RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 RIPK4P57078 832 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 KCTD17Q8N5Z5 321 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
SRSF5-212ENST00000556184 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 DIP2BQ9P265 1576 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 NSD3Q9BZ95 1437 aa13.13□□□□□ -0.31
SRSF5-212ENST00000556184 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
SRSF5-212ENST00000556184 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
SRSF5-212ENST00000556184 NUCB2P80303 420 aa13.12□□□□□ -0.31
SRSF5-212ENST00000556184 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
SRSF5-212ENST00000556184 SMC4Q9NTJ3 1288 aa13.12□□□□□ -0.31
SRSF5-212ENST00000556184 MTHFSP49914 203 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
SRSF5-212ENST00000556184 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
SRSF5-212ENST00000556184 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 CFAP70Q5T0N1 1121 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
SRSF5-212ENST00000556184 DEPDC5O75140 1603 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 TET3O43151 1660 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 ITPRIPQ8IWB1 547 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 CWC22Q9HCG8 908 aaKnown RBP13.1□□□□□ -0.31
SRSF5-212ENST00000556184 ABCC1P33527 1531 aa13.1□□□□□ -0.31
SRSF5-212ENST00000556184 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
SRSF5-212ENST00000556184 KIF13AQ9H1H9 1805 aa13.09□□□□□ -0.31
SRSF5-212ENST00000556184 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
SRSF5-212ENST00000556184 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
SRSF5-212ENST00000556184 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
SRSF5-212ENST00000556184 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
SRSF5-212ENST00000556184 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
SRSF5-212ENST00000556184 NOB1Q9ULX3 412 aaKnown RBP13.08□□□□□ -0.32
SRSF5-212ENST00000556184 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
SRSF5-212ENST00000556184 RABEP1Q15276 862 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 ABCA6Q8N139 1617 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 FANCAO15360 1455 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 ABCB7O75027 752 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 SSFA2P28290 1259 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
SRSF5-212ENST00000556184 MED14O60244 1454 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 KIF3BO15066 747 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 RAD21O60216 631 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
SRSF5-212ENST00000556184 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
SRSF5-212ENST00000556184 CFAP74Q9C0B2 1584 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 ADGRF5Q8IZF2 1346 aa13.06□□□□□ -0.32
SRSF5-212ENST00000556184 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
SRSF5-212ENST00000556184 TMPOP42166 694 aaKnown RBP13.05□□□□□ -0.32
SRSF5-212ENST00000556184 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■□□□□ 10.8
SRSF5-212ENST00000556184 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 LMBRD1Q9NUN5 540 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.05□□□□□ -0.32
SRSF5-212ENST00000556184 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 PIK3R4Q99570 1358 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 CD2BP2O95400 341 aaKnown RBP13.05□□□□□ -0.32
SRSF5-212ENST00000556184 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
SRSF5-212ENST00000556184 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 MTMR7Q9Y216 660 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 INO80Q9ULG1 1556 aaPredicted RBP13.04□□□□□ -0.32
SRSF5-212ENST00000556184 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
SRSF5-212ENST00000556184 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
SRSF5-212ENST00000556184 CDC45O75419 566 aa13.03□□□□□ -0.32
SRSF5-212ENST00000556184 CCDC39Q9UFE4 941 aa13.03□□□□□ -0.32
SRSF5-212ENST00000556184 R3HCC1Q9Y3T6 440 aaKnown RBP13.03□□□□□ -0.32
SRSF5-212ENST00000556184 SASS6Q6UVJ0 657 aa13.03□□□□□ -0.32
SRSF5-212ENST00000556184 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
SRSF5-212ENST00000556184 C14orf93Q9H972 538 aaKnown RBP13.03□□□□□ -0.32
SRSF5-212ENST00000556184 FAM117AQ9C073 453 aa13.02□□□□□ -0.32
SRSF5-212ENST00000556184 RBSNQ9H1K0 784 aa13.02□□□□□ -0.32
SRSF5-212ENST00000556184 UQCRHLA0A096LP55 91 aa13.02□□□□□ -0.33
SRSF5-212ENST00000556184 UQCRHP07919 91 aa13.02□□□□□ -0.33
SRSF5-212ENST00000556184 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.33
SRSF5-212ENST00000556184 ZFYVE16Q7Z3T8 1539 aa13.02□□□□□ -0.33
SRSF5-212ENST00000556184 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 NUBP1P53384 320 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 AEBP1Q8IUX7 1158 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 FAM13BQ9NYF5 915 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
SRSF5-212ENST00000556184 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
SRSF5-212ENST00000556184 MCTP1Q6DN14 999 aa13□□□□□ -0.33
SRSF5-212ENST00000556184 CAVIN1Q6NZI2 390 aaKnown RBP13□□□□□ -0.33
SRSF5-212ENST00000556184 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
SRSF5-212ENST00000556184 TNNT2P45379 298 aaPredicted RBP12.99□□□□□ -0.33
SRSF5-212ENST00000556184 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
SRSF5-212ENST00000556184 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
SRSF5-212ENST00000556184 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms