RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 MYOM1P52179 1685 aa12.26□□□□□ -0.45
NEK9-206ENST00000555537 UTRNP46939 3433 aa12.25□□□□□ -0.45
NEK9-206ENST00000555537 SLC15A2Q16348 729 aa12.25□□□□□ -0.45
NEK9-206ENST00000555537 STK32BQ9NY57 414 aa12.25□□□□□ -0.45
NEK9-206ENST00000555537 TOPAZ1Q8N9V7 1692 aa12.25□□□□□ -0.45
NEK9-206ENST00000555537 C1QTNF8P60827 252 aa12.24□□□□□ -0.45
NEK9-206ENST00000555537 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
NEK9-206ENST00000555537 STAC3Q96MF2 364 aa12.24□□□□□ -0.45
NEK9-206ENST00000555537 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
NEK9-206ENST00000555537 LRRC37A3O60309 1634 aa12.23□□□□□ -0.45
NEK9-206ENST00000555537 AATKQ6ZMQ8 1374 aa12.23□□□□□ -0.45
NEK9-206ENST00000555537 SOX12O15370 315 aa12.23□□□□□ -0.45
NEK9-206ENST00000555537 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
NEK9-206ENST00000555537 MTFR1LQ9H019 292 aa12.22□□□□□ -0.45
NEK9-206ENST00000555537 RGPD3A6NKT7 1758 aaPredicted RBP12.21□□□□□ -0.45
NEK9-206ENST00000555537 RGPD4Q7Z3J3 1758 aa12.21□□□□□ -0.45
NEK9-206ENST00000555537 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
NEK9-206ENST00000555537 EXOC5O00471 708 aa12.21□□□□□ -0.45
NEK9-206ENST00000555537 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
NEK9-206ENST00000555537 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
NEK9-206ENST00000555537 ARXQ96QS3 562 aa12.2□□□□□ -0.46
NEK9-206ENST00000555537 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
NEK9-206ENST00000555537 CARD10Q9BWT7 1032 aa12.19□□□□□ -0.46
NEK9-206ENST00000555537 COL18A1P39060 1754 aa12.19□□□□□ -0.46
NEK9-206ENST00000555537 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
NEK9-206ENST00000555537 GPR162Q16538 588 aa12.18□□□□□ -0.46
NEK9-206ENST00000555537 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
NEK9-206ENST00000555537 USP6P35125 1406 aa12.18□□□□□ -0.46
NEK9-206ENST00000555537 SLIT3O75094 1523 aa12.17□□□□□ -0.46
NEK9-206ENST00000555537 KLHL34Q8N239 644 aa12.17□□□□□ -0.46
NEK9-206ENST00000555537 BCL9O00512 1426 aa12.17□□□□□ -0.46
NEK9-206ENST00000555537 RGPD5Q99666 1765 aa12.17□□□□□ -0.46
NEK9-206ENST00000555537 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
NEK9-206ENST00000555537 ZNF827Q17R98 1081 aa12.16□□□□□ -0.46
NEK9-206ENST00000555537 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
NEK9-206ENST00000555537 BRD4O60885 1362 aaPredicted RBP12.16□□□□□ -0.46
NEK9-206ENST00000555537 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
NEK9-206ENST00000555537 CPSF1Q10570 1443 aaKnown RBP12.15□□□□□ -0.46
NEK9-206ENST00000555537 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
NEK9-206ENST00000555537 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
NEK9-206ENST00000555537 CHD4Q14839 1912 aa12.15□□□□□ -0.46
NEK9-206ENST00000555537 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
NEK9-206ENST00000555537 PIK3C2AO00443 1686 aa12.14□□□□□ -0.47
NEK9-206ENST00000555537 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
NEK9-206ENST00000555537 GIGYF1O75420 1035 aaPredicted RBP12.13□□□□□ -0.47
NEK9-206ENST00000555537 KCNQ4P56696 695 aa12.12□□□□□ -0.47
NEK9-206ENST00000555537 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
NEK9-206ENST00000555537 CCDC7Q96M83 1385 aa12.11□□□□□ -0.47
NEK9-206ENST00000555537 NLGN2Q8NFZ4 835 aa12.11□□□□□ -0.47
NEK9-206ENST00000555537 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
NEK9-206ENST00000555537 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
NEK9-206ENST00000555537 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
NEK9-206ENST00000555537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.1□□□□□ -0.47
NEK9-206ENST00000555537 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
NEK9-206ENST00000555537 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
NEK9-206ENST00000555537 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
NEK9-206ENST00000555537 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
NEK9-206ENST00000555537 IL2RBP14784 551 aa12.09□□□□□ -0.47
NEK9-206ENST00000555537 NHSQ6T4R5 1651 aa12.09□□□□□ -0.47
NEK9-206ENST00000555537 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
NEK9-206ENST00000555537 POLD1P28340 1107 aa12.08□□□□□ -0.48
NEK9-206ENST00000555537 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
NEK9-206ENST00000555537 PNPLA7Q6ZV29 1317 aa12.08□□□□□ -0.48
NEK9-206ENST00000555537 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
NEK9-206ENST00000555537 NFAT5O94916 1531 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 BTAF1O14981 1849 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 YBX3P16989 372 aaKnown RBP eCLIP12.07□□□□□ -0.48
NEK9-206ENST00000555537 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 ERBB3P21860 1342 aa12.07□□□□□ -0.48
NEK9-206ENST00000555537 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
NEK9-206ENST00000555537 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
NEK9-206ENST00000555537 NME9Q86XW9 330 aa12.06□□□□□ -0.48
NEK9-206ENST00000555537 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
NEK9-206ENST00000555537 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
NEK9-206ENST00000555537 GOLGB1Q14789 3259 aaKnown RBP12.05□□□□□ -0.48
NEK9-206ENST00000555537 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
NEK9-206ENST00000555537 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
NEK9-206ENST00000555537 MSH5O43196 834 aa12.04□□□□□ -0.48
NEK9-206ENST00000555537 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
NEK9-206ENST00000555537 SLC27A3Q5K4L6 730 aa12.04□□□□□ -0.48
NEK9-206ENST00000555537 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
NEK9-206ENST00000555537 ABCC6O95255 1503 aa12.04□□□□□ -0.48
NEK9-206ENST00000555537 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
NEK9-206ENST00000555537 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
NEK9-206ENST00000555537 GRIN3BO60391 1043 aa12.01□□□□□ -0.49
NEK9-206ENST00000555537 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
NEK9-206ENST00000555537 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
NEK9-206ENST00000555537 USP31Q70CQ4 1352 aa12.01□□□□□ -0.49
NEK9-206ENST00000555537 CEP350Q5VT06 3117 aa12□□□□□ -0.49
NEK9-206ENST00000555537 FBLN1P23142 703 aa12□□□□□ -0.49
NEK9-206ENST00000555537 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
NEK9-206ENST00000555537 SLC12A5Q9H2X9 1139 aa12□□□□□ -0.49
NEK9-206ENST00000555537 ATP10DQ9P241 1426 aa12□□□□□ -0.49
NEK9-206ENST00000555537 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
NEK9-206ENST00000555537 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
NEK9-206ENST00000555537 WWC3Q9ULE0 1092 aa11.99□□□□□ -0.49
NEK9-206ENST00000555537 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
NEK9-206ENST00000555537 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms