RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 TRPM1Q7Z4N2 1603 aa22.19■■□□□ 1.14
SUPT16H-205ENST00000556217 COL18A1P39060 1754 aa22.19■■□□□ 1.14
SUPT16H-205ENST00000556217 WNK3Q9BYP7 1800 aa22.18■■□□□ 1.14
SUPT16H-205ENST00000556217 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
SUPT16H-205ENST00000556217 ZNF692Q9BU19 519 aaPredicted RBP22.18■■□□□ 1.14
SUPT16H-205ENST00000556217 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
SUPT16H-205ENST00000556217 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
SUPT16H-205ENST00000556217 PLSCR1O15162 318 aa22.16■■□□□ 1.14
SUPT16H-205ENST00000556217 KCNH5Q8NCM2 988 aa22.16■■□□□ 1.14
SUPT16H-205ENST00000556217 AKAP12Q02952 1782 aa22.16■■□□□ 1.14
SUPT16H-205ENST00000556217 CPSF1Q10570 1443 aaKnown RBP22.15■■□□□ 1.14
SUPT16H-205ENST00000556217 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
SUPT16H-205ENST00000556217 BCL11BQ9C0K0 894 aaPredicted RBP22.14■■□□□ 1.13
SUPT16H-205ENST00000556217 RGPD5Q99666 1765 aa22.14■■□□□ 1.13
SUPT16H-205ENST00000556217 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SUPT16H-205ENST00000556217 TTC21BQ7Z4L5 1316 aa22.12■■□□□ 1.13
SUPT16H-205ENST00000556217 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
SUPT16H-205ENST00000556217 ARHGEF25Q86VW2 580 aa22.12■■□□□ 1.13
SUPT16H-205ENST00000556217 AXIN2Q9Y2T1 843 aa22.12■■□□□ 1.13
SUPT16H-205ENST00000556217 CSB-PGBD3P0DP91 1061 aa22.11■■□□□ 1.13
SUPT16H-205ENST00000556217 ANO8Q9HCE9 1232 aaPredicted RBP22.11■■□□□ 1.13
SUPT16H-205ENST00000556217 BCL9O00512 1426 aa22.1■■□□□ 1.13
SUPT16H-205ENST00000556217 ZBTB7AO95365 584 aa22.1■■□□□ 1.13
SUPT16H-205ENST00000556217 CARD10Q9BWT7 1032 aa22.1■■□□□ 1.13
SUPT16H-205ENST00000556217 CASZ1Q86V15 1759 aa22.1■■□□□ 1.13
SUPT16H-205ENST00000556217 SOX12O15370 315 aa22.09■■□□□ 1.13
SUPT16H-205ENST00000556217 C1QTNF8P60827 252 aa22.09■■□□□ 1.13
SUPT16H-205ENST00000556217 UTRNP46939 3433 aa22.09■■□□□ 1.13
SUPT16H-205ENST00000556217 PTGER2P43116 358 aa22.08■■□□□ 1.13
SUPT16H-205ENST00000556217 MARCH10Q8NA82 808 aaPredicted RBP22.08■■□□□ 1.13
SUPT16H-205ENST00000556217 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.12
SUPT16H-205ENST00000556217 ABCC6O95255 1503 aa22.07■■□□□ 1.12
SUPT16H-205ENST00000556217 IFFO2Q5TF58 517 aa22.07■■□□□ 1.12
SUPT16H-205ENST00000556217 PDGFDQ9GZP0 370 aaPredicted RBP22.07■■□□□ 1.12
SUPT16H-205ENST00000556217 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
SUPT16H-205ENST00000556217 CHD4Q14839 1912 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 EXOC5O00471 708 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 MON2Q7Z3U7 1717 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 NFAT5O94916 1531 aa22.06■■□□□ 1.12
SUPT16H-205ENST00000556217 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
SUPT16H-205ENST00000556217 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
SUPT16H-205ENST00000556217 PTF1AQ7RTS3 328 aa22.04■■□□□ 1.12
SUPT16H-205ENST00000556217 FHDC1Q9C0D6 1143 aaPredicted RBP22.04■■□□□ 1.12
SUPT16H-205ENST00000556217 MYOM1P52179 1685 aa22.04■■□□□ 1.12
SUPT16H-205ENST00000556217 PROM2Q8N271 834 aa22.03■■□□□ 1.12
SUPT16H-205ENST00000556217 STK32BQ9NY57 414 aa22.03■■□□□ 1.12
SUPT16H-205ENST00000556217 SBNO2Q9Y2G9 1366 aa22■■□□□ 1.11
SUPT16H-205ENST00000556217 TNS2Q63HR2 1409 aa22■■□□□ 1.11
SUPT16H-205ENST00000556217 USP54Q70EL1 1684 aa22■■□□□ 1.11
SUPT16H-205ENST00000556217 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
SUPT16H-205ENST00000556217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.99■■□□□ 1.11
SUPT16H-205ENST00000556217 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
SUPT16H-205ENST00000556217 LTN1O94822 1766 aa21.99■■□□□ 1.11
SUPT16H-205ENST00000556217 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
SUPT16H-205ENST00000556217 SLC15A2Q16348 729 aa21.98■■□□□ 1.11
SUPT16H-205ENST00000556217 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
SUPT16H-205ENST00000556217 NLRP2Q9NX02 1062 aa21.96■■□□□ 1.11
SUPT16H-205ENST00000556217 HDGFL2Q7Z4V5 671 aaPredicted RBP21.95■■□□□ 1.1
SUPT16H-205ENST00000556217 ERBB3P21860 1342 aa21.95■■□□□ 1.1
SUPT16H-205ENST00000556217 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
SUPT16H-205ENST00000556217 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
SUPT16H-205ENST00000556217 SGIP1Q9BQI5 828 aa21.94■■□□□ 1.1
SUPT16H-205ENST00000556217 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
SUPT16H-205ENST00000556217 IL2RBP14784 551 aa21.93■■□□□ 1.1
SUPT16H-205ENST00000556217 NME9Q86XW9 330 aa21.93■■□□□ 1.1
SUPT16H-205ENST00000556217 ARXQ96QS3 562 aa21.93■■□□□ 1.1
SUPT16H-205ENST00000556217 CD163L1Q9NR16 1453 aa21.92■■□□□ 1.1
SUPT16H-205ENST00000556217 GIGYF1O75420 1035 aaPredicted RBP21.92■■□□□ 1.1
SUPT16H-205ENST00000556217 EDC4Q6P2E9 1401 aaKnown RBP21.91■■□□□ 1.1
SUPT16H-205ENST00000556217 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
SUPT16H-205ENST00000556217 MAP3K5Q99683 1374 aa21.9■■□□□ 1.1
SUPT16H-205ENST00000556217 GPR162Q16538 588 aa21.9■■□□□ 1.1
SUPT16H-205ENST00000556217 ANKRD24Q8TF21 1146 aa21.9■■□□□ 1.1
SUPT16H-205ENST00000556217 ACSBG1Q96GR2 724 aa21.9■■□□□ 1.1
SUPT16H-205ENST00000556217 BTAF1O14981 1849 aa21.9■■□□□ 1.1
SUPT16H-205ENST00000556217 CEP350Q5VT06 3117 aa21.89■■□□□ 1.09
SUPT16H-205ENST00000556217 SLC12A5Q9H2X9 1139 aa21.88■■□□□ 1.09
SUPT16H-205ENST00000556217 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
SUPT16H-205ENST00000556217 PUS7Q96PZ0 661 aaKnown RBP21.86■■□□□ 1.09
SUPT16H-205ENST00000556217 PAPPAQ13219 1627 aa21.85■■□□□ 1.09
SUPT16H-205ENST00000556217 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
SUPT16H-205ENST00000556217 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
SUPT16H-205ENST00000556217 IP6K1Q92551 441 aa21.82■■□□□ 1.08
SUPT16H-205ENST00000556217 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
SUPT16H-205ENST00000556217 SLC27A3Q5K4L6 730 aa21.79■■□□□ 1.08
SUPT16H-205ENST00000556217 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
SUPT16H-205ENST00000556217 QSER1Q2KHR3 1735 aa21.78■■□□□ 1.08
SUPT16H-205ENST00000556217 LTV1Q96GA3 475 aaPredicted RBP21.78■■□□□ 1.08
SUPT16H-205ENST00000556217 COG3Q96JB2 828 aa21.78■■□□□ 1.08
SUPT16H-205ENST00000556217 POLD1P28340 1107 aa21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 ZNF827Q17R98 1081 aa21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 KLHL34Q8N239 644 aa21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 SLC16A10Q8TF71 515 aa21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 LRRC4BQ9NT99 713 aa21.77■■□□□ 1.08
SUPT16H-205ENST00000556217 GOLGB1Q14789 3259 aaKnown RBP21.75■■□□□ 1.07
SUPT16H-205ENST00000556217 AMPHP49418 695 aa21.75■■□□□ 1.07
SUPT16H-205ENST00000556217 AKT1S1Q96B36 256 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms