RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
ACTN1-219ENST00000556432 PTGER2P43116 358 aa20.25■□□□□ 0.83
ACTN1-219ENST00000556432 MARCH10Q8NA82 808 aaPredicted RBP20.25■□□□□ 0.83
ACTN1-219ENST00000556432 FHDC1Q9C0D6 1143 aaPredicted RBP20.25■□□□□ 0.83
ACTN1-219ENST00000556432 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
ACTN1-219ENST00000556432 PROM2Q8N271 834 aa20.24■□□□□ 0.83
ACTN1-219ENST00000556432 CDCA7Q9BWT1 371 aaPredicted RBP20.24■□□□□ 0.83
ACTN1-219ENST00000556432 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
ACTN1-219ENST00000556432 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-219ENST00000556432 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
ACTN1-219ENST00000556432 CENPJQ9HC77 1338 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-219ENST00000556432 USP6P35125 1406 aa20.22■□□□□ 0.83
ACTN1-219ENST00000556432 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
ACTN1-219ENST00000556432 SYT17Q9BSW7 474 aa20.22■□□□□ 0.83
ACTN1-219ENST00000556432 CABP1Q9NZU7 370 aa20.22■□□□□ 0.83
ACTN1-219ENST00000556432 SOX12O15370 315 aa20.21■□□□□ 0.83
ACTN1-219ENST00000556432 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
ACTN1-219ENST00000556432 SLIT3O75094 1523 aa20.21■□□□□ 0.83
ACTN1-219ENST00000556432 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
ACTN1-219ENST00000556432 NBPF1Q3BBV0 1214 aa20.2■□□□□ 0.82
ACTN1-219ENST00000556432 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
ACTN1-219ENST00000556432 AXIN2Q9Y2T1 843 aa20.2■□□□□ 0.82
ACTN1-219ENST00000556432 KIAA1210Q9ULL0 1709 aa20.19■□□□□ 0.82
ACTN1-219ENST00000556432 BCL9O00512 1426 aa20.19■□□□□ 0.82
ACTN1-219ENST00000556432 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
ACTN1-219ENST00000556432 EXOC5O00471 708 aa20.18■□□□□ 0.82
ACTN1-219ENST00000556432 CARD10Q9BWT7 1032 aa20.17■□□□□ 0.82
ACTN1-219ENST00000556432 UTRNP46939 3433 aa20.17■□□□□ 0.82
ACTN1-219ENST00000556432 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
ACTN1-219ENST00000556432 COL18A1P39060 1754 aa20.16■□□□□ 0.82
ACTN1-219ENST00000556432 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
ACTN1-219ENST00000556432 ARXQ96QS3 562 aa20.15■□□□□ 0.82
ACTN1-219ENST00000556432 QRICH2Q9H0J4 1663 aa20.15■□□□□ 0.82
ACTN1-219ENST00000556432 ARHGEF25Q86VW2 580 aa20.14■□□□□ 0.81
ACTN1-219ENST00000556432 KCNH5Q8NCM2 988 aa20.14■□□□□ 0.81
ACTN1-219ENST00000556432 CHD4Q14839 1912 aa20.14■□□□□ 0.81
ACTN1-219ENST00000556432 ACSBG1Q96GR2 724 aa20.13■□□□□ 0.81
ACTN1-219ENST00000556432 TNS2Q63HR2 1409 aa20.12■□□□□ 0.81
ACTN1-219ENST00000556432 GPR162Q16538 588 aa20.12■□□□□ 0.81
ACTN1-219ENST00000556432 KLHL34Q8N239 644 aa20.12■□□□□ 0.81
ACTN1-219ENST00000556432 SGIP1Q9BQI5 828 aa20.12■□□□□ 0.81
ACTN1-219ENST00000556432 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
ACTN1-219ENST00000556432 RGPD5Q99666 1765 aa20.11■□□□□ 0.81
ACTN1-219ENST00000556432 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
ACTN1-219ENST00000556432 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
ACTN1-219ENST00000556432 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
ACTN1-219ENST00000556432 NHSQ6T4R5 1651 aa20.08■□□□□ 0.81
ACTN1-219ENST00000556432 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
ACTN1-219ENST00000556432 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
ACTN1-219ENST00000556432 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
ACTN1-219ENST00000556432 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-219ENST00000556432 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
ACTN1-219ENST00000556432 TTC21AQ8NDW8 1320 aa20.05■□□□□ 0.8
ACTN1-219ENST00000556432 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
ACTN1-219ENST00000556432 NFAT5O94916 1531 aa20.04■□□□□ 0.8
ACTN1-219ENST00000556432 ABCC6O95255 1503 aa20.04■□□□□ 0.8
ACTN1-219ENST00000556432 POLD1P28340 1107 aa20.03■□□□□ 0.8
ACTN1-219ENST00000556432 KAT6BQ8WYB5 2073 aa20.03■□□□□ 0.8
ACTN1-219ENST00000556432 PAPPAQ13219 1627 aa20.02■□□□□ 0.8
ACTN1-219ENST00000556432 IL2RBP14784 551 aa20.02■□□□□ 0.8
ACTN1-219ENST00000556432 KTN1Q86UP2 1357 aaKnown RBP20.02■□□□□ 0.8
ACTN1-219ENST00000556432 BTAF1O14981 1849 aa20.01■□□□□ 0.79
ACTN1-219ENST00000556432 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
ACTN1-219ENST00000556432 LRRC4BQ9NT99 713 aa20■□□□□ 0.79
ACTN1-219ENST00000556432 ERBB3P21860 1342 aa20■□□□□ 0.79
ACTN1-219ENST00000556432 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
ACTN1-219ENST00000556432 SLC16A10Q8TF71 515 aa19.97■□□□□ 0.79
ACTN1-219ENST00000556432 TFCP2L1Q9NZI6 479 aa19.97■□□□□ 0.79
ACTN1-219ENST00000556432 ANKRD24Q8TF21 1146 aa19.96■□□□□ 0.79
ACTN1-219ENST00000556432 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
ACTN1-219ENST00000556432 DDX54Q8TDD1 881 aaKnown RBP19.95■□□□□ 0.78
ACTN1-219ENST00000556432 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
ACTN1-219ENST00000556432 SYTL4Q96C24 671 aaPredicted RBP19.95■□□□□ 0.78
ACTN1-219ENST00000556432 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.78
ACTN1-219ENST00000556432 NLGN2Q8NFZ4 835 aa19.94■□□□□ 0.78
ACTN1-219ENST00000556432 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
ACTN1-219ENST00000556432 GOLGB1Q14789 3259 aaKnown RBP19.94■□□□□ 0.78
ACTN1-219ENST00000556432 KCNQ4P56696 695 aa19.93■□□□□ 0.78
ACTN1-219ENST00000556432 NME9Q86XW9 330 aa19.93■□□□□ 0.78
ACTN1-219ENST00000556432 MSH5O43196 834 aa19.92■□□□□ 0.78
ACTN1-219ENST00000556432 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
ACTN1-219ENST00000556432 LTN1O94822 1766 aa19.91■□□□□ 0.78
ACTN1-219ENST00000556432 CEP350Q5VT06 3117 aa19.91■□□□□ 0.78
ACTN1-219ENST00000556432 MON2Q7Z3U7 1717 aa19.9■□□□□ 0.78
ACTN1-219ENST00000556432 LTV1Q96GA3 475 aaPredicted RBP19.9■□□□□ 0.78
ACTN1-219ENST00000556432 USP31Q70CQ4 1352 aa19.9■□□□□ 0.78
ACTN1-219ENST00000556432 SHANK3Q9BYB0 1731 aa19.9■□□□□ 0.78
ACTN1-219ENST00000556432 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
ACTN1-219ENST00000556432 TMC1Q8TDI8 760 aa19.89■□□□□ 0.77
ACTN1-219ENST00000556432 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
ACTN1-219ENST00000556432 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
ACTN1-219ENST00000556432 HDGFL2Q7Z4V5 671 aaPredicted RBP19.88■□□□□ 0.77
ACTN1-219ENST00000556432 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■□□□□ 10
ACTN1-219ENST00000556432 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
ACTN1-219ENST00000556432 SBNO2Q9Y2G9 1366 aa19.85■□□□□ 0.77
ACTN1-219ENST00000556432 CCNL1Q9UK58 526 aaPredicted RBP19.85■□□□□ 0.77
ACTN1-219ENST00000556432 USP54Q70EL1 1684 aa19.84■□□□□ 0.77
ACTN1-219ENST00000556432 MSL1Q68DK7 614 aa19.84■□□□□ 0.77
ACTN1-219ENST00000556432 ATP10DQ9P241 1426 aa19.84■□□□□ 0.77
ACTN1-219ENST00000556432 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms