RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 COL18A1P39060 1754 aa31.94■■■□□ 2.7
ACTN1-220ENST00000556433 CSB-PGBD3P0DP91 1061 aa31.94■■■□□ 2.7
ACTN1-220ENST00000556433 R3HDM1Q15032 1099 aaKnown RBP31.92■■■□□ 2.7
ACTN1-220ENST00000556433 DDB1Q16531 1140 aa31.92■■■□□ 2.7
ACTN1-220ENST00000556433 NME9Q86XW9 330 aa31.92■■■□□ 2.7
ACTN1-220ENST00000556433 PUS7Q96PZ0 661 aaKnown RBP31.92■■■□□ 2.7
ACTN1-220ENST00000556433 C11orf95C9JLR9 678 aaPredicted RBP31.91■■■□□ 2.7
ACTN1-220ENST00000556433 USP31Q70CQ4 1352 aa31.91■■■□□ 2.7
ACTN1-220ENST00000556433 CD163L1Q9NR16 1453 aa31.91■■■□□ 2.7
ACTN1-220ENST00000556433 ST20-MTHFSA0A0A6YYL1 179 aa31.9■■■□□ 2.7
ACTN1-220ENST00000556433 TERF2IPQ9NYB0 399 aa31.9■■■□□ 2.7
ACTN1-220ENST00000556433 CARD10Q9BWT7 1032 aa31.89■■■□□ 2.7
ACTN1-220ENST00000556433 PARP4Q9UKK3 1724 aaKnown RBP31.89■■■□□ 2.69
ACTN1-220ENST00000556433 CDCA7Q9BWT1 371 aaPredicted RBP31.88■■■□□ 2.69
ACTN1-220ENST00000556433 PARD3Q8TEW0 1356 aa31.88■■■□□ 2.69
ACTN1-220ENST00000556433 MON2Q7Z3U7 1717 aa31.87■■■□□ 2.69
ACTN1-220ENST00000556433 TESK2Q96S53 571 aa31.87■■■□□ 2.69
ACTN1-220ENST00000556433 NFAT5O94916 1531 aa31.86■■■□□ 2.69
ACTN1-220ENST00000556433 OVOS2A0A0G2JMS6 1433 aa31.83■■■□□ 2.69
ACTN1-220ENST00000556433 OVOS2A0A0J9YW53 1432 aa31.83■■■□□ 2.69
ACTN1-220ENST00000556433 OVOS2Q6IE36 1432 aa31.83■■■□□ 2.69
ACTN1-220ENST00000556433 SLC24A1O60721 1099 aa31.83■■■□□ 2.69
ACTN1-220ENST00000556433 EDC4Q6P2E9 1401 aaKnown RBP31.83■■■□□ 2.69
ACTN1-220ENST00000556433 A0A1W2PP64 1363 aa31.82■■■□□ 2.69
ACTN1-220ENST00000556433 RGPD5Q99666 1765 aa31.81■■■□□ 2.68
ACTN1-220ENST00000556433 MARCH10Q8NA82 808 aaPredicted RBP31.81■■■□□ 2.68
ACTN1-220ENST00000556433 EXOC5O00471 708 aa31.79■■■□□ 2.68
ACTN1-220ENST00000556433 NBPF14Q5TI25 921 aa31.79■■■□□ 2.68
ACTN1-220ENST00000556433 CCDC7Q96M83 1385 aa31.78■■■□□ 2.68
ACTN1-220ENST00000556433 LRRC37A3O60309 1634 aa31.78■■■□□ 2.68
ACTN1-220ENST00000556433 LRP5O75197 1615 aa31.76■■■□□ 2.67
ACTN1-220ENST00000556433 NLRP2Q9NX02 1062 aa31.76■■■□□ 2.67
ACTN1-220ENST00000556433 ABCC6O95255 1503 aa31.75■■■□□ 2.67
ACTN1-220ENST00000556433 BCL11BQ9C0K0 894 aaPredicted RBP31.75■■■□□ 2.67
ACTN1-220ENST00000556433 NINLQ9Y2I6 1382 aa31.75■■■□□ 2.67
ACTN1-220ENST00000556433 PEAK1Q9H792 1746 aa31.75■■■□□ 2.67
ACTN1-220ENST00000556433 ERBB3P21860 1342 aa31.74■■■□□ 2.67
ACTN1-220ENST00000556433 PTF1AQ7RTS3 328 aa31.73■■■□□ 2.67
ACTN1-220ENST00000556433 USP54Q70EL1 1684 aa31.73■■■□□ 2.67
ACTN1-220ENST00000556433 PLSCR1O15162 318 aa31.72■■■□□ 2.67
ACTN1-220ENST00000556433 ANKRD24Q8TF21 1146 aa31.72■■■□□ 2.67
ACTN1-220ENST00000556433 TMF1P82094 1093 aa31.7■■■□□ 2.67
ACTN1-220ENST00000556433 WNK3Q9BYP7 1800 aa31.69■■■□□ 2.66
ACTN1-220ENST00000556433 USP47Q96K76 1375 aa31.68■■■□□ 2.66
ACTN1-220ENST00000556433 BCL9O00512 1426 aa31.68■■■□□ 2.66
ACTN1-220ENST00000556433 RREB1Q92766 1687 aa31.68■■■□□ 2.66
ACTN1-220ENST00000556433 COG3Q96JB2 828 aa31.68■■■□□ 2.66
ACTN1-220ENST00000556433 IP6K1Q92551 441 aa31.67■■■□□ 2.66
ACTN1-220ENST00000556433 IL2RBP14784 551 aa31.66■■■□□ 2.66
ACTN1-220ENST00000556433 NUP188Q5SRE5 1749 aa31.66■■■□□ 2.66
ACTN1-220ENST00000556433 SBF2Q86WG5 1849 aa31.65■■■□□ 2.66
ACTN1-220ENST00000556433 LTN1O94822 1766 aa31.64■■■□□ 2.66
ACTN1-220ENST00000556433 LTV1Q96GA3 475 aaPredicted RBP31.63■■■□□ 2.65
ACTN1-220ENST00000556433 PCGF6Q9BYE7 350 aa31.63■■■□□ 2.65
ACTN1-220ENST00000556433 ANKRD36BQ8N2N9 1353 aa31.63■■■□□ 2.65
ACTN1-220ENST00000556433 TNS2Q63HR2 1409 aa31.62■■■□□ 2.65
ACTN1-220ENST00000556433 FBLN1P23142 703 aa31.61■■■□□ 2.65
ACTN1-220ENST00000556433 TIMELESSQ9UNS1 1208 aa31.61■■■□□ 2.65
ACTN1-220ENST00000556433 PROM2Q8N271 834 aa31.6■■■□□ 2.65
ACTN1-220ENST00000556433 MAP3K19Q56UN5 1328 aa31.59■■■□□ 2.65
ACTN1-220ENST00000556433 KCNQ2O43526 872 aa31.59■■■□□ 2.65
ACTN1-220ENST00000556433 AMPHP49418 695 aa31.59■■■□□ 2.65
ACTN1-220ENST00000556433 CDCA8Q53HL2 280 aa31.59■■■□□ 2.65
ACTN1-220ENST00000556433 ACSBG1Q96GR2 724 aa31.57■■■□□ 2.64
ACTN1-220ENST00000556433 FYB1O15117 783 aa31.56■■■□□ 2.64
ACTN1-220ENST00000556433 HOXC9P31274 260 aa31.56■■■□□ 2.64
ACTN1-220ENST00000556433 GGNBP2Q9H3C7 697 aa31.55■■■□□ 2.64
ACTN1-220ENST00000556433 ANO8Q9HCE9 1232 aaPredicted RBP31.55■■■□□ 2.64
ACTN1-220ENST00000556433 TXNRD1Q16881 649 aa31.54■■■□□ 2.64
ACTN1-220ENST00000556433 RGPD3A6NKT7 1758 aaPredicted RBP31.53■■■□□ 2.64
ACTN1-220ENST00000556433 RGPD4Q7Z3J3 1758 aa31.53■■■□□ 2.64
ACTN1-220ENST00000556433 SPON1Q9HCB6 807 aa31.53■■■□□ 2.64
ACTN1-220ENST00000556433 CLSPNQ9HAW4 1339 aa31.52■■■□□ 2.64
ACTN1-220ENST00000556433 RRS1Q15050 365 aaKnown RBP31.5■■■□□ 2.63
ACTN1-220ENST00000556433 DDX54Q8TDD1 881 aaKnown RBP31.49■■■□□ 2.63
ACTN1-220ENST00000556433 STK32BQ9NY57 414 aa31.47■■■□□ 2.63
ACTN1-220ENST00000556433 PPP1R1BQ9UD71 204 aaPredicted RBP31.45■■■□□ 2.63
ACTN1-220ENST00000556433 CARD14Q9BXL6 1004 aa31.44■■■□□ 2.62
ACTN1-220ENST00000556433 SLC15A2Q16348 729 aa31.43■■■□□ 2.62
ACTN1-220ENST00000556433 PDGFDQ9GZP0 370 aaPredicted RBP31.43■■■□□ 2.62
ACTN1-220ENST00000556433 RTL1A6NKG5 1358 aa31.43■■■□□ 2.62
ACTN1-220ENST00000556433 KAT6BQ8WYB5 2073 aa31.42■■■□□ 2.62
ACTN1-220ENST00000556433 NHSQ6T4R5 1651 aa31.41■■■□□ 2.62
ACTN1-220ENST00000556433 NBPF6Q5VWK0 638 aa31.4■■■□□ 2.62
ACTN1-220ENST00000556433 NBPF4Q96M43 638 aa31.4■■■□□ 2.62
ACTN1-220ENST00000556433 FAM208AQ9UK61 1670 aaKnown RBP31.4■■■□□ 2.62
ACTN1-220ENST00000556433 ZCRB1Q8TBF4 217 aaKnown RBP31.39■■■□□ 2.62
ACTN1-220ENST00000556433 ZBTB7AO95365 584 aa31.37■■■□□ 2.61
ACTN1-220ENST00000556433 HSP90AB2PQ58FF8 381 aa31.37■■■□□ 2.61
ACTN1-220ENST00000556433 USHBP1Q8N6Y0 703 aa31.36■■■□□ 2.61
ACTN1-220ENST00000556433 NSD3Q9BZ95 1437 aa31.35■■■□□ 2.61
ACTN1-220ENST00000556433 SMG6Q86US8 1419 aaKnown RBP31.34■■■□□ 2.61
ACTN1-220ENST00000556433 SYTL4Q96C24 671 aaPredicted RBP31.34■■■□□ 2.61
ACTN1-220ENST00000556433 POLR3GLQ9BT43 218 aa31.34■■■□□ 2.61
ACTN1-220ENST00000556433 INSRP06213 1382 aa31.33■■■□□ 2.61
ACTN1-220ENST00000556433 PRIM1P49642 420 aaKnown RBP31.33■■■□□ 2.61
ACTN1-220ENST00000556433 RAPGEF4Q8WZA2 1011 aa31.33■■■□□ 2.61
ACTN1-220ENST00000556433 ATF5Q9Y2D1 282 aaPredicted RBP31.33■■■□□ 2.61
ACTN1-220ENST00000556433 MEGF6O75095 1541 aa31.32■■■□□ 2.6
ACTN1-220ENST00000556433 RGPD2P0DJD1 1756 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms