221ENST00000556571 LTN1O94822 1766 aa16.81■□□□□ 0.28
ACTN1-221ENST00000556571 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
ACTN1-221ENST00000556571 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
ACTN1-221ENST00000556571 COG3Q96JB2 828 aa16.8■□□□□ 0.28
ACTN1-221ENST00000556571 AMPHP49418 695 aa16.79■□□□□ 0.28
ACTN1-221ENST00000556571 KCNQ4P56696 695 aa16.79■□□□□ 0.28
ACTN1-221ENST00000556571 PELP1Q8IZL8 1130 aaKnown RBP16.79■□□□□ 0.28
ACTN1-221ENST00000556571 MAP3K19Q56UN5 1328 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms